Oryzias melastigma (Indian medaka): 112160676
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Entry
112160676 CDS
T07439
Symbol
lmnl3
Name
(RefSeq) lamin L3
KO
K12641
lamin A/C
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04210
Apoptosis
oml04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112160676 (lmnl3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112160676 (lmnl3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112160676 (lmnl3)
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
112160676 (lmnl3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
LTD
DUF6687
Motif
Other DBs
NCBI-GeneID:
112160676
NCBI-ProteinID:
XP_024151165
Ensembl:
ENSOMEG00000022821
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Position
LG3:35229132..35237230
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AA seq
622 aa
AA seq
DB search
MNSSDLSSISCEREPAQRQRRESRSSRFSSGRPPAPAAPPGRSAMASATSTPAARSSSRG
RRSARSPARMQEKEELRHLNDRLANYIQRVQDLESDKTVMLLQLREQEEATARETAAVRR
LYDEELADVRRCLDALAAERARLQIEHGNLQEEFQKLQSRNQKKESDLANALTQWRKTEA
MLSAKEAENAKLLSENGRLGGDAADLQLQLENVERLLAETKNQLSSEILRRVGMENQVQT
LKEQLELQKNISKQEILEVRSRQETRLVEVESGRRREFESKLAETMQQLREDHTFQLHQY
KEEMEKTFSTKLQNAQDAAEEKTVSMTTTKEELEVFRRRLESLSTQLQQNQREKLVLEDR
FQELQRTLDQERDAWQQKSSQKEQELLSMRTQMDNQLENYQNLLDVKLSLDMEINAYRKM
LEVEEQRLQLSPSPSSHAAVPRVQERRKLRGRKRKHEEAGRSSPAYKMSRRSVRTEAVTV
TEVDGKYVRIKNNSDKEQPLGGWVVRRVHPDSGDVSFQFPPSFVLAGGRSLTIWSSGAAQ
EAEPGDAVLENHSSWGAVADLRVVLLNPNHEEVSACWLSVQTTDQDDPEDGGLDFDDVFI
AGSDGQRFHRQDLSKEASCCVM
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaactcatcagatttaagcagcatcagctgtgagcgtgaacccgcacagagacagagg
cgtgaatcccgcagctcgcggttctcctccggacgccctcccgcaccggctgcccccccc
ggccgctccgccatggcctccgccacctccacgcccgccgcccgcagcagcagccgcggc
cgccgcagcgcccgcagcccggcccgcatgcaggagaaggaggagctgcggcacctgaac
gaccgcctggccaactacatccagcgggtccaggacctggagagcgacaagaccgtcatg
ctgctgcagctgcgggagcaggaggaggccacggcgcgggagacggccgccgtgcggcgc
ctgtacgacgaggagctggccgacgtccgccgctgtctggacgcgctggcggcggagcgg
gcccgcctgcagatcgagcacgggaacctgcaggaggagttccagaaacttcagagcagg
aaccagaagaaggagtcggatctggccaacgccctgacccagtggaggaagactgaagcg
atgctgagcgccaaggaggcggagaacgccaagctgctgtcggagaacgggagactgggc
ggcgacgccgccgacctgcagctgcagctggaaaacgtggagcgtttgctggcagagacg
aagaaccagctgagttctgagatcttaagacgggttggaatggagaaccaggtccagacg
ctgaaggagcagctggaacttcagaagaacatcagcaaacaggagatcctggaggtccgg
agccggcaggagactcgcctggtggaggtggagtcaggacggcggcgagagttcgagagc
aaactggcggagacgatgcagcagctgcgagaagatcatacgttccagctgcaccagtac
aaggaggagatggagaagaccttcagcaccaagctgcagaacgcccaggatgcggccgag
gagaagaccgtctccatgacgaccaccaaggaggagctggaggtcttcaggaggaggctg
gagtcgctcagcacgcagctgcagcagaaccagagagagaaactggttctggaagaccgg
ttccaggagctgcagaggactctggaccaggagcgggacgcctggcagcagaagtccagt
cagaaggagcaggagctgctgagcatgaggacccagatggacaaccagctggagaactac
cagaacctgctggacgtcaagctgtctctggacatggagatcaacgcctacaggaagatg
ctggaggtggaggagcagaggttgcagctgtcccccagcccctccagccacgccgccgtt
cctcgcgttcaggagcgccgtaaactccgagggaggaagcggaaacacgaagaagctggc
aggagttctcctgcctacaagatgtcccgccgatccgtgaggacggaagccgtgacggtg
accgaggtggacgggaaatacgtcagaatcaagaacaactccgacaaggagcagcccctc
ggcggttgggtcgttcgccgcgtacatccagactctggagacgtctccttccagttcccc
ccctcctttgtcctggctggggggcggagcctcacaatctggtcatcaggagcggcacag
gaggcggagcctggggacgcggtactggagaaccacagctcctggggggccgtcgccgac
ttgagggtcgtccttctgaaccccaaccacgaggaggtgtccgcctgctggctgagcgtc
cagaccacagaccaggacgacccggaggacggcggcctcgactttgacgacgtcttcata
gcaggaagtgacgggcagcgcttccaccggcaggatctctccaaggaggccagctgttgc
gtcatgtga
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