Oryzias melastigma (Indian medaka): 112160432
Help
Entry
112160432 CDS
T07439
Symbol
dmxl2
Name
(RefSeq) dmX-like protein 2 isoform X1
KO
K24155
rabconnectin-3a
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112160432 (dmxl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112160432 (dmxl2)
Membrane trafficking [BR:
oml04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112160432 (dmxl2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
112160432 (dmxl2)
RAVE complex
112160432 (dmxl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
WDR55
Beta-prop_IFT140_1st
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
NBCH_WD40
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
112160432
NCBI-ProteinID:
XP_024150683
Ensembl:
ENSOMEG00000000249
LinkDB
All DBs
Position
LG3:10940570..10985791
Genome browser
AA seq
3056 aa
AA seq
DB search
MHLHQVLTGAVNPGDCCYSVGSVNDIPFTAYGSGCDVVILASDFDCVQIIPGAQNGNIQV
GCVECSQQLGRIAASYGNTVCIFEPLSTNPSKLHKQINYQWQKTGQFFLDAITYNLAWDP
QGNRILAATERLQLWAPPLRDALIEEEDGQVNEDKPHPVLSDWNCVWQCKTAASVHIAKW
SPDGEYFATVGKDDCLLKVWYPTTGWRSAVVVQDPSDKKPSPVHFSFVYLAHPRSVTGMS
WRKTSKYMPKGSVCNVLLTSCEDGVCRLWSETLLPEDSLLGGQISDNSQSFTSSLPGLGG
NKDKIQHALESIHHLKQLRRGRRRSSALVAHSDLLPSQLGTQDSHTHRHIAHHANALCHF
HISASINPNTDIPSMLADSGLFNPEDSTGGGGFMVHWLNNKDLSFTSSMDLFMTQLRKLS
EQQLDQTTEEPVEPGGSPLKFDFDLDEMSDKASSEHGEEAESGEQGSNKASSPGSSSSMP
LPSMLLERKIETLTTEWNKSPDMLFTIHPIDGSFLVWHVKYLDEFNQGIFRQVQVSFSSR
IPVAFPAGDANSLSKNILMYACTLTESESVGTGEQGRMVQRVSRSASVSACLGSPAVSPS
PKLRPGISPAVMMVSKHVDGSLNQWAVTFAERSGFSNVLTVSHKFRYCGHRFHLNDQACH
TVLPLLLTTSHHNALLTPPSAPSSLEGEQLPTFPLPKGLPRKQLRNAATRTFHDPNAIYS
ELILWRVDHIGPLSCTGGVSELARINSLHTSAFSNVAWLPTLVPSSVLGTYCNSASACFV
ASDGKNLRLYQAVVDARKLLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDIITNQC
GSNTQLLHVFQEDFILGYKPQKEPEAFIPAFPSGEDYQPAPFSEKFFLVVIEKDLNRNSV
LQMWHLHLQSVQACVDEPSPDYSFQSQLMVPNQAMNADSSPETSPVRPLPRSTSTANLQS
ASKLILSSKLVYSRRLDLPHGVEVTRATPSGGHLSSSSIYPVCLAPYLIVTTCSDSRVRF
WRCAVEGDVESGGDKQDNRAYAWEPWVLMNEEEDNNSAVCVSGRPVAVSCSYIGRLAVAF
KQPRSGQLHGSLEDFSMHVSIYECESTGGSEWVLEQTLHLDDFVRPSSTLDSRVSVDSNL
FVYSRSDLYMSRDHSSPNIKHFVHLDWLSKEDGSHILTVGVGSNILMYGRISGVVNEQTS
SKEGMAVITLPLGGSIKQGIRSRWVLLRSVDLLSSVDGTPSLPVSLSWVRDGILVIGMDC
EMHVYAQWHQDKKPGEGEDGNASTADIAGGQAVGSSSASEGRARSKSVFEGSAGVDEALR
