Oryzias melastigma (Indian medaka): 112160529
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Entry
112160529 CDS
T07439
Symbol
sema6dl
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like isoform X1
KO
K06842
semaphorin 6
Organism
oml
Oryzias melastigma (Indian medaka)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
112160529
NCBI-ProteinID:
XP_024150900
Ensembl:
ENSOMEG00000000246
UniProt:
A0A3B3DCS0
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Position
LG3:complement(10615508..10635998)
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AA seq
1109 aa
AA seq
DB search
MGQRAALLLSELLLLLLTASRTLLAVSFPEDVAPLDVVDAHFSRRYPVFRGRPSANESQH
RLDFQLMTKIQDTLFIAGRDQVYLVSLRESYRNEIIPYRKLTWRSGQDDRDMCAVKGKHR
DECHNFIKVLVPRNDDLVFICGTNGFNPMCRYYRLDNLEFDGEEINGLARCPFDSKQTNV
ALFAEGKLYSATVADFQASDSVIYRSMGDGSALRTIKYDSKWLKEPHFLHAAEYGNYVYF
FYREIAVEHSNLGKVVYSRVARICKNDVGGSQRVLEKHWTSFVKARLNCSVPGESFFYFD
VLQSITDIIDINGVPSVVGVFTTQMNSIPGSAVCAFSMADIEKVFWGRFKEQKTPDSVWT
PFPEEKLPKPRPGSCAGHGPAASFKNSIEFPDETLQFIKSHPLMDTAVPSTGDEPWFTKT
RVRYRLTALAVDNEAGPHKNYTVVFIGAESGVILKVLAKTSPMLLNDSLLLEEIDVFNKA
KCLSNHEDDKRVLSLHVDKDAHSLYVAFSSCVIRIPLSRCERHSSCHKSCIASRDPYCGW
RSHGACEKIQPGVLTGYEQDVELGNTAHLGDCHAFLGSTSVPDFKPFGDPTSDMELSSAP
VTPQPSGPIHPPVLISTHSPGAEPGPELYGSGFAQEDDPTTSNSLKSFPGVPEGVAATNQ
WSDTNQMVHMNILITCVFAAFLMGALLAGLIVFCYRDSFLRKPRRVHKDAESEAPSCSDS
AGSFVKLNGLFDSPVKEYQTNMDSPKLYTNLLSNGKDLNTSNGDTKTMILRDGCQPPELA
ALPTPESTPVLQQKGLQPIKNQWERAHGKVSGSHKESNSSAKSPQFLLSSPSPANPHHSH
LGLGHSHIPSAVVLPNATHDHQNTDNEDEPLPHSSEKKLKNIDSKGGRRDQKRSVDARNT
LNDLLKHLNDSVANPKAIFQEGSGPHPRPQLTLEPMEELTEMPPKVPSREASLYSPSSSL
PRHSPTKRVDVPMPTTPTTPTGSLSMGGTLERQRGGYQLHRSASHRHSLSTSPNVTMGVS
VSRQHSMNRGGYMPPTPPSRLDSHGAVVASGMHSPHPSSLSRQSSYSGHDSLPRTGVKRT
PSIKPDVPPKPNGFSPQTPQMRVVNKYSY
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgggccagagagctgcgctactgctcagtgagcttctgctactgttgctgacagcatcg
cgcactctcctcgcagtcagcttcccagaggacgtggcgcccctcgatgtcgttgacgca
catttttcccggaggtaccccgtgttcagaggcaggccctctgcgaacgagtcccagcat
cgccttgactttcagctgatgaccaagatacaggacactctgttcattgctggcagagat
caggtgtacctagtcagtctgagagaatcctacagaaatgagatcattccttaccggaag
ttaacatggcggtcgggccaagatgacagagatatgtgcgctgtgaaaggaaaacacaga
gacgagtgccacaacttcatcaaagtgttggttcccagaaatgacgacctggtctttatc
tgtggcacgaacggctttaaccccatgtgcagatactacaggctggataacctcgagttt
gacggcgaagagatcaatggtctggcacggtgcccatttgactccaagcaaaccaacgtt
gctctctttgctgaaggaaagttgtattctgccactgtggccgacttccaagccagcgat
tctgtaatctatcgcagtatgggtgatggatcagcactgaggaccatcaaatacgactcc
aaatggttaaaagaacctcatttcctgcatgcagccgagtatgggaactatgtgtatttc
ttctaccgagagattgcagtggagcacagcaatttggggaaggttgtgtattccagagtg
gctcggatctgtaaaaatgacgtgggagggtcacagcgggtgctggagaagcactggacg
