Oryzias melastigma (Indian medaka): 112160566
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Entry
112160566 CDS
T07439
Symbol
fhod1
Name
(RefSeq) FH1/FH2 domain-containing protein 1
KO
K23938
FH1/FH2 domain-containing protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112160566 (fhod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112160566 (fhod1)
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
112160566 (fhod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
FH3_FHOD1-3
Formin_GBD_N
Motif
Other DBs
NCBI-GeneID:
112160566
NCBI-ProteinID:
XP_036073362
Ensembl:
ENSOMEG00000022632
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All DBs
Position
LG3:complement(34972889..35008218)
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AA seq
1337 aa
AA seq
DB search
MASVTCRVQFLEDSDPFVCTNFPEPRRPPTVDLEENLPLSEQIPAIHKLLDAPHKLEDCT
LQVSPSGHYLDLDSSLAEQRDELESFYDDVTKGKKPVLILRTQLSVRVHSILEKLYNSHG
PDLRRALFSLKQLFQDDKDLVPEFVASEGLTCFIKVGAEADHNYQNYILRALSQIVLFVD
GMNGVISHNETVQWLYTLTGSLSRLVVKTALKLLIVFVEYSESNSPLLIQAIHVVDRKRE
AKPWSFIMDILHERNGADAELLMLTMTLINKALAVLPDQDSFYDVTDCLEQLGMETIIQK
HLNRLGTEPDLRAQFTTYETALRHEDGDVEDTSSLLRKEKRKAGEQEGRRSRRSSQNAPD
LLSPISPFTPLSPSLSNTPSSVTVSSPSYMSGPDSRTSSPLTSDPGSSSSSPSGSRTSSP
LPPQPNGSVPPDQGKKSSSRSFLSHHMSVLGLKRKSRLFSKSSSVSEEPSTNLSSTPPDL
SLQEKTPSQLNSEQTRTEAKSSSNSDPDDIFCPDDCNIILDKPILKKYQGTFLRDLASKQ
REKKKSLHHSRTKQLASNEATPSIVESGAESSDVRVSEEPHDQTSDQDTHGESESHNDPG
MQRQCSTLSDEKKFVLDMLYSKNSAEVPLSQAASEPPSTEEKSSVSEEHVCGQVSSRLSD
LEARSVEAASPNEGSASIKEELESLGGSAQAARARLEEEKKRYLQRQQSSIDVEAHAKRL
EKTRMTPLEAKAPVDAWDQLQPSGADLRIKDLDFSDLLDEEDIDVLDMDTFDSSHPSIPG
VPPPPPLLGAARPLSSAPLQKKKTVKLFWRELKQADRPQKCRFGRGTVWASLDKVEVDTA
RLEQLFESKTKELSVTKKGPETKKAEILVLDPKRSNAINIGMTVLPALHVIKSAILSFDE
FAISKEGIEKILTMVPTEEEKQRIQEAQLANPDVPLGSAEQFLLSLASISALTPRLQLWA
FKLNYEALEKEIAEPLFDLKLGMEQLASNQTFRRILATLLAIGNFLNSTSVKGFELGYLE
KVTEVKDTVHRQSLLYHTCKLVVDKYPESTDVYSEIPAITRSAKVDFELLSENLVQLERR
CKASWDNLKVVAKHETKAALKTKMTEFLKDCTQRIIILKVVHRRVINRFHSFLLFLGQPS
SSVRDIKVTSFCRIISEFALEYRTSRDRVLTLKRKRTTLRERRKTRGKMITEMEKFSAAM
PDLDTPSLVSMASEAEPEQQEEHENMKNLLISSSSSLSADTRGLRRSRAVRSFGRSSPTP
MSGARDDGISCQDDATDEIMNRLVKTVSQNPSQRTSNPRTRKRSNLNRKSIRRTLKSGLG
VDMAQIQENSSRPGETV
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgtcacgtgccgggtccagttcctggaggactcggacccgttcgtctgcacg
aacttccccgaaccgcgcagacctccgaccgtggacctggaggagaacctgcctctgagc
gagcagatcccggccattcacaagctgctggacgcgccgcacaagctggaggactgcacc
ctccaggtgagcccgagcggacactacctggacctggactcgtctctggccgagcagcga
gacgagctggagagcttctacgacgacgtgacgaagggaaagaagccggttctgatcctg
aggacccagctctccgtgcgcgtccactccatcctggagaaactctacaactcccacggt
cccgatctgcggagggctctgttctccctcaagcagctcttccaggatgacaaagacctg
gtcccggagttcgttgcgtctgaaggtctgacttgcttcatcaaagtcggagcagaagcc
gaccacaactaccagaactacatcctgagagccctcagccagatcgtgctgtttgtggac
ggcatgaatggagtcatcagccacaacgagacggtgcagtggctctacacgctgacagga
agtctgtctcgtctggtggtgaagacggctctgaagctgctcatcgtgtttgtggagtat
tcagagtccaacagtcctctgctcatccaggccatccatgtggtcgacagaaagagagaa
gcaaagccttggagtttcatcatggatatcctccacgagagaaatggagctgacgccgag
ctgctcatgctaaccatgaccctcatcaacaaggctctggccgtactcccagaccaggac
tccttctatgatgtgaccgactgcctggagcagctggggatggagaccatcatccagaaa
cacctgaacagactggggacggagccggacctgcgggcacagttcaccacctacgagacc