APAGLQEGGLFEAAHSLSPTLPQYHPTQLLELMDLGKVRRAKAILAHLVKCIAGEVAVVR
DVEAGEGGGRRHLSRTISVTGSTAKDTIVSGRDGGRDYTEINSIPPLPLYSLMLADLDTS
YKAEEASKGSKVADGEVVQKSTEDQYADLFQVPAVTTDDFVNFATDKPEKKSRVINLSQY
GPTYFGPEHAQVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSAEVTSSPEQQYTGGEA
LDECGLRYLLAMRLHTCLLTSLPPLYRMQLLHQGLSTCHFAWAFHSEAEEELLNMIPAMQ
RGDPQWSELRAVGVGWWIRNINTLRKMVEKLGKAAFQRNNDPLDAALFYLAMKKKAVLWG
LFRSQHDEKMTQFFKNSFTEDRWRKAALKNAFSLLGKQRFEQAAGFFLLAGSLKDAIEVL
IEKMEDLQLAMIVARLYEADFESSSTCQGLLYEKVLGCNRDGSGYHCSRLHPDPFLRSIA
YWIMKDYTQALDTLLERIPKEDDENPNVMVKACNPVVFSFYNYLRTHPLIIRRHFANPEG
ATATVGLTAEKSGADEINLIERKLFFTTANAHFKVGCPVLALEVLSKIPRVSKKSGSSAL
SKASSKVNVNASQPLENGTQGGMDWSSSAASSHAWGGNDSSGGMDWSQPAVKVEEDDLKL
DWGEDKDEEEDDDDDGLTMKKAEPENKGDEGPKLQREDSQAESEVDVIAEQLKFRACLKI
LMTELRTLATGFEVDGGKLRFQLYNWLEKEIAAMHKICNYKVEGKEEGAEVERWRDRTAS
VDISDEAFESTEAGAYERHQMERRRLQAKQQHSERRKAWLRKNQALLRVFLSYCSLHGAK
GGGVTSVRMELLFLLQESQQETTVKQLQSPLPLPTTLPLLSACIAPTKTVIANPVLHLSN
HIHDILHTTTMMLVPPHPGFMDDRVNTVHTLAASLSACVYQALCDSHSYSNNQTEANQFT
GMVYQGLLLSERKRLRTESIEEHVTPNSAPAQWPGVSSLISLLTSAREEDQPRLNVLLCE
AVVAVYVSLLIHGLGTHNSNELFRLAAHPLNNRMWAAVFGGGAKVIIKPKRPELPPAPTQ
APAEDVDRHRRRFNMRMLVPGRPVKEAPATPPPVPAERPTYREKFIPPELSMWDYFVAKP
FLPLSDSNALYDSDESGAEDDEDDDDAFLSDTQITEHSDPNSYSWALIRLVMVKLAHHNV
KNFIPLTGVDLTDLPVSSPLCNAVLKSLENWEQLLLERISKFDGPPPNYINTYPTDLSSG
AGPAILRHKAMLEPDNTPFKTKNHQSFPVRRLWHFLVKQEVLQETFIRYIFTKKRKQSES
LENHVDRINPNSIAGASNPYKVEADLGYPGGKAKIIHKESDIIMAFAINKANSNEIVLAS
THDVQEVDVSNLVAVQPYTWIGEDFDKESCSSDDIDHRSSHTNIAQTSSVSFAPPPMSVS
ASMPWLGSGQTSMGASVIMKRNLNNVKRMTSHPIYQYYMTGAQDGSVRMFEWNRPQQLIC
FRQAGNARVTRLYFNSQGNKCGVADGEGFLSLWQVNQTSSNPKPYLSWQCHTKACCDFAF
ITSSSLIATAGQSNDNRNVCLWDTLISPNNTIVHAFPCHENGATVLQYAPKQQLLITGGR
KGFVCVFDIRQRQLLHTFQAHDSAIKALALDAYEDFFVTGSAEGNMKVWKLAGHGLMHSF
STEHAKQSIFRNIGAGVMQVETCPGNRIFTCGADGTLKMRVLPDSYNIPSSLVDIL
NT seq
9171 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgcaccaagtgctgacgggagctgtaaaccctggagactgctgctactcggtg
ggaagcgtaaatgatattcctttcacggcttatggctcaggttgtgacgttgtgatcttg
gctagcgactttgactgcgttcagatcattcccggtgctcagaatggaaacatacaggtt
ggctgtgtggagtgctcccaacagcttggcaggattgctgcctcctacggaaacacagtc
tgcatttttgaacctctttctacaaacccaagtaaactccacaagcagattaactatcaa
tggcaaaagacaggacagttcttccttgatgccatcacctacaacttggcctgggatcca
caagggaaccgtatcctggcagcaacggagcgactccagctgtgggctccaccattgaga
