Oryzias melastigma (Indian medaka): 112160400
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Entry
112160400 CDS
T07439
Symbol
psmc3
Name
(RefSeq) 26S proteasome regulatory subunit 6A
KO
K03065
26S proteasome regulatory subunit T5
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
112160400 (psmc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
oml03051
]
112160400 (psmc3)
Proteasome [BR:
oml03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
112160400 (psmc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_5
nSTAND3
AAA_16
RuvB_N
AAA_2
AAA_22
DUF815
DUF5827
Mg_chelatase
AAA_33
PhoH
CCDC22_CC
AAA_7
AAA_14
ATPase
AAA_28
Sigma54_activat
IstB_IS21
RNA_helicase
AAA_24
AAA_11
Defensin
Motif
Other DBs
NCBI-GeneID:
112160400
NCBI-ProteinID:
XP_024150647
Ensembl:
ENSOMEG00000005432
LinkDB
All DBs
Position
LG3:21625612..21627192
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AA seq
427 aa
AA seq
DB search
MASLSDKSVWDEVEDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDK
IKENTEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANVDLDSQRKGKCAVIKTSTRQTY
FLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLD
KQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLA
GPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLE
LLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK
MNVSLDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDYMEGILEVQAKKK
ANLQYYA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgctgagtgacaaatcagtttgggacgaggtggaagatggaatcggagaagaa
gtgttaaaaatgtccacagaggagatagttcagcgcactcgtctcctcgacagcgagata
aagataatgaagagcgaagtgcttcgggtaactcacgagctccaggccatgaaggataaa
atcaaagaaaacacggagaagataaaggtgaacaaaactcttccgtacttggtttccaac
gtgatcgagctgctggatgtggaccccaacgaccaagaggaagatggggcaaatgtggat
ttggattcccagagaaaaggaaagtgcgctgtcattaaaacctccaccaggcagacctac
ttcctgccggtaatcgggctggtagacgccgagaagctgaaacctggagatcttgttggg
gtcaacaaagactcctacctgatcctggagaccttgcccactgagtacgactccagagtc
aaagccatggaggtggatgagcgtcccactgaacagtacagcgacataggcggccttgat
aagcagatccaggagctggtggaggctatagtcttgcctatgaaccacaaggagaagttt
gagaacctgggtatccagccacccaaaggggtcctcatgtatggtccacctggtacagga
aaaaccctcctggccagggcctgtgctgctcagaccaaagctaccttcctaaagctggca
ggtccacagttggttcagatgtttattggagatggagccaagctggtcagagatgccttc
gctcttgctaaagagaaagctccgtccatcatcttcattgatgaactggatgccattgga
acaaagaggtttgacagcgagaaagcaggagatcgtgaggtgcagaggaccatgctggag
ctgctcaaccagcttgatggttttcagcccaacatgcaggtcaaggtgattgctgccacc
aacagagtggacatcctggaccctgctctgcttcgctcaggtcggctcgacaggaagatc
gagttccccatgccaaatgaagaggctagagcccgcatcatgcagattcactcccgcaag
atgaatgtcagtcttgatgtcaattatgaggagctggctcgctgcacggatgacttcaac
ggcgctcagtgcaaggctgtgtgcgtggaggctggtatgatcgctctgcgtcgcggcgcc
accgagctcaaccatgaagattacatggagggaatcctggaggtccaagccaagaagaag
gccaaccttcagtactacgcttaa
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