Oryzias melastigma (Indian medaka): 112160399
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Entry
112160399 CDS
T07439
Symbol
chs1
Name
(RefSeq) chitin synthase 1
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00520
Amino sugar and nucleotide sugar metabolism
oml01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
112160399 (chs1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oml01003
]
112160399 (chs1)
Enzymes [BR:
oml01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
112160399 (chs1)
Glycosyltransferases [BR:
oml01003
]
Polysaccharide
Structural polysaccharide
112160399 (chs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chitin_synth_2
Glyco_trans_2_3
ChitinSynthase_IV_N
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
112160399
NCBI-ProteinID:
XP_024150646
Ensembl:
ENSOMEG00000004501
LinkDB
All DBs
Position
LG3:21257240..21276663
Genome browser
AA seq
1440 aa
AA seq
DB search
MTDDMKHRGKKREGRHRDTWDPFQLNPVGAEKEKKNGCFAIAQYLVAVIVGIAVLVSAVI
AKGSLLVLSTLSSPIYVKTGHDSSGRPTFKQEYDQDRQFYMLMLVFCLVWPNFMVFFKCL
WKIMFKSFVKPNMKTMAMICVIECVVSLGTSVLVLVVMPKFDILTNLFISGGVCIVSAIM
QIIFKLQRETWKIVFPICSLFFTITGYCLLGVDFYVRQELYVNGEKPSPYLYVGVGIFAS
LLISICWWENTLQATNRMQKTLSELERFRDFVFVISSILRILVIGAVYLLYHKAINPQNI
IWSDYNLGGQKWQILRTGLVLFFLQAFCSAACHWFGVVACKIHAVRLSFALPLCSTGPAV
LGLGLILFMTEASKLDTGSTDSITDFCLSLRGMGNENATLIMLEITRSICQTTLNSHYLQ
WPFSMLALEGVCMWLGLVSCTYYVWKTKVQRIERTSQLFVRRLYESAFIDLSMLLNTKMK
LPKAESNESQDDLQNTMIYLCATMWHETYDEMLKILTSMFRLDRYRGDPKEEHKDAFDFE
SHIFVDDAFMTDKETQHRLVNEYVEDLIKVVIEVYRVFTNKEPDDVSIVDTPYGGRLMFV
LPDGNMLYIHLKDKSLIRNKKRWSQIMYMYYLLGWKGYIVKNPHKLPRQNNTRDSLISMD
GEMFLLPQFDNDHKRKFISEDNTYILALDGDTDFHPKAVILLVDRLRMYDNVGAACGRIH
PTGMGPMVWYQKFEYAVGHWLQKTAEHVFGSVLCSPGCFSLFRGSALMDDHVLKRYTTTS
SNASDYVQYDQGEDRWLCTLLLQQGWRVEYNAASDAYTNSPQEFKEFYNQRRRWGPSTLA
NTLDLLHSGPETVKRNSSISRLYIFYQMFAVGSSILGPASVTLMIAGAFQFIFKMAGTLS
IIVASIPPVIYIIICFIVKPNTQITIAGIMSVLYAFLMTASFFSIIGDMVIQETFLTPTG
LFLVSMAIMYFVTALLHPQEFGMIIYGLMYFICIPSGYLLLTIYSLVNMNIVTWGTRESK
EEGEVKKNHNMVCNRDCRLCCWDWKIQITQESENPMFQQIMSQGAHGAPLLKPTTNDKAL
PAPSTDPQTKPQDDAKKEKEEEVKKVEAGKQKKKKDSGVARSDSSGSFEKRDTDSSSSDD
SSDDESDKEENKKISKFGELEEVSEDSFKEWVKPVREEFLKKLTFANMKRNLQEQIRYAL
RKNSNYDEVCEDLVLMLTDTLNVELSDVGPETTLTPVQLDNVQFQLTKQARQVLKTNRMM
KLEKKVKRAIEKTLSAPQVQRLDEGEQDFWVKLIERYLTPITETPEHKKMITKELKSLRN
RAVFLYFILNLLWVVATFFLQAIGNDVISIKIPKYFTNGTETGEFLKVEPLSLMFLLSFA
VLLLVQFLAMLYHRVYTLIHVVSYRSSEKNYKERSDDEEDDEDDVIGNQYALSITTEDSF
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgacggatgacatgaaacacagaggaaagaagagggaaggaagacacagggatacatgg
gatccattccaactgaacccagtcggagctgaaaaagagaagaagaacggttgtttcgca
atcgctcaatacctggtggctgttattgtgggcatagcagttttagtcagtgccgtcatt
gcaaagggatccctgttggtgttgtcaactttgtccagtccaatttacgtcaaaactgga
cacgacagctcaggtcggcccacattcaaacaagagtacgaccaggaccgacagttctac
atgctgatgctggtgttctgtctggtctggcccaacttcatggtctttttcaaatgtctg
tggaagattatgttcaaaagctttgtgaagcccaacatgaagaccatggcaatgatctgc
gtcattgagtgtgtggtgtctcttggtacctcagtcctggtgctcgttgttatgccaaag
ttcgacatactcaccaacctcttcatcagtggaggagtctgcatcgtttctgcaataatg
caaatcatcttcaaactacaaagagaaacttggaagatcgtgttcccaatctgctcactc
tttttcaccatcactgggtactgccttcttggagttgacttctacgtccgccaggaatta
tatgtcaacggcgaaaagccttctccgtatttatatgtgggagttggaatttttgcatca
cttctgatctccatctgctggtgggagaacactctgcaggccacaaaccgtatgcagaaa
acactgtcagagctggaacgtttcagggactttgtctttgtgatcagcagcattttgagg
atacttgtcattggtgcggtttacctgctgtaccacaaagctattaacccccaaaatatt
atctggagtgactataacttaggtggacaaaaatggcaaatcttgagaacaggactggtg