gatgccctcatagaggaggaggatgggcaggtgaatgaggacaagccccacccggtcctc
agtgactggaactgtgtctggcagtgcaagactgcggcgtctgttcacatcgccaagtgg
tctcctgatggggagtactttgcaacagttgggaaggatgactgcttactcaaggtttgg
tatcccaccactggctggcggtcagcggtggttgtccaggacccgtctgataaaaagcct
tctccagttcacttttcctttgtttacctggcacatcctcggtctgttaccggcatgtca
tggaggaagactagcaaatacatgcccaagggatctgtgtgcaatgtgctgctgacgtcc
tgtgaagatggggtgtgtcggttgtggtcagaaaccctcttaccagaagacagtcttctt
ggtgggcagatctctgataacagtcagtccttcacctccagcctgccaggtctgggaggc
aataaagacaagatccagcatgctttggagtcgattcaccacctaaagcagctgcgccga
ggccgccgccgatcgtccgctctggtagctcacagtgacctccttccatcccagctcggc
acacaggactcacatacccaccgccacatcgcacatcatgccaatgctctctgtcatttt
cacatctctgctagtattaacccaaacacagacatcccatcaatgctagctgactctggt
ttgttcaatcctgaagatagtacaggtggtggaggtttcatggttcactggctcaacaat
aaagacctcagcttcacttcctctatggacctctttatgacgcagcttcgaaagttgtct
gaacagcagttagatcaaacaacggaagaacccgtggaacccgggggatccccattaaag
tttgactttgatttggatgaaatgtctgacaaagcttcatcggagcacggagaagaggca
gaatcaggggagcaaggaagcaacaaggcctcatcccctgggtccagctccagcatgcct
ttgccgtccatgctgctcgaaaggaagatagagactctgaccacagaatggaacaagagt
cctgacatgctgtttaccatccatcccatcgatggctccttccttgtttggcatgtgaag
tacttagatgagttcaaccagggaatcttcagacaggttcaggtgtccttctcatcgcgc
attccagtagcttttcctgcaggtgacgccaactctttgagcaaaaatatcctgatgtac
gcctgcactttgactgagagtgagagcgtcggcacaggcgagcagggaagaatggtccaa
cgtgtctcccgctccgcctctgtctctgcctgcctggggtcgcccgccgtctccccctca
cctaaacttcgccctggcattagccccgccgtcatgatggtctccaagcatgttgatggt
tctctcaaccagtgggcggtaacgtttgcggagcgctctggcttctccaacgtgctgact
gtgtctcacaagtttcgctattgtggtcaccgtttccacctgaatgaccaagcatgtcac
acagtgctgcctttgctgctgaccacctctcaccacaatgccctgctcaccccgccctca
gctcccagcagcctcgaaggggagcagctgccaacctttcccctaccaaagggacttccc
aggaagcaactccgtaatgcagctacaaggaccttccatgaccccaacgccatttatagt
gaattgattttgtggagggtggaccacatcgggccgctgtcgtgcaccgggggtgtctcc
gaactggcccgtataaactctctacacacctctgcgttcagcaatgtggcctggcttccc
acactggttcccagttctgtacttggaacctactgtaacagcgccagcgcctgttttgtg
gcatcagatgggaaaaacctgcgtctctatcaagctgtagtggatgccagaaaactactg
gatgagctctctgaccctgagacgtctaaactggtgggtgaagtgtttaatatagtcagc
cagcagtccactgccagacctggttgtatcattgagctggatattatcacaaaccagtgt
ggctcaaacactcagctgctacatgtcttccaagaggattttattttgggctacaaacct
