Oryzias melastigma (Indian medaka): 112160715
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Entry
112160715 CDS
T07439
Symbol
tpma
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04260
Cardiac muscle contraction
oml04261
Adrenergic signaling in cardiomyocytes
oml04814
Motor proteins
oml04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112160715 (tpma)
04820 Cytoskeleton in muscle cells
112160715 (tpma)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
112160715 (tpma)
04261 Adrenergic signaling in cardiomyocytes
112160715 (tpma)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112160715 (tpma)
04147 Exosome [BR:
oml04147
]
112160715 (tpma)
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
112160715 (tpma)
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of microglial cells
112160715 (tpma)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
CCDC39
Sec2p
DUF745
Rod_CreS
DUF3450
PUMA_CC
TMF_DNA_bd
Lebercilin
HAUS1
Laminin_I
ATG16
CENP-F_leu_zip
FKBP15
ERM_helical
DUF16
CC_Bre1
SlyX
AAA_13
DUF1664
TMP_N
Fez1
Motif
Other DBs
NCBI-GeneID:
112160715
NCBI-ProteinID:
XP_024151232
Ensembl:
ENSOMEG00000012616
LinkDB
All DBs
Position
LG3:23517141..23524513
Genome browser
AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAESDKKAAEDRSKQLEDDLVALQKKLKATEDELDKY
SEALKDAQEKLELAEKKATDAEGDVASLNRRIQLVEEELDRAQERLATALTKLEEAEKAA
DESERGMKVIENRAMKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTE
ERAELSEGKCSELEEELKTVQNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcaagaagaagatgcagatgctcaagctcgacaaggagaacgccttggac
agagctgagcaggccgagtcagacaagaaagcagctgaggacagaagcaaacagcttgag
gatgacctggtagcactgcagaagaagctgaaggcaactgaggatgagttggacaagtac
tctgaggccttgaaggatgcccaggagaaacttgagctcgccgagaagaaagccacagat
gctgagggagatgtagcctccttgaacagacgtatccagctggttgaggaggagttggac
cgtgctcaggagcgtctggccacagctcttaccaagctggaggaggctgagaaggctgct
gatgagagtgaaagaggcatgaaagtcattgagaacagggcgatgaaggacgaggagaag
atggaactgcaggagatccagctgaaggaagccaaacacatcgctgaggaggctgaccgt
aaatacgaggaggttgcccgtaagctggtgatcattgagagcgacttggaacgtacagag
gagcgcgctgagctgtctgaaggcaaatgctctgaacttgaggaggagctgaaaactgtg
cagaacaacctgaagtctctggaggctcaggcagagaagtactcgcaaaaggaagacaag
tatgaggaggagatcaaggttctcacagacaagctcaaggaggctgagacccgtgctgag
tttgctgagagatcagtcgccaagcttgagaagaccattgatgaccttgaggatgagctg
tatgcccagaagctgaagtacaaggccatcagcgaggagctggaccatgccctcaacgac
atgacatccatctaa
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