Oryzias melastigma (Indian medaka): 112160479
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Entry
112160479 CDS
T07439
Symbol
ap1g1
Name
(RefSeq) AP-1 complex subunit gamma-1 isoform X1
KO
K12391
AP-1 complex subunit gamma-1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112160479 (ap1g1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112160479 (ap1g1)
Membrane trafficking [BR:
oml04131
]
Endosome - Golgi transport
Others
AP-1 complex
112160479 (ap1g1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
INTS1_R4
DUF5609
Motif
Other DBs
NCBI-GeneID:
112160479
NCBI-ProteinID:
XP_024150802
Ensembl:
ENSOMEG00000001903
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All DBs
Position
LG3:complement(18471301..18493359)
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AA seq
821 aa
AA seq
DB search
MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLG
YPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQG
LALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATK
NLLSEKNHGVLHTSVVLLTEMCERSPDMLAHFRKNEKLVPQLVRILKNLIMSGYSPEHDV
SGISDPFLQVRILRLLRILGKGDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIM
DIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDL
DVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCDPEFKADCASGVFLAAEKYAPSKRW
HIDTIMRVLTTAGSYVRDDSVPNLIQLITNSVEMHAYTVQRLYKALLDDISQQPLVQVAS
WCIGEYGDLLLSGQCEEEEPIQVTEDEVLDVLEGLLVSNLSTPVTRGYSLTAIMKLSTRF
SSVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPIMEKTASNGPTEI
VQTNGETEPSVVEPKHPPPVNQPASQGNDLLDLLGGNDVPVIQTTMPTKPASAGGELLDL
LGDLSLGGPAPAPAPPAPASQPPFLLDGLSSQPLFNDIAAAGIPPMTAYNKNGLKIDFTF
ERANPNPNVAVITIHASNSTEADMTDFVFQAAVPKTFQLQLLSPSSNVVPALNQGTVTQV
IRVLNQQKQQLRMRIKLTYTHKGSAVQDLAEVNNFPPQSWQ
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgccagctccgatcagactgcgggagctgatccgaaccatccggacagcacggacccag
gcagaggagcgagagatgatccagaaggagtgtgctgctattcgctcttcatttagagag
gaagacaatacgtatcgttgcagaaatgtggcaaagctgctgtatatgcacatgttgggc
tacccagcacactttggacagctggagtgtctgaagttaattgcgtcccagaagttcaca
gacaaacgaataggctatttgggagctatgctgctgttagatgaaagacaagatgttcat
ttactaatgacaaactgcattaagaatgatttaaatcacagcacacaatatgttcagggc
ctggctttgtgcactttagggtgtatgggatcatcggaaatgtgtcgtgatctggcaggg
gaagtagagaagctcctcaaaacatcaaactcctacttgaggaaaaaagcagcattgtgt
gcagttcatgtgatcaggaaggttccagaacttatggaaatgttccttccagcaacaaaa
aacctgctgagtgagaagaaccacggtgttctccatacatcagtcgttctcctcactgag
atgtgtgaaagaagtcctgacatgctggcccacttcagaaagaatgagaagctggttcca
cagttggtgagaatcctgaagaacttaataatgtctggatactctccagagcatgacgtg
tcaggcatcagcgaccccttcctgcaggttcggatattgagattactgcgaattttaggc
aaaggtgacgacgactcaagtgaagcaatgaatgacattcttgcacaggtggcaacaaac
acagagacaagtaaaaatgtaggtaatgcaatcctctatgagactgttctgactataatg
gatatcaagtcagaaagtgggctgagggttttggccattaacattctaggacgcttcctt
cttaacaatgacaagaacattagatatgttgcgttaacatctctactaaagacagtacaa
acggaccacaatgcagtgcagaggcatcggagcaccattgtggattgtttgaaagacctg
gacgtgtccatcaagagacgtgcaatggaactgagctttgcccttgtgaatggaaacaat
atcagaggcatgatgaaagagctgctctatttcctggactcctgtgaccctgaattcaaa
gcggactgtgcatcaggagttttcctcgctgctgagaaatatgctccttcaaagagatgg
cacatagacaccatcatgagagtgctgacaacagccggaagctatgtccgcgacgactcc
gtgcccaacctcatccagcttatcaccaacagtgttgaaatgcatgcttacactgtgcag
agactgtacaaagcccttctggatgacatctcacagcaaccccttgtgcaggtggcatcg
tggtgcataggagagtatggagacctgctcctttcagggcagtgtgaggaagaggagccc
attcaggtgactgaggatgaagttcttgatgtgttggaaggtctgctcgtttccaacttg
tccacacctgtgacccgaggttattccctcacggctataatgaagctctccactcgcttc
agcagtgtaaaccgaatcaagaaagtagtctcgatatacggcagtagtatcgatgttgag
cttcagcagagagctgtggagtacaatgcacttttcaagaaatacgaccacatgaggccg
gctcttcttgagcggatgcccatcatggagaagactgcttccaacggccccacggaaatt
gtacagacaaatggggagacggagccttcagttgtggaaccaaaacatccaccgcctgtc
aaccaaccagccagtcagggtaatgatttgttagacttgctgggtggtaacgatgtgcca
gtaatccaaaccaccatgcccaccaagcctgcctcagctggaggagaacttcttgatctt
ctgggtgatctatcattaggtggtccagctccagctcctgctcccccagctcccgcttct
caaccccctttcctcttggatgggctctcttcacaacctctattcaatgacattgcagct
gcaggtatccctccgatgacagcatacaacaaaaatggcctgaaaatagattttacgttt
gaaagagcaaatcccaacccaaatgttgcagtcattaccatccatgcatccaactcgacc
gaggcagatatgactgactttgtttttcaggctgcagtaccaaagacattccagctgcag
ctcctctcacccagtagtaatgttgtcccagcactcaaccagggaacggtcacacaggtc
atcagagttctcaaccaacagaagcaacagctacgaatgaggatcaagctgacgtacacc
cacaaaggctcggctgtgcaagacctggctgaggttaacaacttccctccccagtcctgg
caatga
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