Oryzias melastigma (Indian medaka): 112160257
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Entry
112160257 CDS
T07439
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112160257
Transcription factors [BR:
oml03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
112160257
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
Motif
Other DBs
NCBI-GeneID:
112160257
NCBI-ProteinID:
XP_024150435
Ensembl:
ENSOMEG00000023136
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Position
LG23:266808..292776
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AA seq
622 aa
AA seq
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MSADGSDPAADKPADCGEEEEGSCTAGSSMPAVELPRKRKGDVEERSNTHAQHGLDCQMD
DDVSRSEGEDQQVKMKCFREPHRQIEKRRRDKMNNLIDELSAMIPACQPMARKLDKLTVL
RKAVQYLKSLKAGTSGAFTDTTCKPSILPHDDLWHLLLRTANGFLLVVRCDRAKILFISE
SVSKILNFSQLELTGQSLFDFIHPKDINKVKEQLSSSELLPRQRLIDASTGVQVPVEAPV
RTHHMSTGARRSFFCRMKHSRVAGKHEDKHALPNASKKKDGYRYCTLHCTGYMRSWPSSQ
LDPEGDAVDKDTSSMSCLVTMCRLHSHVSYQVPKDVKVRATEFVTRCAIDGKFTFVDQQA
TTVIGYLPQEVLGTSCYEYFHQDDLQHLAAKHRQVLRSKEKIETQSYKFKTKYGSYISLQ
SQWFTFTNPWTKEVEFIVSLNRVVPGPGHTKDEEAGASKALHEDTKPLSDIPGLSDSVGT
MIYAGSIGTQIANELIDTYRANSSPSSGSSSPFGPALEKCPQASKSASEPSETKALPVQA
RRDEEAGSSSQSQSGSRTDESVSGAASESTGETSQLDLEIMGVSGLSSFSSDEAAMAVIM
SLLETDVNMGQSGDFDDLHWPF
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgacggctcggacccggcggcggacaaaccggcagattgtggcgaggaggag
gagggatcgtgcacagcaggatcctcgatgccagctgtcgagctgccaagaaaacgaaag
ggagatgtcgaggagaggtcaaacacccacgcgcagcacggcctcgactgccaaatggac
gatgacgtcagcagatctgaaggcgaggatcagcaggtcaaaatgaaatgtttcagggag
cctcaccgccagattgagaagcggcgacgagacaaaatgaacaatctcatcgacgagctg
tccgccatgatccccgcttgtcagcccatggcgcgaaaacttgacaagctaaccgtgtta
cggaaagccgtccagtatctgaaatccctcaaagctgggacgagcggcgccttcacagac
accacctgcaagccttcgatcctgccccatgatgacctctggcacctgctgctccggacg
gctaacggcttcctgttagtcgtgagatgcgatcgcgctaaaatcctcttcatctcagag
tccgtctccaagatcctcaacttcagtcagttggagttgaccggccagagcttgttcgac
ttcattcaccccaaagacatcaacaaagtaaaggagcagctgtcgtcctcagagttgctc
cctcgccagcgcctcatcgatgcatcgactggagttcaggtcccggtggaggcccccgtc
agaacccaccacatgtccaccggagctcgccgctccttcttctgccgcatgaagcacagc
cgggttgcagggaagcacgaggacaagcacgcactgcccaacgcctccaaaaagaaagac
ggttacagatactgcacgctgcactgcaccggatacatgcgcagctggcccagcagccag
ctggacccggagggcgacgccgtcgacaaggacacctccagcatgagttgcctggtgacc
atgtgccgcctccactcccacgtgtcctaccaggtccccaaagacgtcaaagtccgagcc
acagagtttgttacccgctgtgcaatcgacggcaagttcacttttgtagatcagcaagcc
actacggttatcggctatctgcctcaggaggttctcggcacatcctgctacgaatacttc
catcaggacgacctgcagcacctggcagccaaacacagacaagttcttcgaagcaaagag
aagatcgagacgcagagctacaagttcaagactaaatacggatcctacatttccctccaa
agtcagtggtttaccttcaccaacccgtggaccaaagaagtggaatttattgtgtcttta
aacagggttgtcccggggcccggtcacaccaaggatgaggaggcgggagcttcaaaagca
cttcatgaagacaccaagccgcttagtgacatccccggcctctccgacagcgtcggcacc
atgatttacgcaggaagcatcgggacgcaaatcgctaacgagctcatcgacacctataga
gcaaactcgtctccatcaagtgggtcttcaagtcctttcggccccgcgctggagaaatgt
ccgcaggccagcaagagcgccagtgagccgtcggagaccaaagcacttcctgttcaggcg
agaagagacgaggaagcgggcagctcttcacagtctcagtcgggctccaggacagatgaa
agtgtgagcggtgcggcatcagagagcacaggcgagacctcccagctggacctggagatc
atgggggtttcggggctgagcagcttcagcagcgacgaggcagccatggcggtcatcatg
agcctgctggagacggacgtgaacatgggtcaatcgggggactttgacgaccttcactgg
cctttttag
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