cagaaagagccagaagctttcataccagcttttccatccggagaagattaccaacctgct
ccattttccgagaaattttttctggtggtgatagagaaggatctcaacaggaactccgtc
ctgcaaatgtggcacctgcacctccagtctgtacaggcctgtgttgatgagccaagccca
gattacagcttccagagtcagctgatggttcccaaccaagcgatgaatgctgactcgtct
ccagagacctccccagtcagacctctgcctcgctccacttctactgctaacctgcaatca
gccagcaagctcatcctcagctccaagctggtgtatagcaggcggctggacctgccgcat
ggagtggaggttaccagagccaccccctcaggaggtcatctgagttcttcctcgatctat
cctgtgtgcctggctccgtacctgattgttacaacttgctccgattcccgcgtgcgcttc
tggcgctgtgcggtggagggagatgtggagagcggcggggacaaacaggacaaccgggcg
tacgcctgggagccgtgggtcctcatgaacgaggaggaggacaacaacagtgcggtgtgt
gtgtcggggcggcctgtagctgtgtcctgctcgtacatcggccgtctggcggtggctttc
aaacagcctcggtcgggacagctgcatgggtctctagaagacttctctatgcacgtgtct
atctatgagtgtgagtccacgggtggttctgagtgggttttagagcaaactctgcacctc
gatgacttcgtcaggccctcatcaactctggattcaagagtcagtgtggattcaaacctc
ttcgtctacagcaggtctgacttgtacatgagcagagaccacagctcacccaacatcaag
cacttcgtccacttggactggctgtcaaaggaggatggttcgcacatcctcaccgtagga
gtgggctccaacatcctcatgtacggccgcatctctggcgtggtcaacgagcaaacgagc
agcaaggaaggcatggcagtcattacccttcctctagggggcagtattaaacagggcatc
cgctctcgctgggtgctgcttcggtctgtggacctcctgtcgtcagtggacgggacacct
tcactaccagtttccctgtcctgggtgagggatggcatcctggtgatagggatggactgt
gagatgcacgtgtacgcccagtggcaccaggataagaagcccggtgagggagaggatggc
aatgcatcaactgcagacattgctggaggtcaagccgttggctcgtcctcagcctctgaa
ggaagagccaggtctaaaagtgtttttgagggaagtgcgggagtggatgaggcccttcgt
gccccagctggactacaggaaggagggctgtttgaagccgcccactccttgtcacccacc
ctccctcagtaccatccaacccagctgctggagctcatggacctgggcaaagttcgccgc
gccaaggccatccttgcacacctggtgaagtgtattgctggagaggttgctgtggtgagg
gatgtggaggcaggggaaggcggaggcaggaggcatctgtctcgcaccatcagtgtgact
ggcagcacagctaaagacaccattgtgagtggccgtgatggaggcagggactacacagaa
atcaactccatccctcctctgccgctctactcgctcatgttggccgatctggatacatcg
tacaaggcagaggaggcctccaaaggctccaaggtggctgatggggaagttgttcagaag
tctacagaggatcagtatgctgaccttttccaggtgccagcagtcaccacagacgacttt
gtgaactttgccactgataaaccagagaaaaagtctcgtgtgatcaacctctctcaatac
ggacccacctattttggaccagagcacgctcaggtgttgtccagtcacctcatgcattcc
agccttccaggactgaccagactggagcaaatgttcctggtggccttggcagataccgtt
gcaaccaccagcgctgaagtcacgagctccccagagcagcagtacacaggtggtgaagct
cttgatgagtgtggactcagatacctgcttgccatgcgtcttcacacatgcttgctcacc
tctctgccgccgctctaccgtatgcagctgctccaccagggtctgtcaacgtgccacttt
