KEGG   Oryzias melastigma (Indian medaka): 112160738
Entry
112160738         CDS       T07439                                 
Symbol
top2b
Name
(RefSeq) DNA topoisomerase 2-beta
  KO
K03164  DNA topoisomerase II [EC:5.6.2.2]
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oml03032]
    112160738 (top2b)
   03036 Chromosome and associated proteins [BR:oml03036]
    112160738 (top2b)
Enzymes [BR:oml01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     112160738 (top2b)
DNA replication proteins [BR:oml03032]
 Eukaryotic type
  DNA Topoisomerases
   112160738 (top2b)
Chromosome and associated proteins [BR:oml03036]
 Eukaryotic type
  Chromosome condensation proteins
   Other regulators of chromosome condensation
    112160738 (top2b)
  Centrosome formation proteins
   Centriole proteins
    112160738 (top2b)
SSDB
Motif
Pfam: DNA_topoisoIV TOPRIM_C DNA_gyraseB DTHCT Toprim HATPase_c DUF4689 Microp_apicomplexa_20
Other DBs
NCBI-GeneID: 112160738
NCBI-ProteinID: XP_024151279
Ensembl: ENSOMEG00000021187
UniProt: A0A3B3DWH5
LinkDB
Position
LG11:complement(18680501..18697109)
AA seq 1594 aa
MSNGAAGSGDLSWMEAANGRGDVGKMEGTKKEKAGSKLSVERVYQKKTPLEHILLRPDTY
VGSVEPVTQPMWVFDEDVGMNQREITYVPGLYKIFDEILVNAADNKQRDKNMSAIKITID
PESNTITIWNNGKGIPVVEHKDEKMYVPALIFGHLLTSSNYDDDEKKVTGGRNGYGAKLC
NIFSTKFTVETACKEYRRSFKQTWQNNMTKTTEQKIRAFDGDDFTCVTFQPDLAKFKMEK
LDKDTVALMTRRAYDVAGSVKGVKVTLNGKKLPVHGFRSYVDLYVKDKVDETGVPLKVVN
ETVNDRWEVCLTMSEKGFQQISFVNSIATTKGGRHIDYVVDQIVSKLIEVVKKKNKAGVV
VKPFQVKNHIWVFVNALIENPTFDSQTKENMTLQTKSFGSKCVMSEKFIRAATNCGIVES
ILNWVKFKAQTQLNKKCSSVKHSKIKGIPKLDDANDAGGKHSSECTLILTEGDSAKSLAV
SGLGVIGRDRYGVFPLRGKILNVREATHKQIMENAEINNIIKIVGLQYKKSYDDPESLRS
LRYGKIMIMTDQDQDGSHIKGLLINFFHHNWPSLLKHTFLEQFITPIVKATKNKQELSFY
SLPEFEEWKKQTESYKTWHIKYYKGLGTSTSKEAKEYFADMERHRITFRYQGAEDDAAIT
LAFSKKKTDDRKEWLTNFMEDRRQRRMHGLPEKYLYGTQTKHLSYNDFINKELILFSNSD
NERSIPSLVDGLKPGQRKVLFTCLKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVN
LAQNFVGSNNINILQPLGQFGTRINGGKDAASPRYIFTMLSPLAKLLFPAVDSNLLKFLY
DDNQKVEPEWYIPIIPMVLVNGAEGIGTGWACKIPNYDPREIVNNINRMLNHQDPLPMLP
SYKNFKGVIHELGQNQFLVSGEVSVLDKNTVEITELPVRTWTQAYKESVLEPMLQGTDKT
PALISDYKEYHTDSTVKFVVRMSEEKLAQAEAVGLHKVFKLQSSLTCNSMVLFDHMGCLK
RYDSVQDILKEFFELRLHYCKLRKDWLQGSLGAEAAKLSNQARFVLEKIEGKISIENKSK
RELIRMLVQKGYESDPVAAWSKAQEKSQEEAETDGNLSDSSMDSGSSSGPNFNYILNMPL
WCLTKEKVEELLKQRDLKRGELADLQKKSPEDLWKEDLAIFIEELDNVEAQEREEQSAGR
AIKLVKGKVGKPKAKKMNLEETMPSPFGRRVDPPSQPVKSDAAKKLSKKKKPELDQVKLE
FDDDEGGAAAAAENSVSKPKTPRVKKEKKEPGAPRVRKQPTPKGTPAKKVKKRNPWSDDE
SKSESDLEENEPIIPRETKSQRASASKPKYTFDFSEEEDEEDEAADEEEKGGDDAASSPV
RSLKDDFGFSENKSRFNDDDDEEEELEVSFNPPKPKKPVPAKKETTSSFSSKTAFSEKSN
