Oryzias melastigma (Indian medaka): 112160544
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Entry
112160544 CDS
T07439
Symbol
myo5aa
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112160544 (myo5aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112160544 (myo5aa)
04131 Membrane trafficking [BR:
oml04131
]
112160544 (myo5aa)
03029 Mitochondrial biogenesis [BR:
oml03029
]
112160544 (myo5aa)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112160544 (myo5aa)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
112160544 (myo5aa)
mRNA cycle factors
P-body specific factors
112160544 (myo5aa)
Membrane trafficking [BR:
oml04131
]
Others
Actin-binding proteins
Myosins
112160544 (myo5aa)
Mitochondrial biogenesis [BR:
oml03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
112160544 (myo5aa)
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
112160544 (myo5aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
DUF5382
AAA_16
HTH_17
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
112160544
NCBI-ProteinID:
XP_024150925
Ensembl:
ENSOMEG00000014377
LinkDB
All DBs
Position
LG3:complement(24189846..24244205)
Genome browser
AA seq
1874 aa
AA seq
DB search
MAASELYTKSARVWIPDAEEVWKSAELTKDYKNGEASLQLMLEDGKIIEHKLDPKTKNLP
YLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYENLPIYG
TDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFDNRYRIIGANMR
TYLLEKSRVVFQADEERNYHVFYQLCASAHLPEFKNLRLSSANDFLYTRQGRSPVIEGVD
DTKELCTTRHAFTLLGINESYQMGLFQVLAAILHLGNVEIKDRDADSSLIAPNNRHLTAF
CELVGVTYQDMSQWLCHRKLKTANETYVKPLPRLQATNARDALSKHIYAKLFNWIVEHVN
KALVTNVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIEAKMGILDLLDEECKMPKGSDDSWAQKLYNTHLKTCSLFEK
PRMSNRAFIIQHFADKVEYQCDGFLEKNKDTVNAEQINVLKASKFDLLVELFRDEEKATS
PTGQTPGTGGRTRLSIKPDKGRDTSSKEHKKTVGCQFRNSLQMLMETLNATTPHYVRCIK
PNDFKLAFSFDPKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLAD
KKMTCRNVLEKLVQDKDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRCWLA
RKKYLRKRSAAITIQRFTRGYQARCLAKFMRRTQAATIIQKYQRMCVERKRYRQKQAAAL
AMQTILRAYMARQKYQALLREHKAVIIQKFIRGWLARCWYKRCLEAIVYLQCCIRRMRAK
RELKKLKIEARSVEHFKKLNKGMENKIMQLQRKIDEQHKDNRLINEKLVSLESSYSTESE
RMRSELNRLRGAEEDARNKTNQVSSLLEELERLKKELSTTQQEKKTIEDWAQTYRVEMEK
MVSELKDQNGTLKKEKDDLNRMIQEQSQQMTEKMARAIVLETQQLETDLNEERSRYQNLL
TEHLRLEEKYDDLKEEMALSSNVSKPGHRRTDSTHSSNESEYTYNSEYTDLEEGSRARED
VTRGMDTSLTLKLQKRVTELEQEKQSLRNELENKEDQFQRARARDDAEFKKARGAELEYE
SLKRQELESENKKLKHDLAEMRKSLLGDAATGAGAPGSPAYKVLLDQLNASCEELEVRKE
EVLILRSQLVSQKEAMHHKDEKETMTEPSVFTEDVSKLKDAGEIKQAYISLKDTNKSAAP
DLHKLNEDGELWLVNQGLKETIRLLEHQLQSQRRTYDNEVESLRGELQNVKEENNRQQQL
LAQNLQLPPEARIEASLQHEITRLTNENLELMADDPTASQEARVIILRRMVDLMEQLEKQ
DRTIRKLKKQLKVYSKRIGEMGAVQMEGQTSPGQMVDEPIHPVNIPRREKDFQGMLEYKK
EDEMKLVKNLILELKPRGVAVNLIPGLPAYILFMCLRHADYLNDDQKVRTLLTSTINSIK
KILKKRGDDFETVSFWLSNTCRFLHCLKQYSGDEAFAKHNSSRQNEHCLTNFDLAEYRQV
ISDLAIQIYQQLVKCMENILQPMIVSGMLEHETIQGVSGVKPTGLRKRTSSIADEGTYTL
ESILRQLSAFHSTMCQHGTDPELIKQVVKQEFYIIGAVTLNNLLLRKDMCSWSKGMQIRY
NVSQLEEWLRDKGLMNCGAKETLEPLIQAAQLLQVKKKTDEDADAICSMCHALTTSQIVK
