Oryzias melastigma (Indian medaka): 112160368
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Entry
112160368 CDS
T07439
Name
(RefSeq) collagen and calcium-binding EGF domain-containing protein 1 isoform X1
KO
K19638
collagen and calcium-binding EGF domain-containing protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
112160368
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Gene cluster
GFIT
Motif
Pfam:
Collagen
cEGF
FXa_inhibition
EGF_CA
EGF_3
EGF
Motif
Other DBs
NCBI-GeneID:
112160368
NCBI-ProteinID:
XP_024150604
Ensembl:
ENSOMEG00000017458
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Position
LG3:complement(28865869..28901091)
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AA seq
388 aa
AA seq
DB search
MGQINGATLLPLGAICAVFLWESGASSIRTTFTVDTSRTTECPDNKILTVEYSCVRAGGK
NGTCLRRKCCDGFRFVMGQCIPESVDVCAASPCEQQCTDNFGRVVCTCYPGYRFDRERHR
THKSPYCLDIDECEASGGDVCDHECLNTMGSFLCRCHSGYILASDQRSCIPVHNLSSSGK
SDTLMSAGTCSLTCQDFMNMKNSLLQIKLRLGNAPSANQVPGLANSSDKPSLGRAGKSPD
TPCLPGLPGPPGAPGVPGHPGEPGNRGETGERGPPGPRGPRGDMGPMGPEPDLRHIKRGR
RGPVGPPGAPGRDGLKGDRGAPGLRGPPGPPGSFDFLLLMMADIRNDIIELQEKVFGERR
GLSLDNPQSSGEVEFEDWGSGEDLTLNT
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagattaatggtgcgactctgttacctttgggggcgatctgtgctgttttcctg
tgggaatctggtgccagctccatcaggacgacgttcaccgtggacacatcgaggacaacg
gagtgtccggataacaaaatcctgactgtggagtattcttgtgtcagagctggcgggaag
aatggcacttgcttgaggagaaagtgctgtgacgggttcaggtttgtgatgggacagtgc
atacctgaaagcgtggatgtgtgcgccgcctccccctgcgagcagcagtgcacagacaac
tttggacgagtcgtctgcacgtgttaccccgggtatcgctttgaccgcgagcgacatcgc
actcataaatctccttactgcctcgacatcgatgagtgtgaagcctccggcggcgatgtg
tgcgaccacgagtgcctgaacacaatgggaagctttttgtgccgctgccacagtggttac
atcctggcatccgaccagcgttcctgcatccccgttcacaacttgagctcctcaggaaag
tccgacaccttgatgagcgctggcacctgctcactgacctgccaggacttcatgaacatg
aaaaacagtcttctccagataaaactgcggctgggaaatgcgccgtcagccaaccaggtt
cctggtctggccaacagcagtgataaaccctctctgggacgtgcaggaaaaagtcctgat
accccgtgtcttcctggtttacccggccccccaggagctcctggggttccaggacatcct
ggagagcctggaaacagaggagaaactggggagaggggtcctcctggccctcggggtccg
aggggggatatggggccaatgggaccagagcctgacctgagacatataaagaggggtcgc
aggggcccagtgggtccgcctggagcgccaggaagagacggattgaagggtgatagagga
gctccaggtctcagaggtccgcctggaccacccggctccttcgacttccttctgctcatg
atggccgacatacgcaacgacatcatcgagctgcaggagaaggtgttcggcgagcggcga
ggcctctctctggacaatcctcagtccagcggagaagtggaatttgaagattggggttct
ggagaagatcttaccctcaacacctga
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