Oryzias melastigma (Indian medaka): 112160350
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Entry
112160350 CDS
T07439
Symbol
pabpn1l
Name
(RefSeq) embryonic polyadenylate-binding protein 2 isoform X1
KO
K14396
polyadenylate-binding protein 2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112160350 (pabpn1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112160350 (pabpn1l)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
112160350 (pabpn1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
112160350
NCBI-ProteinID:
XP_024150579
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All DBs
Position
LG3:complement(14804529..14807555)
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AA seq
260 aa
AA seq
DB search
MADHDMEYRYLEGEAMNENITEDPELMAIKARVQELEMEEQTERMKEEEDRCDAEEMHSG
SQPGPFYNMTPEERIDADNRSVYVGNVDYGATADELEIHFNGCGPVNRVTILCDRFSGHP
KGFAYIEFSDRSSAQSAVGLHETMFRGRVLKVLPKRTNMPGISTTDRGGHRGSHTRGRGS
SHRPPRYQNGFRGRFRYQSTRPQHQAPHPYYQGASGGKRQWGHTEYNDQTSKRYPCLLLI
TPPSEEVGSGSNGQHYPQQR
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcatgatatggagtaccgctacctcgagggcgaggccatgaatgagaacatc
accgaggacccggaacttatggccattaaagccagggttcaagagttggagatggaagaa
cagacggagagaatgaaagaagaggaggaccgatgtgatgcagaggagatgcacagcggc
tctcaacctgggcctttctacaacatgactcctgaagagaggatagatgcagacaacaga
tcagtctatgtggggaatgtggactatggagccactgcagatgagctggagatccatttc
aatggttgtggtcctgtcaacagagtaacgattctgtgcgacaggttctctgggcatcct
aaaggttttgcctacattgaattctccgatcgaagctccgcgcagagtgctgttggtctg
catgaaacaatgttcagaggaagagtccttaaggtattgcccaaaagaaccaatatgcca
gggattagcaccactgacaggggaggacacagagggagtcacaccagagggagaggaagc
agccaccgtcctcctagatatcaaaatggctttcgaggcagatttcggtaccagtcaaca
aggccacagcaccaagccccccatccttattaccagggagcttctggggggaaaagacag
tggggccacactgagtacaacgaccaaacatcaaagcgctacccatgtctcctcctcatc
acgccgccctcagaagaagtggggtcgggatctaacggacagcactacccacagcagcgc
tag
DBGET
integrated database retrieval system