ILNLYTPVNEFEERVSVAFIRTIQTRLRDRCESPQLLMDTKMIYPVTFPFNPSSLALETI
QIPTSLNLGFLTRV
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtcggagctgtacacaaagtccgctcgggtgtggatccccgacgcagaggag
gtgtggaagtctgctgaactaaccaaggactacaaaaatggcgaggcctctctacagctc
atgttggaggatggaaagatcatcgagcacaaactggacccgaagacgaagaacctgcct
tacctgcggaacccagacatcctggtgggagagaatgacctcacagctctcagctacctc
catgagccggccgtgctccacaacctcaaagttcgcttcatcgactccaaacttatttac
acctactgtgggattgttcttgtggccatcaacccttatgagaatctgccaatttatgga
accgacattatcaacgcctacagtggtcagaatatgggagacatggatccacatatcttt
gccgtggcagaagaggcatacaaacagatggccagagacgaacggaaccagtccatcatt
gtgagtggggagtctggagcgggaaagacggtatcagcaaaatatgccatgagatacttt
gctacagttagtggttctgccagtgaagcaaacgtggaggagaaggttttggcttccaac
cccatcatggaggctatcggtaatgcaaagacaacaaggaacgacaacagcagccgcttt
gggaaatacattgagatcggctttgacaatcgttatcgcatcattggtgccaacatgagg
acatatcttctggaaaaatcccgagtggtgtttcaggctgacgaggagaggaattatcat
gtcttttatcagctctgtgcttccgcacatttacccgagttcaagaacctcagactcagt
agtgcaaatgacttcctgtacacccgacagggtcgcagccccgttattgaaggtgtggat
gacaccaaggagctttgcaccactcgtcatgccttcacactgctcggcattaatgagtcg
tatcagatgggcttgttccaagttttggctgctattctccatctagggaatgtggagata
aaagacagagatgcagacagcagtcttattgctcccaacaatcggcacctgacggctttt
tgcgagctggttggcgtaacctaccaggacatgtcccagtggctgtgccacaggaagctg
aaaacggccaacgagacttacgtcaagcctcttcctcgccttcaagccaccaacgctcgc
gatgccctctccaaacacatctacgccaagctcttcaactggattgtagagcatgtcaat
aaggctttggtcactaatgtgaagcagcactctttcattggagtcctcgacatctacggg
tttgaaacatttgaaattaacagttttgagcagttctgtatcaactacgccaatgaaaaa
ctccagcagcagttcaacatgcatgtgttcaagctggagcaggaggagtacatgaaggag
caaatcccctggactctgatcgacttctacgacaatcagccctgcatcaacctcattgaa
gcaaagatgggcatcctggacctgctggacgaggaatgcaagatgcctaagggttctgat
gattcatgggcgcagaagctgtacaacacccacctgaagacatgttctctcttcgagaag
ccacgcatgtccaaccgcgccttcatcatccaacatttcgctgataaggtggaataccag
tgtgatggcttcctggagaaaaacaaggacactgtcaatgcagaacagatcaatgtgctg
aaggctagcaagtttgaccttttggtggagctcttccgagacgaggagaaggcaaccagc
cccacgggtcagacccccggcaccggaggccgcacccgcctcagcatcaaaccagacaag
ggtcgggacaccagcagcaaggagcacaagaagactgtcggctgtcagtttcgtaattct
ctgcaaatgctgatggagactttgaacgcgaccactccgcactacgtccgctgcatcaaa
cccaacgactttaagctggccttctcctttgaccccaagcgtgcggtgcagcagctcaga
gcgtgcggtgtcctggaaactattcgcatttctgctgcaggattcccgtccagatggacg
taccaggagttcttcagccgctacagagtactgatgaaacaaaaggacgttctcgcagac
aagaagatgacctgccggaacgttctggaaaaactagtgcaggacaaggacaagtaccag
tttggaaagaccaaaatcttcttcagggctggccaggtggcttacctggagaagctgagg
gcagacaagctgcgcgccgcatgtatccgcatccagaaaaccatccgctgctggctggcc
cgcaagaagtatctgcgcaagcgcagtgccgcaatcaccattcagaggttcacccgagga
taccaggcccgctgtttggctaagttcatgcgtcgcactcaggcagctaccatcatccag
aagtaccagaggatgtgtgtggagaggaaacgctacaggcagaagcaggctgctgccctg
gccatgcagaccatactcagggcttacatggcccggcagaagtaccaggcgcttttgcga
gaacacaaggcagttataatccagaagttcattcggggctggttggcccggtgctggtac
aagcgctgcctggaggccatcgtctacctgcagtgctgcattcgtaggatgagagccaag
cgggagctgaagaagctgaagattgaggctcgatcagtcgaacacttcaagaagctcaac
aaaggcatggagaacaagatcatgcaactgcagaggaagattgacgagcagcataaagac
