Oryzias melastigma (Indian medaka): 112160738
Help
Entry
112160738 CDS
T07439
Symbol
top2b
Name
(RefSeq) DNA topoisomerase 2-beta
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oml03032
]
112160738 (top2b)
03036 Chromosome and associated proteins [BR:
oml03036
]
112160738 (top2b)
Enzymes [BR:
oml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
112160738 (top2b)
DNA replication proteins [BR:
oml03032
]
Eukaryotic type
DNA Topoisomerases
112160738 (top2b)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
112160738 (top2b)
Centrosome formation proteins
Centriole proteins
112160738 (top2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
Toprim
HATPase_c
DUF4689
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
112160738
NCBI-ProteinID:
XP_024151279
Ensembl:
ENSOMEG00000021187
UniProt:
A0A3B3DWH5
LinkDB
All DBs
Position
LG11:complement(18680501..18697109)
Genome browser
AA seq
1594 aa
AA seq
DB search
MSNGAAGSGDLSWMEAANGRGDVGKMEGTKKEKAGSKLSVERVYQKKTPLEHILLRPDTY
VGSVEPVTQPMWVFDEDVGMNQREITYVPGLYKIFDEILVNAADNKQRDKNMSAIKITID
PESNTITIWNNGKGIPVVEHKDEKMYVPALIFGHLLTSSNYDDDEKKVTGGRNGYGAKLC
NIFSTKFTVETACKEYRRSFKQTWQNNMTKTTEQKIRAFDGDDFTCVTFQPDLAKFKMEK
LDKDTVALMTRRAYDVAGSVKGVKVTLNGKKLPVHGFRSYVDLYVKDKVDETGVPLKVVN
ETVNDRWEVCLTMSEKGFQQISFVNSIATTKGGRHIDYVVDQIVSKLIEVVKKKNKAGVV
VKPFQVKNHIWVFVNALIENPTFDSQTKENMTLQTKSFGSKCVMSEKFIRAATNCGIVES
ILNWVKFKAQTQLNKKCSSVKHSKIKGIPKLDDANDAGGKHSSECTLILTEGDSAKSLAV
SGLGVIGRDRYGVFPLRGKILNVREATHKQIMENAEINNIIKIVGLQYKKSYDDPESLRS
LRYGKIMIMTDQDQDGSHIKGLLINFFHHNWPSLLKHTFLEQFITPIVKATKNKQELSFY
SLPEFEEWKKQTESYKTWHIKYYKGLGTSTSKEAKEYFADMERHRITFRYQGAEDDAAIT
LAFSKKKTDDRKEWLTNFMEDRRQRRMHGLPEKYLYGTQTKHLSYNDFINKELILFSNSD
NERSIPSLVDGLKPGQRKVLFTCLKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVN
LAQNFVGSNNINILQPLGQFGTRINGGKDAASPRYIFTMLSPLAKLLFPAVDSNLLKFLY
DDNQKVEPEWYIPIIPMVLVNGAEGIGTGWACKIPNYDPREIVNNINRMLNHQDPLPMLP
SYKNFKGVIHELGQNQFLVSGEVSVLDKNTVEITELPVRTWTQAYKESVLEPMLQGTDKT
PALISDYKEYHTDSTVKFVVRMSEEKLAQAEAVGLHKVFKLQSSLTCNSMVLFDHMGCLK
RYDSVQDILKEFFELRLHYCKLRKDWLQGSLGAEAAKLSNQARFVLEKIEGKISIENKSK
RELIRMLVQKGYESDPVAAWSKAQEKSQEEAETDGNLSDSSMDSGSSSGPNFNYILNMPL
WCLTKEKVEELLKQRDLKRGELADLQKKSPEDLWKEDLAIFIEELDNVEAQEREEQSAGR
AIKLVKGKVGKPKAKKMNLEETMPSPFGRRVDPPSQPVKSDAAKKLSKKKKPELDQVKLE
FDDDEGGAAAAAENSVSKPKTPRVKKEKKEPGAPRVRKQPTPKGTPAKKVKKRNPWSDDE
SKSESDLEENEPIIPRETKSQRASASKPKYTFDFSEEEDEEDEAADEEEKGGDDAASSPV
RSLKDDFGFSENKSRFNDDDDEEEELEVSFNPPKPKKPVPAKKETTSSFSSKTAFSEKSN
DSDGSKSDSDDDNGPVFNTYSSSSAFDKLSQSKKGTKKPSNPTPKPKKTPAAKAKKPDKS
IWDSDSDTGSKKSSATPKGKGRGRKRKGSGSEDEYSPVKKTSKPPGRKPPSDDDEDNSNG