gcgtgggccttccactcagaagcagaggaggagctgctgaacatgattcctgccatgcag
agaggcgacccgcagtggtctgagctgagagccgtcggagtgggatggtggatccgcaac
atcaatactttgcgcaaaatggtggagaagttgggtaaagctgccttccagaggaacaac
gaccctttagatgctgctttgttctacttggccatgaagaagaaagctgtcctgtgggga
ctcttcaggtcacagcacgatgagaagatgactcagttcttcaagaacagcttcactgag
gaccgctggcggaaggcagctctgaaaaatgccttttccctgctgggaaagcagcgcttc
gagcaggcggctggctttttccttctggctgggtccctgaaagatgccatagaggtgttg
atagaaaagatggaggatctccagttagccatgatagtagccaggctgtatgaggctgac
tttgagagttcgtccacctgccaaggcctcctctatgagaaggttctgggctgcaacagg
gatgggagtggctaccactgctccaggctgcaccccgatccattcctccgcagcatcgcc
tactggatcatgaaagattacacccaagctctggatactctgctggagcgcatccccaaa
gaggacgatgagaaccccaatgtgatggtaaaagcttgcaaccctgtggtgtttagtttc
tataactacttgaggacacaccctttgatcatccgccgacattttgcaaacccagagggc
gcaacagcaactgtgggtttaaccgctgaaaagagcggcgccgatgagatcaacctcata
gagcgcaaactgttcttcaccactgccaatgcacacttcaaggtgggatgtccagtccta
gctctggaagtcctctccaagattccccgagttagcaagaaatccggctcttcggctctc
agcaaagcgtcgtccaaggtcaacgtaaacgcaagccagcctttagagaacggaacccag
ggagggatggactggagctcctcagctgcatcctctcacgcttggggaggaaatgatagc
tctggcgggatggactggagccagcctgcagtcaaagtggaggaagatgatctgaagctg
gactggggggaagataaggacgaagaagaggatgatgatgacgacggtcttaccatgaag
aaagcagagcctgagaacaaaggagacgagggccccaagctgcaaagagaagactcccag
gctgagtcagaggtggacgtgatagcagagcagctgaagttccgcgcctgtctgaagatc
ctgatgacagagctgcgcaccctggccaccggctttgaggtggacggagggaagctacgt
tttcagctctacaactggctggagaaagagatagcagctatgcataaaatctgcaactac
aaggtggaggggaaggaggagggcgccgaggtcgagcgctggagagatcgtactgcatcc
gtggacatatcagacgaagcttttgagagtacagaagcaggcgcctacgaacgccaccag
atggagcgtcggcgtcttcaagccaagcagcagcactctgagaggcgcaaggcatggctg
agaaaaaaccaggccctgctgagggtgtttctgtcctactgcagccttcacggagccaaa
ggaggaggcgtcacctctgtccgcatggagctgctgttccttctgcaggaaagccagcag
gagaccacagtgaagcagctgcagtctcctctgcctctgcccacaacactgcctctgcta
tcagcttgtatcgcccccaccaaaaccgtcatagccaatcctgttttacatctcagcaac
cacatccatgacatcctccacaccaccaccatgatgctggtccctccacatcctggcttc
atggatgatcgggttaatactgtgcacacactagcagcctccctgtctgcctgcgtctac
caagccctgtgtgacagccacagttacagcaacaatcagacagaagccaaccagttcaca
ggaatggtttaccagggtctgttgctcagtgagcgcaagcggctgcgcacagaaagcatt
gaagaacatgtaacccccaactctgctcctgcacagtggccaggcgtgtcctccctgatt
tctctgctgacgtcagcacgagaggaggaccagccgaggctgaacgtgctcctgtgcgaa
