Oryzias melastigma (Indian medaka): 112160371
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Entry
112160371 CDS
T07439
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112160371 (vps28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112160371 (vps28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oml04147
]
112160371 (vps28)
Membrane trafficking [BR:
oml04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
112160371 (vps28)
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112160371 (vps28)
Exosomal proteins of other body fluids (saliva and urine)
112160371 (vps28)
Exosomal proteins of colorectal cancer cells
112160371 (vps28)
Exosomal proteins of bladder cancer cells
112160371 (vps28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
112160371
NCBI-ProteinID:
XP_024150612
Ensembl:
ENSOMEG00000011875
UniProt:
A0A3B3BYF9
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All DBs
Position
LG11:complement(15995343..15999097)
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AA seq
223 aa
AA seq
DB search
MFHGIPGTGGIGGAPANKPELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKAYIKD
CVTPNEYTGSCSRLLVQYKAAFKQVQGSDVGSIDDFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDSEAKDK
VNLWLTTLSSMSASDELDDNQVRQMLFDLESAYNAFNRFLHSS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtttcatgggataccaggtacaggaggaataggtggagctccagccaataaacctgag
ctgtatgaggaagtgaagctatacaaaaatgccagggaaagagaaaagtacgacaacatg
gcagagttgtttgctgttgtaaagactctgcaggccctggaaaaggcttacatcaaagac
tgcgtaacacccaatgagtacactggctcctgttcaagactcttggttcagtataaagct
gctttcaagcaggtgcagggatccgatgtgggctccattgatgatttttgcaggaagtac
agactcgactgtccacttgcaatggagaggatcaaggaggatcggcctatcaccatcaag
gatgacaagggcaacctcaatcgctgcattgcagatatagtctctcttttcatcactgtt
atggacaaactcagactggagatcagagccatggatgaaattcaaccagacctgagagag
ctgatggaaaccatgaatagaatgagcaacatgcctccagactcagaggctaaggacaaa
gtcaatctgtggctgaccacactcagcagcatgtctgcctcagatgagctggatgataat
caggttcgccagatgctgttcgatctggagtcggcctacaatgccttcaaccgcttcctg
cactcttcctaa
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integrated database retrieval system