LSAVSRLTQEQPGRARKEIKYFNIMDDDDDEMFD
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacggcgctgcggggagcggggatctgtcctggatggaggctgccaacggcaga
ggagatgtgggaaagatggaagggaccaagaaggagaaggcaggctctaagctgtcagtg
gagcgagtgtaccagaagaagactcctctcgagcacatcctgcttcgtcctgacacctac
gtgggctcagtggaacctgtcactcagccaatgtgggtctttgatgaagacgtggggatg
aatcagagggagattacttatgttcctggactctacaagatctttgatgaaattcttgtt
aatgcagcagacaacaaacaaagggacaagaacatgtcagccatcaagatcaccatcgac
cctgagtccaacaccatcaccatctggaacaacgggaagggcattccggtggtggagcac
aaagacgagaagatgtacgttccagcgctcatcttcggacatctgctcacctccagcaac
tatgatgacgacgagaagaaggtcacaggtggaaggaacggctacggcgccaaactctgc
aacatcttcagcaccaagttcaccgttgaaacagcctgcaaagagtacagacgcagtttt
aagcagacgtggcagaacaacatgacgaagaccacggagcagaagatcagggctttcgat
ggggacgacttcacctgcgtgactttccagcccgatctagccaagttcaagatggagaag
ctggacaaggacactgtggccctgatgacccgcagagcgtatgacgtagctggctccgtc
aagggggtgaaggtcaccctgaacgggaagaaattacctgtccacggcttccggagttac
gtggacctgtacgtgaaagacaaagtggatgagacgggcgtgcctctgaaggtggtgaac
gaaacggtgaacgatcggtgggaggtgtgcctcaccatgagcgagaagggcttccagcag
atcagctttgtcaacagcatcgccaccacaaaggggggcagacacatcgactatgtggtg
gaccagattgtgtccaaactcattgaagtagtgaagaagaagaacaaagcaggagtggtg
gtgaaacccttccaggtgaagaaccacatttgggtttttgtcaacgcactgatcgagaat
ccaacctttgactcccagaccaaggagaacatgactctacaaaccaaaagctttggttcc
aagtgtgtcatgtcggagaagttcatcagagctgccaccaactgtgggattgtggagagc
atcctgaactgggtgaagttcaaagctcagactcagctgaacaaaaagtgctcgtctgtg
aagcacagcaagatcaaaggcatcccgaagctggacgacgccaacgacgccgggggtaaa
cactcgtccgagtgcacactcatcctcaccgagggagactcggccaagtccctggccgtc
tccggtctgggagtcatcggtcgggatcgttacggagttttcccgctcagagggaagatc
ctgaacgtccgggaggcaacacacaagcagatcatggagaacgcagagatcaacaacatc
atcaagatcgtgggtctgcagtacaagaagagctacgacgaccccgagtctctgaggagc
ctacgatacggaaagatcatgatcatgacggatcaggatcaggacggctcccatataaag
ggtctcctcatcaatttcttccatcacaactggccctcactgttgaaacacaccttcctg
gagcagttcatcactcccatcgttaaagcgactaagaacaaacaggagctctccttctac
agtcttcctgagtttgaggagtggaagaagcagacggaaagctataaaacctggcacatc
aagtactacaaaggtttgggtacaagcaccagcaaagaggccaaggagtactttgctgac
atggagagacaccggatcacattcagataccagggggccgaggacgacgccgccatcacg
ctggcctttagcaaaaagaagactgacgacaggaaggagtggctgacgaacttcatggag
gaccgacggcagaggaggatgcacggcctgccggagaaatacctgtatggaacgcagacc
aagcacctgtcctacaacgacttcatcaataaggagctcattctcttctccaactctgac
aacgagaggtccattccttctctggtggacggtttaaagccgggccagaggaaggtgttg
ttcacctgcttgaagaggaacgataagagggaggtgaaggtggcccagctggctggttct
gtggcagagatgtctgcttaccatcatggagagcaagctctcatgatgaccatcgtgaac
