Oryzias melastigma (Indian medaka): 112160767 Help Entry 112160767         CDS       T07439                                  Symbol pcdh17 Name (RefSeq) protocadherin-17 isoform X1   KO K16499   protocadherin delta 2 Organism oml  Oryzias melastigma (Indian medaka) Brite KEGG Orthology (KO) [BR:oml00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:oml04515]     112160767 (pcdh17) Cell adhesion molecules [BR:oml04515]  Cadherins   Protocadherins    112160767 (pcdh17) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_2 Cadherin_CELSR2_9th PepSY Cadherin_C_2 Motif Other DBs NCBI-GeneID:  112160767 NCBI-ProteinID:  XP_024151317 Ensembl:  ENSOMEG00000015923 LinkDB All DBs Position LG3:complement(13346416..13406061) Genome browser AA seq 1141 aa AA seqDB search MHLSIFFFLLLWAQAQTLKNLNYSVPEEQGPGTVIGNIAKDARLGLEQIGQGGQGKKANF RVLENSAPHLIDVDPQSGLLYTKQRIDRETLCKRNPKCQLSMEVFANDKEICMIKIDIQD INDNSPVFPSDQIDIDISENAVPGTRFPLTSAHDPDAGENGLKTYQITRDDYNLFSLEVK SRGDGTKFPELVIQRPLDREERSHHTLILSATDGGEYPRSGTMQINVKVIDSNDNSPVFD PPSYVVEIPENSTPGKVLIDLNATDPDEGNNGQIVYSFSGYAPERIRELFSIDSRTGVIK IQGEIDYEESPVIEIDVQAKDLGPNPIPGHCKVTVKVLDRNDNWPSIGFVSVRQGAISEA APPGTVIALVRVTDKDSGRNGQLQCRVLGNVPFKLEENYDNFYTVVTERPLDREMQDEYN VTIVAKDNGIPPLNSTKSFTVKILDENDNVPRFTKSVYILQISENNIPGEYLGSVLAHDP DLGQNGTVYYSIVNSNVSGGDVNTYVNVNAANGAIYAVRSFNYEQIKYFDFKVLAKDAGS PHLESNATVRISVQDVNDNIPVIVLPLLQNDTAEIHVPRNVGVGYIVTTVRAVDNDYGES GRLTYEISDGNEEHLFEIDPVTGEVRTAHSFWEDVSPIVELIIRVSDHGKPTLTAAARLI IKASNGRPPDGLPHIKDNQNWDTSLPLIVTLSIISLMLLAAMVTIAIKCKRENKEIRTYN CRIAEYSHPQLGKGKKKKINKNDIMLVQSEVEERDAMNVMNVVSSPSLATSPMYFDYQTR LPLSSPRSEVMYLKPTTNNLSVPQGHVGCHTSFTGPVTSTTDTPTNRMSIIQTDNFPTEP NYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKLKAV GVKPPPLEQDEDCVNCTEECRVLGHSDRCWMPQFPAGGNQAEGIDYRNNMFVPAGMETVP ETETYEAVNPNGKKTFCTFGKDRRDHTILVANVKPYLKAKRALSPLLQEVPSASTSPSKG CSTMSPCSSVKSPADGAEGKPPPASCSGHYGPPDGQYLSPTKQTRDQLIYPSLPPSDPVA KVLAEARSRISQEAAAEMECVLEQAEPNVSRDGMDADQVVRDIDKLLQDCRGNEATGTLR K NT seq 3426 nt NT seq  +upstreamnt  +downstreamnt atgcatctttccattttcttttttctcctcttgtgggctcaagcccagacactaaaaaac ttgaattactcggtcccggaggaacagggaccagggacagtgattgggaatattgccaaa gatgccaggcttggactggaacagattgggcagggaggacagggtaagaaagccaacttc agggtgctggagaactctgcacctcatctcattgacgtggacccccaaagtggattgttg tacacaaagcagcgcattgacagggaaacgttgtgtaaaagaaaccctaagtgccagctc tccatggaagtgtttgccaatgataaagagatatgtatgataaaaatagacattcaggac atcaatgacaactcacctgttttcccctcggatcagattgatattgacatttctgaaaat gcagtgccaggaacacggtttcccctgaccagcgcacatgacccagatgctggggaaaat ggcctaaaaacctatcaaattacacgtgatgactacaacctcttttccttagaggtaaaa tctagaggggatgggacaaaatttccagaattagtcattcagcgaccactggaccgagaa gaacgaagtcatcacacccttattttgtcggctactgacggtggggaatatcctcggtct ggcaccatgcagataaatgttaaagttattgactccaatgacaacagcccggtgtttgat ccgccctcatatgttgtggaaattcctgaaaattcaactcctggtaaagtcttgattgat