ctgtttttcttacaggctttctgctcagcagcctgccactggtttggtgttgtggcctgc
aagatccatgctgtcagactgagttttgcactccccctgtgcagcacaggacctgcagtg
ctggggttgggcctgatacttttcatgacggaggcatccaaactggatacaggaagtaca
gattctatcactgacttttgcttgagcttaagaggcatgggaaacgaaaacgcaactttg
atcatgctggagataaccaggagcatctgtcagaccaccctcaacagtcactacttgcaa
tggccgttctcaatgctggccctggagggagtgtgtatgtggttaggcttggtctcatgt
acctactacgtatggaaaactaaggtccagcgcattgagagaacctctcagctctttgtt
cggcgcctctatgaatcagctttcattgatttgtccatgctgctcaacacaaagatgaag
ctgccaaaggctgaaagtaacgaaagccaagacgaccttcagaacaccatgatctacctc
tgtgccaccatgtggcatgagacttatgatgaaatgttgaagattcttacctccatgttc
aggttggatcgatatcgaggcgatccaaaggaggaacacaaggatgcttttgactttgag
tctcacatttttgtagacgacgccttcatgactgacaaggaaacacagcacagactggtg
aacgaatacgtggaagacttgatcaaagttgtgatagaggtttatagagtttttaccaac
aaagagccagacgatgtttcaattgtggatactccttatggtggaagattgatgtttgtc
ttgccagacggaaacatgctttacattcatttgaaagacaaaagtctcatcaggaacaag
aaaagatggtctcagatcatgtacatgtattatctgctgggctggaaaggctacattgtc
aagaaccctcacaagttaccgcgtcagaacaacacgagagacagcttgatctccatggat
ggcgagatgttcctgctacctcagtttgacaatgaccacaagagaaagttcatctcagag
gacaacacgtacatcctggctctggatggggacactgactttcaccctaaagctgtcatt
ctgcttgtggacaggttgaggatgtatgacaatgttggagcagcatgtggaagaatccat
ccgactgggatgggtccaatggtgtggtaccagaagttcgaatatgccgtgggccactgg
cttcagaaaacagcagaacacgtgtttggttctgtgctttgcagcccaggatgcttcagt
ttgttcagaggttctgctttaatggatgaccacgtcttgaaaagatacacaacgacctct
tccaatgcctccgactacgtacaatatgatcaaggagaggatcgttggctctgtacttta
ctgctgcagcaaggatggcgtgttgaatacaatgctgcatcggacgcttacaccaactcg
ccacaggaattcaaagagttttacaaccagaggagacgatggggcccatccacactggca
aacacactggaccttttgcacagcggtccagagacagtgaagaggaactcctccatctcc
aggctttacatcttctaccagatgtttgcagtgggatcctccatcctgggcccagcctct
gtcactttgatgatagctggtgcttttcagttcatcttcaaaatggctggcacactatcc
atcatcgtggccagcatccctcctgtgatctacattattatctgcttcatcgtcaagccc
aacactcaaatcacaatcgctggcattatgagtgtgctgtatgcctttctcatgacagcc
tctttcttctccatcattggcgacatggtgatccaagaaaccttcttgacccccactggc
ttatttttggtttctatggccatcatgtactttgtgacggctttgcttcacccacaagag
tttgggatgattatctatggtctgatgtatttcatctgtatccccagtggatacctccta
ctgaccatctactcactggttaacatgaacattgtgacttggggcacacgagaatccaag
gaagaaggtgaagtaaagaaaaaccacaatatggtgtgcaacagagactgcagactctgc
tgctgggactggaagatacaaattacccaggagtcagagaacccaatgtttcagcagatc
atgagtcagggtgcacatggagcacctttgctcaaacccaccaccaatgacaaggctctg
ccggccccgagcacagatcctcagaccaaacctcaagacgacgcaaagaaggaaaaagaa
gaggaggtgaaaaaagtagaagcgggaaaacaaaaaaagaagaaagacagcggagtggct
cggagtgacagcagtggcagttttgagaagagggacaccgattcgagctcatctgatgac
tctagtgatgatgaaagtgataaggaggaaaacaaaaagatctcaaaatttggtgaattg
gaggaagtgtcagaggattctttcaaggagtgggtgaagccagtgagggaggagtttttg
aagaagctgacttttgccaacatgaagaggaatctacaagaacaaatccgatatgcactc
cgcaaaaactcaaactatgatgaagtgtgtgaagacttggttctcatgttgaccgacact
ctgaacgtggagctgagtgacgtggggcctgagactactttaacaccagttcagcttgac
aacgtacaatttcaattgacaaaacaggcccgacaagtcctcaaaaccaaccgaatgatg
aaattggagaagaaggtgaaaagagccattgagaaaactctgtctgctccgcaggtgcaa
cgactggatgaaggggaacaggacttctgggtcaagctcattgagcgctacctgacgcca
attacagagacacctgaacacaagaagatgatcaccaaggagctaaagtcactacgtaac
agggccgttttcttgtatttcatcctcaatttgctgtgggtggtggcaaccttcttcctg
caagctattggcaacgacgtcatcagcatcaagatccccaaatattttacaaatggaact
gaaaccggggaattcctcaaggtggagcccctcagtttgatgttcttgctgtcctttgct
gttcttctccttgtccagtttctggccatgttgtaccacagagtctacaccctcatccat
gtggtttcatatcgcagctcagagaagaactacaaggaaaggagtgatgatgaagaggat
gatgaggatgatgtcataggaaaccaatatgctctgtcaattaccacagaggatagtttt
taa
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