Oryzias melastigma (Indian medaka): 112160602
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Entry
112160602 CDS
T07439
Symbol
lrp3
Name
(RefSeq) low-density lipoprotein receptor-related protein 3 isoform X1
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112160602 (lrp3)
Membrane trafficking [BR:
oml04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
112160602 (lrp3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
CUB
Motif
Other DBs
NCBI-GeneID:
112160602
NCBI-ProteinID:
XP_024151012
Ensembl:
ENSOMEG00000019750
UniProt:
A0A3B3CJP6
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Position
LG3:complement(30747804..30757156)
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AA seq
762 aa
AA seq
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MGPTEIPVRLLGAFWFGCALLCAGCSEQVEVHTERRGVIYSPSWPLNYPPGVNCSWRIQG
SQGEVITISFRNFDMAESGKCLGDWLLLAPTRSGETRLCGSVLPPPFISTRGRFWLFFHS
QANSSGQAQGFRLSYIRGHLGQSSCQSDEFLCGNGKCLPRSWKCNGQDECGDASDERSCS
PPPTQFHAGVCPLGSLPCTEAQTTRCLPAALRCNGAPDCPDRTDELGCPDTSCGKHLGNF
YGSFASPDFFRVNRSAASELRCSWLLDTQDPKPIVLQLDLQLGPRDSLHVFDGPLQSAEH
LLQVLSHHNNRRPAQLESSSGQMSVLYMAQPHSPGRGFNATYQVKGYCFPGERPCGSDQG
CYSEHQRCDGYWHCPSGRDEEGCSMCPDGEFPCDGGGRLCYPASERCNNQKRCPDGSDEK
NCYDCQPGNFHCGTNLCIFETWRCDGQEDCLDGSDERDCLAAVPRKVITAALIGSLVCSL
LLVIALGCALKLHSMRSREYRAFETQMTHMEAEFVQREAPPSYGQLIAQGLIPPVEDFPV
QNPTQASVLQNLRLAMRRQIRRHSSRRSTFASSRRRLSRLWSRLWSREGQAARSHSLLLD
PPGSTQITLGLHSYRTAGGAEDDPPRSRRSARLNQEPGSPESPPSPLSSPSVDSPEVGGG
LSPFEGQSHQRNSAHIFPPTPQFASAPPSQRRPSRKLVLELAVNLKGVSLRRSPPSGSLS
PLSPSLFPSSSQTPRGGGTPPSASTRAEGDSDVKEGSSAPIK
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggggcccacggagattccggttcggctgctgggggcgttctggttcggctgcgctctg
ctctgcgcaggctgcagtgagcaggtggaggtccacacggagcgcaggggggtcatctac
agcccctcctggcctctaaactatcccccgggggtcaactgtagctggcgcatccaggga
agtcaaggggaggtcatcaccatcagttttcgtaactttgacatggcggagtcggggaaa
tgtctgggagactggctgcttctggcccccaccaggagtggagagaccaggctgtgcggc
tccgtactgcctcctccattcatctccaccagggggcgcttttggctcttctttcactct
caggccaacagctccgggcaggcccagggcttccgcctgtcctacatcagaggtcacctg
ggtcagagcagctgtcagtccgatgagttcctgtgcgggaacgggaagtgtcttcctcgc
tcctggaagtgcaacggtcaggacgaatgcggggacgcttcagacgaacgcagctgctcc
ccgcctcccacgcagttccacgccggtgtctgccccctcggctccctgccgtgcacggag
gcccaaaccacccgctgtctgcccgccgccctgcgctgcaacggcgctccggactgcccc
gacagaaccgacgagctgggctgccccgacacttcctgcgggaaacacctggggaacttc
tacggctccttcgcctctccggactttttccgagtgaaccggagcgcggcgtctgagctg
aggtgctcgtggctgctggacacccaggaccccaagcccatcgtgctgcagctggatctg
cagctggggccccgagattctctgcacgtgttcgacgggccgctgcagagcgcagagcac
ctcctccaggtgctgtcgcatcacaacaaccggcggccggcgcagctggagtccagcagc
ggccagatgagcgtcctgtacatggcgcagcctcacagcccggggcggggcttcaacgcc
acctaccaggtgaaaggttactgttttcccggagagcggccctgcggcagcgatcagggc
tgctactctgaacaccagcggtgcgacggctactggcactgtccctccggccgagacgag
gagggctgctccatgtgtcccgacggggagttcccgtgtgacggcggcggccgactctgc
taccccgcgtcggaacgctgcaacaatcagaagagatgcccggacggttcggacgagaaa
aactgctacgactgccaacccgggaacttccactgcgggaccaacctgtgcatcttcgag
acgtggaggtgcgacggccaggaggactgcctggacgggagcgatgagagggactgcctg
gcggcggtgcccaggaaagtcatcacagcggcgctgatcggcagcctggtctgcagcctg
ctgctggtcatcgccctcggctgcgccctcaagctgcactccatgcgcagcagagagtac
agggcttttgagacgcagatgactcacatggaggcggagtttgttcagagagaggccccg
ccttcttacggtcagctgattgcccagggcctcatccctccggtggaggacttcccggtc
cagaaccccactcaggcctccgtgctgcagaacctgcgtctggcgatgcgccggcagatc
agacgccactcttccaggcgttccaccttcgcttcttctcggcgccgcctcagccggctg
tggagccgtctgtggagccgagagggtcaagcagccagaagccattccctactcctggac
ccccccggatcgactcagatcacactggggctccacagctacagaacagcgggaggggcc
gaggacgatccgccgagatcgcgccgctccgcccggttgaaccaggagcccggctcccca
gagagcccgccctcacctctgtcctccccctcagtggacagccccgaggtgggggggggc
ctctcccctttcgaaggtcagtcccatcaaagaaactccgcccacattttccctcccacc
ccccagttcgcctctgcgcctccttcccaacgccgaccctccaggaagctggttctggaa
ctcgcagtcaacctgaagggggtgtcgttgaggcgttcccccccctcggggtctctgtcc
cccctctccccctccttatttcccagcagctctcaaacacctcgcggtggggggacgccc
ccttctgcttccaccagggctgagggggacagtgacgtcaaggagggctcgtctgcgccc
atcaagtga
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