DSDGSKSDSDDDNGPVFNTYSSSSAFDKLSQSKKGTKKPSNPTPKPKKTPAAKAKKPDKS
IWDSDSDTGSKKSSATPKGKGRGRKRKGSGSEDEYSPVKKTSKPPGRKPPSDDDEDNSNG
LSAVSRLTQEQPGRARKEIKYFNIMDDDDDEMFD
NT seq 4785 nt   +upstreamnt  +downstreamnt
atgtctaacggcgctgcggggagcggggatctgtcctggatggaggctgccaacggcaga
ggagatgtgggaaagatggaagggaccaagaaggagaaggcaggctctaagctgtcagtg
gagcgagtgtaccagaagaagactcctctcgagcacatcctgcttcgtcctgacacctac
gtgggctcagtggaacctgtcactcagccaatgtgggtctttgatgaagacgtggggatg
aatcagagggagattacttatgttcctggactctacaagatctttgatgaaattcttgtt
aatgcagcagacaacaaacaaagggacaagaacatgtcagccatcaagatcaccatcgac
cctgagtccaacaccatcaccatctggaacaacgggaagggcattccggtggtggagcac
aaagacgagaagatgtacgttccagcgctcatcttcggacatctgctcacctccagcaac
tatgatgacgacgagaagaaggtcacaggtggaaggaacggctacggcgccaaactctgc
aacatcttcagcaccaagttcaccgttgaaacagcctgcaaagagtacagacgcagtttt
aagcagacgtggcagaacaacatgacgaagaccacggagcagaagatcagggctttcgat
ggggacgacttcacctgcgtgactttccagcccgatctagccaagttcaagatggagaag
ctggacaaggacactgtggccctgatgacccgcagagcgtatgacgtagctggctccgtc
aagggggtgaaggtcaccctgaacgggaagaaattacctgtccacggcttccggagttac
gtggacctgtacgtgaaagacaaagtggatgagacgggcgtgcctctgaaggtggtgaac
gaaacggtgaacgatcggtgggaggtgtgcctcaccatgagcgagaagggcttccagcag
atcagctttgtcaacagcatcgccaccacaaaggggggcagacacatcgactatgtggtg
gaccagattgtgtccaaactcattgaagtagtgaagaagaagaacaaagcaggagtggtg
gtgaaacccttccaggtgaagaaccacatttgggtttttgtcaacgcactgatcgagaat
ccaacctttgactcccagaccaaggagaacatgactctacaaaccaaaagctttggttcc
aagtgtgtcatgtcggagaagttcatcagagctgccaccaactgtgggattgtggagagc
atcctgaactgggtgaagttcaaagctcagactcagctgaacaaaaagtgctcgtctgtg
aagcacagcaagatcaaaggcatcccgaagctggacgacgccaacgacgccgggggtaaa
cactcgtccgagtgcacactcatcctcaccgagggagactcggccaagtccctggccgtc
tccggtctgggagtcatcggtcgggatcgttacggagttttcccgctcagagggaagatc
ctgaacgtccgggaggcaacacacaagcagatcatggagaacgcagagatcaacaacatc
atcaagatcgtgggtctgcagtacaagaagagctacgacgaccccgagtctctgaggagc
ctacgatacggaaagatcatgatcatgacggatcaggatcaggacggctcccatataaag
ggtctcctcatcaatttcttccatcacaactggccctcactgttgaaacacaccttcctg
gagcagttcatcactcccatcgttaaagcgactaagaacaaacaggagctctccttctac
agtcttcctgagtttgaggagtggaagaagcagacggaaagctataaaacctggcacatc
aagtactacaaaggtttgggtacaagcaccagcaaagaggccaaggagtactttgctgac
atggagagacaccggatcacattcagataccagggggccgaggacgacgccgccatcacg
ctggcctttagcaaaaagaagactgacgacaggaaggagtggctgacgaacttcatggag
gaccgacggcagaggaggatgcacggcctgccggagaaatacctgtatggaacgcagacc
aagcacctgtcctacaacgacttcatcaataaggagctcattctcttctccaactctgac
aacgagaggtccattccttctctggtggacggtttaaagccgggccagaggaaggtgttg
ttcacctgcttgaagaggaacgataagagggaggtgaaggtggcccagctggctggttct
