Oryzias melastigma (Indian medaka): 112160457
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Entry
112160457 CDS
T07439
Symbol
tars3
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112160457 (tars3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oml01007
]
112160457 (tars3)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oml03016
]
112160457 (tars3)
Enzymes [BR:
oml01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
112160457 (tars3)
Amino acid related enzymes [BR:
oml01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
112160457 (tars3)
Transfer RNA biogenesis [BR:
oml03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112160457 (tars3)
Prokaryotic type
112160457 (tars3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
112160457
NCBI-ProteinID:
XP_024150737
Ensembl:
ENSOMEG00000017135
UniProt:
A0A3B3CC88
LinkDB
All DBs
Position
LG3:complement(28669845..28686073)
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AA seq
811 aa
AA seq
DB search
MAEWLATRLAAQEEQIRLLIKEVSSLQDGLSNGLDAAGITAVTPELEILQAENEKLKYRL
LHLRRGLQAELKLEEEAEAPRKKRQGAKEATAPERNANKHQQINGVKPSNPKTNDKNKKE
KKQDKEQSEGGAKELTPWPGYISERLSLYESLKKESDALLAKRSQNSKAITVELPDGQKV
AAKSWVTTPYQVASEISQGLADNAVISRVNGELWDLDRPLERDCSLEILRFDNEDAQAVY
WHSSAHILGEAMERYYGGCLCYGPPIENGFYYDMFLDEQKAVSSSEFGDLEVLCKSVMKE
KQPFERLEISKDTLLKMFKYNKFKCRILNEKVTTPTTTVYRCGPLIDLCRGPHVRHTGKI
KAMKIYKNSSTYWEGCSDMETLQRIYGISFPDSKMLKEWERFQEEAKNRDHRKIGKDQEL
FFFHDLSPGSCFFLPRGAYIYNTLTEFIRDEYWRRGFQEVASPNIYNSKLWETSGHWQHY
SENMFSFPVEEDVFALKPMNCPGHCLMFSHRPRSWRELPLRLADFGVLHRNELSGTLTGL
TRVRRFQQDDAHIFCTMDQIESEMKGCLDFLRGVYDVFGFSFQLHLSTRPEKYLGDIDVW
NQAEKQLENSLNEFGEPWKLNPGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFN
LTFVGKDGDDKARPVIIHRAILGSVERMIAILTENYAGKWPLWLSPRQVMLVPVNPSCED
YGKKVCKQFTEAGFMADADLDSSCLLNKKIRNAQLAQYNFILVVGEKEKMTNSVNVRTRD
NKVHGELSVSEVMARLSLLKQSRCRNAEEEF
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatggctagcaacacgtttggccgcacaggaggagcaaattcgactccttatc
aaggaggtgtctagtctccaggacggactcagcaacgggctcgacgccgccggcatcacg
gccgtaacaccggagctggagatcctgcaggcggagaatgagaagctcaagtaccggctg
ctgcacctccggcgaggtctgcaggcggagctgaagctggaggaggaggcggaggcgccg
cgtaagaaacggcaaggggctaaggaggccacagcccccgagaggaacgccaacaaacac
cagcagataaacggggtgaaaccctcaaacccaaaaacaaatgacaaaaacaagaaggag
aagaaacaagataaggagcaatctgaaggaggcgcaaaggagctgaccccctggcctgga
tacatctctgagcgcctttccctctacgagagtctaaagaaggaaagtgacgctctgctg
gccaaaagatcccagaacagcaaagccatcacagtggagctgccagacgggcaaaaggtg
gcggctaaatcctgggtcaccacaccttatcaggtggccagtgagatcagccagggcctg
gctgacaatgcagtgatttctcgggtgaatggagagctttgggatctggacagacctctc
gagcgggactgctctcttgagattttacgctttgacaatgaagacgctcaagctgtgtac
tggcactccagcgctcacattctgggtgaagcaatggagcgctattatgggggctgtttg
tgttatggcccccccatagagaacggcttctactatgacatgttcctggacgaacagaaa
gccgtctccagctctgagtttggcgacttggaggtgttgtgtaagtctgtgatgaaagag
aagcagccattcgaaaggcttgagatcagcaaagacactctgctcaaaatgtttaaatac
aacaaattcaagtgccgcattctgaatgagaaagtcaccactcccactacaacagtctac
cgatgtgggcccctcattgatttatgcagaggcccccatgtcagacatacaggcaaaatc
aaggcgatgaagatttacaagaactcctccacttactgggaaggttgctccgacatggaa
actctccaaaggatctatgggatttccttcccagactcgaaaatgcttaaggagtgggag
cgctttcaggaggaggccaagaacagagaccatcgcaagattgggaaagatcaggagctc
ttcttcttccacgatctcagtcccggcagctgcttcttcctgccgcgtggagcctacatc
tacaacacgctcacggagttcatccgagacgagtactggagaagaggctttcaggaagta
gcctcccccaacatttacaacagcaagctgtgggagacatctggccactggcagcactac
agtgaaaacatgttctcgttcccggtggaggaggatgtcttcgctctgaagccgatgaac
tgccccggtcactgcctgatgttcagccacaggcctcgctcttggcgggagctgcctttg
agattggcggattttggggtcctgcacaggaacgagctgtcgggaactttgaccgggctg
accagagtgcggcgctttcagcaggacgacgcccacattttctgcaccatggatcagatt
gaatcagagatgaaaggctgcctggacttcctgcgtggcgtttacgacgtgttcggattc
tccttccagcttcacctctccactcgtccagagaagtacctgggtgatatagacgtgtgg
aaccaggctgagaagcaactggaaaacagcctgaatgagttcggggaaccatggaaactc
aaccccggagatggcgctttttatggacccaagatcgacattaagatcaaagacgcaatt
ggacgttaccaccagtgcgcaacaattcagctagacttccagctgcctattcgcttcaac
ctgacctttgtgggaaaagatggtgatgacaaagctcgaccagtcatcatccatcgggcc
atcctgggctcagtggagaggatgattgccattctcaccgagaactatgccgggaaatgg
cctctgtggctctctccacgccaggtgatgctagtgcccgtcaacccctcctgcgaggac
tatggaaagaaggtgtgtaagcagttcacagaagctggttttatggcagacgctgacctg
gactctagttgtcttctgaacaagaaaatccgaaatgcccagttggcacaatataacttc
attcttgtggttggagagaaggagaagatgactaacagcgtcaatgtgcgcaccagagac
aacaaggttcacggggagctgtcggtgtccgaggtgatggctcgcctgtctctgctcaaa
cagtcccgctgcagaaacgcagaagaggagttctga
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