gctctgcgacatgaagacggcgacgtggaggacacctcgtccctcctacggaaagaaaaa
aggaaggccggcgagcaggagggccgccggagccgccgctccagtcagaacgcgccggac
ctgctgtcccccatcagcccctttacccccctgtccccttccctttccaacaccccctcg
tccgtcacagtctcctcccccagctacatgtccgggcccgacagccggacctcatcgccg
ctgacctccgaccccggtagctcctcctccagtccatctgggtccaggaccagctccccc
ctgccccctcagcccaacggcagtgtccccccagatcagggcaagaagtcctcgagtcgc
tctttccttagtcatcacatgtcagttctggggttgaagaggaagtccaggctgttctcc
aaatccagctcagtctctgaggagccttccacaaacctcagctcgacccctcctgacctc
tcgctccaggaaaagactccatctcagctgaacagtgaacaaaccaggacggaggccaaa
agctcttcaaactcggaccctgatgacatcttttgcccggacgactgtaatatcattttg
gacaagccgattctgaagaagtatcaaggcactttcctgcgagatttggcctccaagcag
cgggaaaagaagaagtctctccatcacagccggaccaaacagctggcgtctaacgaggcc
acaccttccatcgttgagtcgggggcggagtctagtgatgtcagggtgtcagaggagcca
catgaccaaacatccgatcaggacacgcacggagagtcggagtcgcacaacgacccaggt
atgcagcgacagtgcagcacgctgtcggacgaaaagaagtttgtcctggacatgctgtac
tccaaaaactctgcagaagtgcctctgagccaggcggcgtcagaacctccaagtaccgag
gagaagagctccgtgtctgaggagcacgtatgtggtcaagtctcttcccgtctgtcggac
ttggaggcgcgctcagtggaggccgcttccccaaatgagggcagcgcctccatcaaggag
gagctggaaagcttgggaggctccgcccaggcggcgcgggcgcggctggaggaagagaag
aagcgatacctgcagcggcagcagagcagcatcgacgtggaggcgcacgccaaacggctg
gagaaaacccggatgacgccgctggaggccaaggcgccggtcgacgcctgggaccagctg
cagcccagcggcgccgacctgcgcatcaaagacctggacttctccgacctgctggacgag
gaggacatcgacgtcctggacatggacacctttgactcctcccaccccagcatcccaggc
gtcccgccccctccgccccttctgggtgcagcccgccccctgtcctccgcccccctgcag
aagaagaagacggtgaagctgttctggagggagctgaagcaggcggaccggccgcagaag
tgccgcttcggtcgggggacggtgtgggcgtccctggacaaggtggaggtggacaccgcc
cgcctcgaacagctgtttgagtccaaaaccaaggaactgtctgttaccaagaaaggaccc
gagaccaaaaaggcagagattctggttctggacccaaagaggagcaacgccatcaacatc
gggatgacggtcctgcccgccctccacgtcatcaagagcgccatcctcagctttgacgag
tttgccatcagcaaggaggggatcgagaagatcctgaccatggtccccacagaggaggag
aagcagaggatccaggaggcgcagctggccaaccccgacgtccctctgggctccgcagag
cagttcctcctgagcctggcctccatcagcgctctgacgccgcgcctgcagctctgggcc
ttcaagctcaactacgaagctctggagaaggagatcgcagagccgctgttcgacctgaag
ctgggcatggagcagctggcgtccaatcagaccttcaggaggatcctggcgacgctgctt
gccatcgggaacttcctcaacagcaccagcgtgaaaggctttgaactgggttacctggag
aaggtaacagaggtgaaggacaccgtccaccgtcagtctctgctctaccacacctgcaaa
ctggtggtggataaataccccgaatccacggacgtctactctgagattcctgccatcacc
cgctctgccaaagtagactttgagctgctgtcagagaacctggttcagctggagagacgc
tgcaaagcatcatgggacaacttgaaggtggtggccaaacacgagaccaaagcggcgctg
aagaccaagatgacggagttcctgaaggactgcactcagaggatcatcatcctgaaggtg
gtccacaggagggtcatcaacaggtttcactccttcctgctgttcctgggtcagccgtcc
tcctccgtcagagacatcaaggtgaccagtttctgccgcatcatcagcgagttcgctctg
gagtatcgcaccagccgagatcgagtgctcaccctcaaacggaaacgaaccacgcttcgg
gagcgccgcaagaccagagggaagatgatcactgagatggagaagttttccgctgctatg
cctgatctggacacgccctcccttgtttcaatggcatcagaggcagaaccagagcagcag
gaggagcacgagaacatgaagaacctgctgatcagcagctcctccagcctgtcggcagat
actcgaggcctgaggcgctcccgagccgtcagaagttttggccggagtagcccgactccg
atgtctggcgccagagacgacgggatcagctgccaggacgacgccaccgatgagatcatg
aaccgtttggtgaagacagtgagccagaatccctcacagcgaacgtccaaccccaggacc
cgcaaacgctccaacctcaacagaaagtccatcaggagaactctgaagagcggcctcggc
gtggacatggcccagatccaggagaacagcagccggcccggagagaccgtctga
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