ttaaatgctactgatcctgatgagggaaacaacggtcaaatagtctactcttttagtggt tatgcccccgagagaatcagagaactcttttccattgattccagaacaggagtcataaaa attcagggtgaaattgactacgaagagagcccggttattgagattgacgttcaggcaaag gatcttggtcccaatccaatcccaggccattgcaaagtcacagttaaagtgcttgacagg aatgataattggccgtccataggctttgtgtctgtgcgacagggagccatcagtgaagct gcacccccaggcacagttattgctctggttcgtgtcacagacaaggactcaggcaggaat ggccagcttcagtgtagagtgctgggtaatgtcccatttaaacttgaggagaactatgat aacttctacactgtggtgacagaaaggcccctggacagggaaatgcaggatgagtacaat gtcacaattgtagccaaggataatggcattcctccactaaattctacaaaatctttcacc gtcaagattctggatgaaaatgacaatgttccccgcttcaccaaatcagtatacattctt caaatctctgaaaacaacattcctggagagtatttaggttcggttctggcacatgaccca gaccttggccagaatgggacagtgtactacagtattgttaactccaacgtaagtggcggt gacgtcaacacctatgtcaacgtcaatgcagcaaatggagccatttatgctgtaagatct tttaactacgagcaaattaagtattttgattttaaagttctcgctaaagatgcaggatct ccacaccttgagagtaatgctactgtccgcatcagcgttcaagatgtcaacgacaacatt cccgtcatagttttgccactccttcaaaacgacacagctgaaatccatgtcccgcgaaat gttggtgttggctacattgttaccaccgtgagagcagtggataatgattatggtgagagt gggaggctcacctatgaaatttcagatggcaatgaggagcacctctttgagatcgaccca gttactggggaggtgcgaacagcccattccttctgggaggacgtaagccctattgtggag ctaataatccgagtgtcggaccacggcaagccaacactaactgctgcagctagactcatt attaaggcttccaacggacgacctcctgatggactgccccacatcaaagacaatcagaat tgggacacctctctgcctcttattgtaactctaagcatcatatctctcatgcttctggct gccatggtgaccatagcaatcaagtgcaaacgggaaaacaaggaaatacgtacttataac tgtcgcattgctgagtactcgcatcctcagctggggaaaggcaagaagaagaagattaac aagaacgacatcatgctggtgcagagcgaggtggaggagcgggatgccatgaatgtgatg aatgtggtaagcagcccttccttggccacctctcccatgtactttgactaccagacacgc ctgccactcagctcaccaaggtcagaggtcatgtacctcaagcccactaccaataacctc agcgtgccccaaggccacgtgggatgccacaccagcttcacaggcccagtcaccagcact acagacacacctactaaccgcatgtccatcatacagacggacaatttccccaccgagcct aattacatgggcagcagacagcagtttgttcaaagtagttccacattcaaagacccggag cgagcgagtcttagagacagcggtcatggggacagcgaccaggctgacagtgaccaggac accaacaaaggttcctgctgtgatatgtctgcgaaggaagccctcaagttgaaggctgtg ggtgtgaaaccaccacctctggagcaagatgaggattgtgtgaattgcacagaagagtgc agagtactgggtcattctgaccgctgctggatgccacagttccctgctggtggaaaccag gcggagggcattgactaccgcaacaatatgtttgtgcccgcagggatggagactgtgccc gagactgagacctatgaggctgtcaatcccaacggcaagaaaacattctgcacttttggc aaagacagacgtgaccacaccatccttgttgcaaatgtcaagccctacctgaaagcaaaa cgtgccctcagccctcttctccaagaagtcccctctgcatctaccagtcccagcaagggc tgctcgacaatgtcgccttgttcttcagtcaaaagcccagcagatggggctgagggaaaa ccgccccctgcctcatgctcgggccactatgggcctcccgatggtcagtacctctctccg actaaacaaacaagagaccagctgatttacccatccctaccgccctccgacccagtggca aaggtgctggcggaggcccgctcacgaatcagtcaggaggcagcagctgagatggagtgc gtcctagagcaggcggagccaaacgtgagccgcgatggtatggacgctgaccaggtggtc agggacatcgacaaactattgcaggactgtagaggaaatgaggccaccggcacgctcagg aagtga

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