gcggtcgtggccgtttacgtctcgctgctcatccacggcctgggcacccacaacagcaat
gaactcttccgactggcagctcatcctctcaataaccgcatgtgggccgcggtttttgga
ggaggggcaaaagtcatcattaaaccaaagagaccggagctccctccagcccccactcag
gccccagcagaggatgtagatcgtcacaggcgcagattcaacatgaggatgctggttcca
ggacgccccgtaaaggaggcgccggcgacccctcctcccgtgcccgctgagagacccacc
tacagagagaagttcattcctccagagctcagcatgtgggactactttgtagctaaaccc
ttcctgccgctctcagacagcaacgctctgtatgactcagacgaaagcggcgctgaggat
gatgaagacgatgatgatgcattcctctctgacacgcagataacagagcactctgatccc
aactcctacagctgggctttgatccgtctggttatggtgaaactggctcatcacaatgtg
aagaacttcatccctctgacaggcgtggacctcacagatcttccagtctcctcccctctc
tgcaatgctgtgttgaagtctttagagaactgggagcagcttctgctagaaagaataagc
aagttcgacggcccgccccccaactacatcaacacctaccccaccgacctgagcagcgga
gccggccctgccatcctgcgacacaaagccatgctggaacccgacaacacgcccttcaag
acaaagaaccatcagtccttccccgtccgacgcctttggcatttcctggtcaaacaggaa
gttcttcaggaaacttttatacgctacatcttcaccaaaaaaaggaagcagagtgagtct
ttagagaaccatgtggaccgtataaacccaaacagcatagccggagctagcaatccctat
aaggtcgaggcggatcttggttacccaggaggaaaggctaaaataattcacaaggagtcc
gacataataatggcatttgcgatcaataaggccaactccaatgaaatagtgctggcctcc
acccatgacgtccaggaggtggacgtgtctaaccttgtggcagtccagccgtacacctgg
ataggggaggactttgataaagaatcttgcagctcggatgacatagaccatcgctcctct
cacaccaacatcgcccagacgagctccgtctcctttgcaccccccccaatgtccgtttct
gcatccatgccatggctcggcagtggtcagaccagcatgggggccagtgtgattatgaag
cggaatctgaataatgtgaagagaatgacatcccatcccatctaccagtattacatgacg
ggcgctcaggacggcagtgtgcgaatgttcgaatggaatcgacctcagcagctcatttgc
ttcagacaagccggcaacgccagggtcactcggctttatttcaactctcaaggcaataag
tgtggagtggctgatggagagggattcctcagtctgtggcaggtcaaccagacatcctcc
aaccccaaaccctacctgagctggcagtgtcacactaaggcctgctgtgactttgccttc
atcacatcctccagcctgattgccacagctggacagtccaacgataacagaaacgtgtgc
ttgtgggatactctgatttcacctaacaataccatagtccatgcgttcccctgccatgag
aacggtgccactgtgcttcagtatgctcccaaacagcagctgctgatcacaggaggcagg
aagggctttgtgtgcgtgtttgacattcgccagaggcagctgctgcacactttccaggcc
catgactcggccattaaagccctcgcgctggatgcctacgaggacttcttcgtcaccggc
tcggcagagggcaacatgaaggtctggaagttggccggtcatgggctcatgcactctttt
agcaccgaacacgccaagcagtcgatcttccgcaacatcggtgccggagtgatgcaggtg
gagacgtgtcctggaaaccgcatcttcacctgcggcgctgacggaaccctgaagatgaga
gtcctccccgacagctacaacatccccagcagcttggtcgacatcctgtaa
DBGET
integrated database retrieval system