tccttcgtgaaggcgaggctgaactgttcagtgccaggggagtccttcttctactttgac
gtcctccagtccatcactgacatcatcgacattaacggggttccctcggtggtcggggtt
ttcaccacacagatgaacagcatcccaggctcagctgtgtgtgccttctccatggcggac
atagagaaagtgttctggggccgcttcaaagaacagaagaccccagattctgtgtggact
ccgtttcctgaagaaaaactacccaaacccagaccggggagctgtgcaggtcatggtcca
gctgcgtcctttaaaaactccatcgagttcccggatgaaaccctgcagttcatcaagtcc
caccccctcatggacacagcagtgccttctactggggatgaaccttggttcaccaagaca
cgtgtccggtacagactaacggcactggctgtggacaatgaagctggacctcacaagaac
tacactgtggtgtttatcggcgctgagtcaggggtcatcctcaaggttttggctaagact
tcccccatgctcttgaatgacagcctgctcctggaggagatagatgtcttcaataaggcc
aagtgtctttctaaccatgaggacgacaagcgtgtcctctcgctgcacgtggacaaagac
gcgcacagcctttatgtcgccttttccagttgtgtaatccgcattccgctgagtcgctgc
gaaagacattcttcctgccacaagtcttgcattgcatcaagggatccttactgtggctgg
aggtctcacggtgcttgtgagaagatacagccgggtgttctaactggatatgagcaagac
gttgaattaggaaacacagcccatcttggagactgccatgcttttttgggcagtacttca
gtgccagatttcaaaccatttggcgaccctacctctgacatggagttgtcatcagcgcca
gtcactccccagcccagtgggcccatacaccccccagtactcatatccactcacagccca
ggtgctgagcctggtccagagctctacggctcaggctttgcacaggaggatgacccaacc
acctccaattctttaaaatctttcccaggggtgccagagggcgtggcggcgactaaccaa
tggagcgataccaaccagatggttcacatgaacatcctcatcacctgcgtctttgccgct
tttcttatgggagctctcctggcgggtttgattgtgttctgctaccgggactcatttcta
cgcaaaccaagacgcgtgcacaaggacgccgagtccgaggcaccatcttgctctgattct
gctgggagttttgtcaagctcaatggcctttttgacagccctgtaaaggagtaccaaaca
aacatggattctcctaaactgtacaccaacctgttgagtaatggcaaagacttgaataca
tccaatggtgacaccaagactatgatcctacgggatggatgtcagccaccagaacttgct
gctctacccacaccagagtccacacctgtgctccagcagaaaggcctacagcctatcaag
aaccagtgggagagggcccatgggaaggtcagcgggtcccacaaggagtcaaattcatcg
gccaagagtccacagttccttctctcttctccctcccctgccaacccccaccactctcac
cttggcttgggacattcccatattcccagtgcagttgtcttgcccaatgccacccatgac
catcagaacactgacaatgaggatgaacctctgcctcattcttctgaaaagaagttgaaa
aatatagactctaaagggggcagaagagaccagaagaggtctgtggatgccagaaacact
ttaaatgaccttttaaaacacctcaatgactctgtggccaatcccaaggccattttccag
gaggggtcagggccccatccaaggccacaactcacactggagcccatggaggaactgact
gaaatgcctcccaaggtgcccagtcgtgaggcttccttgtactctccctcctcctccttg
ccaaggcacagccctacaaagagggtcgatgtgcccatgcccacgactcccaccacacca
acgggaagtctgagcatggggggcacattggagagacaaagaggtggttatcaactccat
aggagtgcctctcacaggcattccttatccacctcaccaaatgtgaccatgggggtgtct
gtatctcgccaacacagtatgaacagaggaggttacatgcccccgacgcccccatcaaga
cttgattctcatggtgcagtagtagcatcgggaatgcactcaccccacccttcttctttg
tcacggcagagcagctacagtggtcatgactccctcccccgcacaggggttaaacggacc
ccttcaataaagccagacgtacccccaaaaccaaatggattttctccacagactccacaa
atgcgagtggtcaacaagtacagctattaa
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integrated database retrieval system
