Oryzias melastigma (Indian medaka): 112160625
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Entry
112160625 CDS
T07439
Symbol
hoxa13a
Name
(RefSeq) homeobox protein Hox-A13a
KO
K09298
homeobox protein HoxA/B/C/D13
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112160625 (hoxa13a)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
112160625 (hoxa13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HoxA13_N
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
112160625
NCBI-ProteinID:
XP_024151047
Ensembl:
ENSOMEG00000018800
LinkDB
All DBs
Position
LG11:7829486..7832208
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AA seq
299 aa
AA seq
DB search
MTTSLLLRPRWVDPSVMFLYDNGGGSDEVSKNMEGFAGGNFAANQCRNLMAHPASLAPST
AYSSSDVPAPGMGEPVKQCSPCSAAPNSSSASLPYGYFGYPCRMSHHSSIKSCAAPSAPA
YGEKYVDTSTSGDEFTPRAKEFTFYPTYTSSPYQPVPSYLDVPVVPTISAPSETRHEPLL
PMESYQPWTLASNGWNSPVYCAKEQPQPAHVWKSSISDAASHIGGESGSYRRGRKKRVPY
TKVQLKELEREYAANKFITKDKRRRISAQTNLSERQVTIWFQNRRVKEKKVVNKLKTIS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgtcactgctcctccgtcctcgctgggtcgacccgtcggtgatgttcctgtac
gacaacggcggcggttccgacgaagtgagcaagaacatggagggttttgctggtggcaac
tttgctgcgaaccagtgcaggaatctgatggctcaccccgcgtccctggcacccagcacg
gcgtactcgtccagcgacgtgcccgcccccggcatgggggagccggtgaagcagtgcagc
ccctgctctgcagctcccaattcctccagcgcgtcccttccgtacggctacttcggttac
ccgtgcagaatgtcgcatcacagcagcattaagtcatgtgcagcaccgtccgcgcccgcc
tatggagagaagtacgtggacacgtccacctcgggcgacgaattcacccctcgagcgaag
gaatttactttttatccaacttacacttcgagtccataccaacctgttccgagttacctg
gacgttcccgtggtgccaacgatcagtgcgccgtcagagaccaggcacgaacccctcctg
cccatggagagctatcagccatggactctcgcttccaacggctggaacagcccggtttac
tgcgccaaggagcagcctcagcccgcacacgtgtggaaatcctccatatcagacgccgcg
tcgcacatcggaggagagtctggctcttatcgccgtggaaggaagaagcgcgtgccatac
accaaggtgcaactgaaggagctcgagcgcgagtacgccgccaataaatttatcacaaag
gacaaaaggaggaggatatccgcgcagaccaacctgtctgagcgacaggtcacgatatgg
ttccaaaacagacgcgtgaaggagaagaaagttgtcaacaaactgaaaaccatcagctag
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