gtggcagagatgtctgcttaccatcatggagagcaagctctcatgatgaccatcgtgaac
ttggcgcagaacttcgtgggcagcaacaacatcaacatcctgcagcctctgggtcagttt
ggtactcgcatcaacgggggcaaagacgccgccagtcctcgttacatcttcaccatgctc
agccccctcgccaagctgctgttcccggctgtggactccaacctgctcaagttcctgtac
gacgacaaccagaaggtggagcctgagtggtacattcccatcatccccatggtgctggtg
aacggcgcagagggcatcgggacggggtgggcctgcaaaatcccaaactacgacccccga
gagatcgttaataacatcaacaggatgctcaaccaccaggaccccctcccgatgcttccc
agttacaagaacttcaaaggagtgatccatgaacttggccagaaccagttcctggtcagt
ggggaagtgtcggttctggacaaaaacacagtcgagatcacagaacttcctgtgcggacg
tggacgcaggcctacaaggagtccgtcctggagcctatgctgcaaggaaccgacaagacc
cccgccctgatcagcgactacaaggagtaccacacggactccaccgtcaagttcgtggtg
cgcatgtcagaggagaagctggctcaggcggaggccgtcgggctccacaaagtcttcaag
ctgcagtccagcctcacctgcaactccatggtgctgttcgaccacatgggctgcttaaag
aggtacgactcggtccaggacatcctgaaggagttctttgagctgcgcctgcactactgc
aagctcaggaaggactggttacagggcagcctaggggccgaggcggccaaactgtccaac
caggctcgctttgtgctcgagaagatcgaaggaaagatttcaatcgagaacaaatccaag
cgagaactcatccgcatgctggtgcagaaaggctacgagtcggatcctgttgccgcctgg
tcaaaggctcaggaaaagtctcaggaggaagcagagactgacgggaacctgagcgacagc
tcgatggactcgggctcttcgtctggaccgaacttcaattatatcctcaacatgcctctg
tggtgcctgaccaaggagaaggtggaggagctgctgaagcagagggatttgaagagaggt
gagctggctgatctgcagaagaagtctcctgaggatctgtggaaggaagatttggcgatc
ttcattgaggagctggataacgtagaagcccaggagagagaggagcagagtgcaggccgg
gccatcaagctggtgaagggaaaagtcggcaaacctaaagccaagaagatgaacctggag
gagaccatgccttcaccgtttggacggcgggtggaccctccctctcagccggtcaaatcc
gatgcagccaagaaactgtccaaaaagaagaagcctgaactggaccaagtgaagctggag
tttgatgatgacgagggaggagccgccgccgccgccgagaactctgtgagcaaacccaaa
actcctcgagtcaagaaggagaagaaggagccaggagcgcccagagtgaggaagcagccc
acacccaaaggtactcctgcaaagaaggtgaagaagagaaacccctggtctgatgacgag
tccaagtccgagagcgacctggaggagaacgagcccatcattcccagagagaccaagtct
cagagagcgtcagcttccaaaccaaaatacacatttgacttctctgaggaagaggatgag
gaggacgaggcggcagacgaagaggagaagggaggcgacgatgcagcctcgtctccagtg
aggtcactgaaagatgactttggattctctgagaacaagagtcgcttcaacgacgatgac
gacgaggaagaggagctggaagtctccttcaatccacccaagccgaagaaaccggtgcca
gctaaaaaggagacgaccagcagcttctcgtccaagacggccttctccgagaagagcaac
gacagcgacggctccaagtccgacagcgacgacgacaacggtccagtcttcaacacctac
tccagcagctccgcctttgacaaactgtcccagtcaaagaaagggaccaagaaaccctcc
aacccaactcccaaacccaagaaaacaccagcagcaaaagcaaagaaaccggataaatcc
atctgggactctgattccgacaccggctccaagaagtcgtcagcaacccccaaaggtaaa
ggacggggaaggaagaggaagggatctggatctgaagatgagtacagtccagtgaagaag
acttcaaaacctccgggcagaaaacctccgtctgacgacgacgaagacaacagcaacggc
ctgagcgccgtcagcaggctcacccaggagcagccgggccgcgctaggaaggaaataaag
tacttcaacattatggacgacgacgacgacgagatgttcgattaa

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