Oryzias melastigma (Indian medaka): 112160667
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Entry
112160667 CDS
T07439
Symbol
lrrc4cb
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112160667 (lrrc4cb)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
ig
V-set
LRR_9
Ig_2
LRRNT
Ig_6
Egh16-like
Syndecan
Motif
Other DBs
NCBI-GeneID:
112160667
NCBI-ProteinID:
XP_024151145
Ensembl:
ENSOMEG00000004334
LinkDB
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Position
LG3:complement(303999..386010)
Genome browser
AA seq
631 aa
AA seq
DB search
MPNTMISSLQHQTMRGHRLKGALSNPLFVLLLALHILVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRSIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISELAFKDLSNLRYLNLGMCNLKEIPNIIPLVKLEELEMSGNQLTIVKPSSF
TGLANLQKLWMMHSQVQTIERNSFDDLQSLVELNLAHNNLTFLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKETVPANTSCCARCHTPSVFKGRYIGELDHSYFQCDVPVIVEP
PSDLNVTEGMGAELKCRTNSMTSISWLTPNGSMVTHGAYKVRLSVLNDGTLNFTSVTMQD
TGTYTCMVSNTAGNISASAVLNVTSVENNGVTYFTTVTVETIETPGDDSQTPLPPFGWVS
SSTTKGPPVSTRTTEWTYIIPVTSTDGEGALNGLDEVMKTTKIIIGCFVAITLMAAVLLV
IFYKMRKQHNQQDPDGPASSMEVITVEEELAGVAAMERHLSLPPLEHYNHYNTYKSTYHH
PPMLSTIHSSATQEPLLIQACSKDNVQETQI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgccgaacacaatgatttcctccctccagcaccagacaatgagaggtcatagactgaag
ggggcattgtcaaacccccttttcgtgctgcttttggcccttcacatcctggtggtggct
gggctggtccgcgctcagacctgcccatcagtctgctcatgcagcaaccaattcagcaaa
gtcatatgtactcgccggggtctacgggatgtcccagatggcatttccaccaacactcgc
tacctgaaccttcaggataatctcattcaggtcatcaaagtggacagcttcaaacatcta
cgtcatctggaaattctacagctgagtaagaaccacattcgcagcattgaaattggcgcc
tttaacggccttgccagtctcaacactttggagttgtttgacaaccgactaacgacaatc
cctaatggagcgtttgagtacttgtctaaactgaaggaattgtggctacgaaacaacccc
atcgaaagtataccatcttatgccttcaatcgagttccatcgcttcggaggttagatctt
ggtgagctcaaacgtttgtcctacatttctgagttggctttcaaagacttgagtaacctg
cgctacctgaacctgggaatgtgcaaccttaaggaaatacccaacatcatacctttagtt
aaactggaagagctggaaatgtccggaaaccaactcactatagtgaagcccagctcgttc
acagggttagcaaatctccagaagctgtggatgatgcactcccaggtccagaccattgag
aggaactcctttgatgaccttcaatcactggtggagctcaacttggctcacaacaacctc
acctttctaccacatgacctcttcacaccattgcaccacctggagagagtccatctccat
cacaacccttggaactgcaactgtgatattctgtggctcagctggtggctcaaggaaact
gtacctgccaataccagctgctgtgcacgctgccacactccttcggtctttaaaggtcgc
tacatcggggagctggaccacagctacttccagtgtgatgttcctgttattgtggagcca
cccagcgacttgaatgtgacagaaggcatgggagccgagctaaaatgccgtacaaactcc
atgacctccatcagctggctcacaccaaatggctctatggtgacgcatggagcatataaa
gtacgtttgtctgtactcaatgacgggacgctgaacttcactagcgtcacaatgcaggac
actgggacctacacctgcatggttagcaacacagcgggcaacatttctgcttctgctgtg
cttaatgtcacttctgtggaaaacaacggggtgacctatttcaccacagtcaccgtggag
accattgaaacccctggggatgatagccaaacaccactccccccatttggctgggtgtca
tcctcaactacaaagggtccgcctgtttcaacaaggaccacagagtggacttacatcatt
ccagttacttctacggacggagagggtgccctgaatggcctggacgaggtcatgaaaaca
accaagatcatcatcggctgctttgtggccatcacgctgatggctgccgttctgttggtt
attttctacaagatgaggaagcagcataaccagcaggacccggatggtcccgcctcctcc
atggaggtcattactgtggaagaagagcttgcaggtgttgctgccatggagagacaccta
tcgctgccccctttggagcactacaaccactacaacacatacaagagcacttatcaccac
cctcctatgctcagtaccatacacagctcagccacacaggaaccgttattgattcaagcc
tgctctaaagacaatgtgcaagagacccaaatctga
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