ttggcgcagaacttcgtgggcagcaacaacatcaacatcctgcagcctctgggtcagttt
ggtactcgcatcaacgggggcaaagacgccgccagtcctcgttacatcttcaccatgctc
agccccctcgccaagctgctgttcccggctgtggactccaacctgctcaagttcctgtac
gacgacaaccagaaggtggagcctgagtggtacattcccatcatccccatggtgctggtg
aacggcgcagagggcatcgggacggggtgggcctgcaaaatcccaaactacgacccccga
gagatcgttaataacatcaacaggatgctcaaccaccaggaccccctcccgatgcttccc
agttacaagaacttcaaaggagtgatccatgaacttggccagaaccagttcctggtcagt
ggggaagtgtcggttctggacaaaaacacagtcgagatcacagaacttcctgtgcggacg
tggacgcaggcctacaaggagtccgtcctggagcctatgctgcaaggaaccgacaagacc
cccgccctgatcagcgactacaaggagtaccacacggactccaccgtcaagttcgtggtg
cgcatgtcagaggagaagctggctcaggcggaggccgtcgggctccacaaagtcttcaag
ctgcagtccagcctcacctgcaactccatggtgctgttcgaccacatgggctgcttaaag
aggtacgactcggtccaggacatcctgaaggagttctttgagctgcgcctgcactactgc
aagctcaggaaggactggttacagggcagcctaggggccgaggcggccaaactgtccaac
caggctcgctttgtgctcgagaagatcgaaggaaagatttcaatcgagaacaaatccaag
cgagaactcatccgcatgctggtgcagaaaggctacgagtcggatcctgttgccgcctgg
tcaaaggctcaggaaaagtctcaggaggaagcagagactgacgggaacctgagcgacagc
tcgatggactcgggctcttcgtctggaccgaacttcaattatatcctcaacatgcctctg
tggtgcctgaccaaggagaaggtggaggagctgctgaagcagagggatttgaagagaggt
gagctggctgatctgcagaagaagtctcctgaggatctgtggaaggaagatttggcgatc
ttcattgaggagctggataacgtagaagcccaggagagagaggagcagagtgcaggccgg
gccatcaagctggtgaagggaaaagtcggcaaacctaaagccaagaagatgaacctggag
gagaccatgccttcaccgtttggacggcgggtggaccctccctctcagccggtcaaatcc
gatgcagccaagaaactgtccaaaaagaagaagcctgaactggaccaagtgaagctggag
tttgatgatgacgagggaggagccgccgccgccgccgagaactctgtgagcaaacccaaa
actcctcgagtcaagaaggagaagaaggagccaggagcgcccagagtgaggaagcagccc
acacccaaaggtactcctgcaaagaaggtgaagaagagaaacccctggtctgatgacgag
tccaagtccgagagcgacctggaggagaacgagcccatcattcccagagagaccaagtct
cagagagcgtcagcttccaaaccaaaatacacatttgacttctctgaggaagaggatgag
gaggacgaggcggcagacgaagaggagaagggaggcgacgatgcagcctcgtctccagtg
aggtcactgaaagatgactttggattctctgagaacaagagtcgcttcaacgacgatgac
gacgaggaagaggagctggaagtctccttcaatccacccaagccgaagaaaccggtgcca
gctaaaaaggagacgaccagcagcttctcgtccaagacggccttctccgagaagagcaac
gacagcgacggctccaagtccgacagcgacgacgacaacggtccagtcttcaacacctac
tccagcagctccgcctttgacaaactgtcccagtcaaagaaagggaccaagaaaccctcc
aacccaactcccaaacccaagaaaacaccagcagcaaaagcaaagaaaccggataaatcc
atctgggactctgattccgacaccggctccaagaagtcgtcagcaacccccaaaggtaaa
ggacggggaaggaagaggaagggatctggatctgaagatgagtacagtccagtgaagaag
acttcaaaacctccgggcagaaaacctccgtctgacgacgacgaagacaacagcaacggc
ctgagcgccgtcagcaggctcacccaggagcagccgggccgcgctaggaaggaaataaag
tacttcaacattatggacgacgacgacgacgagatgttcgattaa
DBGET
integrated database retrieval system