aatcggttgattaatgagaagctggtgagcttggagagctcctactcaactgaaagtgag
cggatgcgcagtgagctgaaccggctgcgaggcgcagaggaagacgccaggaacaaaacc
aaccaggtgtcatccctgctggaggagctggagaggctgaagaaggagctgagcaccaca
cagcaggagaagaagaccatcgaggactgggcgcagacctacagggtcgaaatggagaag
atggtttcggagctgaaggatcagaacggaacgctgaagaaggagaaggacgacttgaac
aggatgattcaggaacagagtcagcagatgacggagaaaatggctcgtgcgattgtcctg
gagactcagcagctggaaacggatctgaacgaggagcgctctcgttaccagaacctgctc
acagaacaccttcgcctcgaggagaagtacgacgacctgaaagaggagatggctctgtct
tcgaacgtgtccaagcctggtcacaggagaaccgactccacccacagcagcaacgagtcc
gagtacacgtacaactcagaatacaccgatttagaagaaggctcccgtgcccgcgaagat
gtcacccgaggaatggacacgtctttgaccctcaagcttcagaaacgcgttacagagctg
gagcaagaaaagcagtcgctgcgcaatgagctggaaaacaaagaagatcagttccagcgg
gccagagccagggatgatgccgagtttaaaaaggcccgtggagctgaactggagtacgag
tctctgaagcgtcaggagctggagtctgaaaacaagaagctgaagcatgacttggcagag
atgaggaaaagcctgctgggtgatgcagccacaggtgccggggcgccgggttctccggct
tacaaggtgctcctggaccagctgaacgcctcctgtgaggaactggaggtccgcaaagag
gaggtgctgatcctgagatcccagctggtcagccagaaagaagccatgcaccacaaggat
gagaaggagaccatgacggagccgtctgtgtttaccgaagacgtctccaaactgaaagac
gcgggtgaaataaagcaagcttacatcagcctcaaagacaccaacaaatctgctgctcca
gacttgcataagctgaatgaggacggggagctgtggctggttaatcagggcttaaaggag
accatcaggttgctggagcaccagctgcagagtcagcggagaacgtacgacaacgaggtg
gagtcgctgcgcggcgaactgcagaacgtcaaggaggaaaacaaccggcagcagcagctg
ctggctcagaacctccagctgcctccagaggcccgaatcgaagccagtttgcagcatgag
atcacccggctcaccaacgagaacctggagctcatggcagacgaccccacagcatcccaa
gaggctcgagtcatcattttacggcggatggttgaccttatggagcagctggagaagcag
gacagaaccatccgcaagctcaagaagcagctgaaggtttactccaagaggattggagaa
atgggagcggtacagatggaggggcagacatctccaggccagatggtagacgagcccatc
caccctgtcaacatcccccgcagggagaaagacttccaaggaatgcttgagtacaagaaa
gaggatgagatgaagctggtcaagaatctgatcctggagctgaagcctcgcggtgtagcc
gtgaacctgatcccaggtctgccggcttacattctgttcatgtgtctgcgacacgcagac
tatctgaacgatgaccagaaggtccgcacgctgctcacgtcaacaatcaacagcattaag
aagatcttgaagaaacgaggagatgactttgagaccgtgtctttctggctgtccaacacc
tgccgcttcctgcactgtctgaaacaatacagcggagatgaggcctttgcgaagcacaac
tcatccaggcagaacgaacactgtctgaccaactttgacctggcagagtacagacaggtc
atcagtgacctggccatccagatctaccagcagctggtcaagtgcatggaaaacatcctg
cagcccatgatagtgtctggcatgttggagcacgaaaccatccagggggtgtcgggcgtg
aagcccacaggtctccgaaagcgcacgtccagcatcgctgacgagggcacgtacacgctg
gagtccatcctgaggcagctgagcgccttccactccaccatgtgccagcacggcaccgac
cccgagctcatcaagcaggtggtgaagcaggagttctacatcatcggagccgtcaccctc
aacaacctgctactgcgcaaagacatgtgctcctggagcaaaggcatgcagatcaggtac
aatgtgagccagctggaggagtggctcagagacaaaggtctgatgaactgtggagccaaa
gagacgctggagcctctgatccaggccgctcagctgctgcaggtgaagaagaagacggac
gaggatgctgacgccatctgctccatgtgccacgccctcaccacctctcagatcgtgaag
atcctgaacctctacactccagtaaatgagtttgaggagagagtatctgttgctttcatt
cgaaccatacagactcgcttgcgagaccgctgtgagagcccccagctcctcatggatact
aaaatgatctacccggtcaccttccccttcaacccctcctccctggctctggagaccatc
cagatccccacctccctcaacctgggcttcctcacccgagtctaa
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integrated database retrieval system
