Oryzias melastigma (Indian medaka): 112160726
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Entry
112160726 CDS
T07439
Symbol
tle3b
Name
(RefSeq) transducin-like enhancer protein 3-B isoform X1
KO
K04497
groucho
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04310
Wnt signaling pathway
oml04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112160726 (tle3b)
04330 Notch signaling pathway
112160726 (tle3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112160726 (tle3b)
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
ADF / Cofilin
SCMC complex
112160726 (tle3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TLE_N
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WD40_WDHD1_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
HALZ
TFIIA
Beta-prop_IP5PC_F
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
112160726
NCBI-ProteinID:
XP_024151255
Ensembl:
ENSOMEG00000008528
LinkDB
All DBs
Position
LG3:complement(9682650..9719070)
Genome browser
AA seq
783 aa
AA seq
DB search
MYPQGRHPAPHQPGQPGFKFTVAESCDRIKDEFQFLQAQYHSLKVEYDKLANEKTEMQRH
YVMYYEMSYGLNIEMHKQTEIAKRLNAILAQIMPFLSQEHQQQVAQAVERAKQVTMTELN
AIIGVRGLPNLPLTQQQLQAQHLSHAAHGPPVQLPPHPSGLQPPGLPPVTGAGSGLLALG
ALGSQAHLPVKDEKNHHDLEHRGPSSFHSPLVIPLKERETSTNNSVSPSDSLRAASEKHR
SSSDYGLDSKKRKVDDKDSMSRYDSDGDKSDDLVVDVSNEDPATPRVSPAHSPPENGLDK
SRVLKKDAAPNSPASVASSGSTPSSKAKDHAHNEKSSTPSLKSNTPTPRNEVPTPGTSTT
PGLRPLTMGKPPGMEALTAPALRTPLSYASPFAMMGPHEMNGSLTSPGVYPGLISPQISA
AAAAAYGRSPIAGFDPHPHMRAPGLPAGLTSISGGKPAYSFHVSADGQMQPVPFPPDALI
GPGIPRHARQINTLSHGEVVCAVTISNPTRHVYTGGKGCVKIWDISQPGSKSPVSQLDCL
NRDNYIRSCKLLPDGRTLIVGGEASTLTIWDLASQTPRIKAELTSSAPACYALAISPDAK
VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISHDGTKLWTGGLDNTVRSWDLRE
GRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHHTKPDKYQLHLHESCVLSLKFA
YCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE
VIY
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgtatccacaaggccggcatccggcacctcaccagccagggcagcctggcttcaagttt
acagtggcagagtcttgtgatcggatcaaagacgaatttcagttcctgcaggcccagtac
cacagtctcaaagtggagtacgacaaactggccaacgaaaagaccgaaatgcagcgtcat
tatgtcatgtactatgaaatgtcctacgggctcaacattgagatgcacaaacagactgag
attgccaaacgcctcaatgcaattctggcacagatcatgccattcttgtcacaagagcat
caacagcaggtagctcaagctgttgagcgggctaagcaggtgaccatgactgagctgaat
gctatcatcggggtacgtggacttcccaatctgcctctgactcagcaacagcttcaggct
cagcacctgtcccacgctgcccacggccccccggtccagctgccccctcatccctcaggc
ctgcagccgcctggcctccccccggtgacaggcgccggctcgggcttgctcgctctgggt
gctctcggcagccaggctcacttgcctgtaaaagatgagaaaaaccaccatgacctggag
cacagaggtccctcatcctttcactcgcctctggttatccctctaaaagaacgcgagacc
agcacgaataactctgtgtcgccgtcggacagcctgcgggcggcgagcgagaagcaccgc
agctcttcagactacggcctggactccaagaaacgcaaagtggacgataaagacagcatg
agcagatatgacagcgacggagacaagagcgatgacctggtggtggacgtttctaatgag
gatccagcaacccctcgggtgagccccgctcactcgcccccagaaaacggcctggataag
tcacgagtgctgaagaaggacgctgcccccaacagccccgcctctgtcgcctcctccggc
agcacaccgtcctcaaaggctaaagaccacgcccataatgagaaatcgtccacaccaagc
ctgaaatccaacacgcctacaccgaggaacgaggtccctacaccagggaccagcaccact
ccaggactgcgccccctaaccatgggaaaaccacctggcatggaagcattaactgccccc
gccctgcgcacacctctgtcgtacgctagtccgtttgccatgatgggtcctcatgagatg
aacgggtccctgaccagccctggagtctacccgggtctcatttctcctcagataagcgct
gctgccgctgctgcatacggacgttctccaattgcgggttttgaccctcatccccacatg
agagcccctggcctgcctgcaggcctgacctctatctctggtggaaaaccagcttattcc
tttcacgtcagcgcggacggtcagatgcagcctgtgcccttccctccagacgccctgata
gggccgggcatcccgcgccacgctcgccagatcaacactctgagccacggggaagtagtg
tgtgccgtcaccatcagtaatcccacccgtcacgtctacaccggcggcaaaggttgtgtc
aagatttgggacatcagccaaccaggcagcaagagcccggtgtcccagcttgactgcttg
aatcgagacaattacatccgctcctgcaagctgttgcctgatggccgcaccctgattgtt
ggcggtgaggccagcacactgaccatctgggacttggcctcgcagacgccacgcataaag
gccgagctcacgtcctctgctccggcctgttacgcgctggccatcagccccgacgccaaa
gtctgcttctcctgctgctctgacggaaacatcgccgtgtgggacctccataaccagaca
cttgttaggcagtttcagggccacacagatggagccagctgcatcgatatttcccatgac
gggaccaagctgtggaccggaggactcgacaatacggtccggtcctgggatctgagggag
ggccggcagctccagcaacacgactttacctcacagatcttctcattgggctactgtccc
actggggagtggctcgccgtgggaatggagagcagcaatgtggaggttcttcaccacacc
aagcctgacaagtaccagctgcatctgcacgaaagctgcgtcctctcactcaagttcgcc
tactgtggcaaatggtttgtgagcacagggaaggacaacctgctgaacgcttggaggact
ccttatggcgccagcatatttcagtcaaaggagtcgtcctcggtcttgagctgcgacatc
tcagcagatgacaaatacatcgtaacaggatccggggacaagaaggccactgtctacgag
gtcatctactag
DBGET
integrated database retrieval system
