Oryzias melastigma (Indian medaka): 112160772
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Entry
112160772 CDS
T07439
Symbol
usp8
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04137
Mitophagy - animal
oml04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112160772 (usp8)
04137 Mitophagy - animal
112160772 (usp8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oml01002
]
112160772 (usp8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112160772 (usp8)
04121 Ubiquitin system [BR:
oml04121
]
112160772 (usp8)
Enzymes [BR:
oml01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112160772 (usp8)
Peptidases and inhibitors [BR:
oml01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112160772 (usp8)
Membrane trafficking [BR:
oml04131
]
Endosome - Lysosome transport
Others
Others
112160772 (usp8)
Ubiquitin system [BR:
oml04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112160772 (usp8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Rhodanese
Motif
Other DBs
NCBI-GeneID:
112160772
NCBI-ProteinID:
XP_024151328
Ensembl:
ENSOMEG00000010929
LinkDB
All DBs
Position
LG3:complement(11168046..11180485)
Genome browser
AA seq
1080 aa
AA seq
DB search
MPAVSTEVKELYLSSCLGDLNKKAEIKPDKTSTRSYVQSACKLFKAAEECRLDRDEEKAY
VFYMKYLTVYDIIKKRPDFKQQPDYYITLLGQNSFKKAIEEAEKLSESLKLRYEEVEVRK
KLEEKEQLEEKKKKEEVEKKKDVGSPKASAANKKDSKKVRGDQNELKSVITKAVQPAGGV
TAEKLFQMMKDQTITMVVMDARSLKDYEESHIQVPAQTCISVPEEAISPGITVNQIEAKL
PSLSKDHWMRRGFVDYIVLLDWFSSVSDLKLGTTLQSLKDALFKWDSITILRSEPLVLEG
GYENWLLFYPMYTTNAKVRPPRETTVNTLPQLNFSYPSLEEPKPPVIHPEPVVQPDSQKP
PAPAVVNGVAPAEPPTSKTSVIADKLPDTHDSPVISTGLDLNKQNPAPNQSPVTSKSFPQ
FDRTKKPLRDDPKAKENGSTKDSTQNGPVVPDRSVKPPLIPSSSLSKEEQSQIHLEAVAV
MEKAKQEQEKRMQERRLEEEKREKEQNERELKERLEKEESEKKSKQEEEKRHLERKRLER
QKAEEEEDKENKTWDERERRGKESNADTPSKSMSLDSPVPNHLVSEIKREPLTRARSEEM
GRTVPGLPDGWMKFLDTVTGTYRYYHSPTNRVHLYPPEVTVPQTPPSTPPTVKQKPPQPA
EPDTSHEREQEQSKLKRSYSSPDISQELREEAQKKATAPPTPVVIPTINRDTKPVTSKVY
SKVEIARPSAAKIRSLNPTFGGLGASLTGLRNLGNTCYMNSILQCLCNTPAMAEYFNNNY
YLEDINRSNILGHKGEVAEEFGVIMKALWAGLYKFISPRDFKITIGKINDQFAGYDQQDS
QELLLFLMDGLHEDLNKADNRKRYKEEENDHLDDQTAADLAWSKHKLLNESIIVALFQGQ
FKSTVQCSTCHRKSRTFETFMYLSLPLASTSKCSLQDCLRLFSKEEKLTDNNKVFCRHCK
AHRDSTKKLEIWKVPPILLVHLKRFSYEGRWKQKLQTSVDFPLDNLDLAQYVIGPKQTLK
RYNLYGVSNHYGGLDGGHYTAYCKNAMKQRWYKFDDHEVSDISTSSVKSSAAYILFYSTL
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagtgtccacagaggtgaaggagctgtatttatcctcatgtctgggcgacctc
aacaagaaagcggaaatcaagcccgacaagaccagcaccaggagttatgttcagagtgcc
tgcaaactatttaaggcggcagaggaatgccgtttggacagagatgaggagaaagcttat
gtcttttacatgaaatatctaacagtatatgacatcattaagaaaagaccagacttcaag
cagcagccggactattatattactctgctcggacaaaacagcttcaagaaagccatagag
gaagcagaaaaactctctgaaagccttaaacttaggtatgaagaagttgaggttcgaaaa
aagcttgaggagaaggagcaattagaggaaaagaagaaaaaagaggaggttgagaagaaa
aaagatgtgggctctccaaaagcatcagctgcaaacaagaaggacagtaaaaaggtgaga
ggtgatcagaacgagctgaagagtgtgatcacaaaagccgtacaaccagctggtggtgtt
acggccgagaagctttttcaaatgatgaaggaccaaacgatcaccatggttgtcatggac
gcccgaagcctcaaggactacgaagaatctcacattcaagtccctgctcagacatgcatc
agtgtgcctgaggaggccatcagtccaggaatcactgtgaatcagattgaggcaaagcta
ccaagcttgtccaaggatcactggatgaggcgtggctttgtggactacatcgtcctgctg
gactggttcagttccgtctccgacctcaagctgggcaccactttgcagagcctcaaggat
gccctctttaagtgggacagcatcaccattctgcgaagtgagcctctcgtgctagagggg
ggctatgagaactggctgttgttttatcccatgtacacgaccaatgccaaagttcgaccc
cccagagagaccacggtcaatactctccctcagttgaactttagctacccatccttagag
gagccaaagcctcccgtgattcatcctgagcctgtggttcaacccgactctcagaagccg
ccagctccagcggtggtcaatggggttgcacctgctgagcctcccacatccaaaacttct
gttattgctgacaaattgccagacacacatgactccccagtaataagtactggtttggat
ctaaataagcagaatcctgcacccaaccagtcccctgtaacgtccaaatcattccctcag
tttgaccgaaccaagaaacccttgcgagatgatcccaaggccaaggagaatgggtccacg
aaagactccacccagaacgggcctgttgtccctgaccgttcagtgaagcctcccctcatt
cccagctcgtctctgtccaaagaggaacaaagtcagatacacctggaagctgtggcagtg
atggagaaggccaagcaggagcaggagaaacgcatgcaggagcgccgcctagaagaggag
aagcgagagaaagagcaaaacgaaagggagttaaaggagaggctggaaaaagaggaaagt
gagaagaagagcaagcaagaggaggagaaaaggcatctggagaggaagagacttgaaaga
caaaaagcagaagaagaggaagacaaagagaacaagacgtgggatgagagggagaggagg
ggaaaggagtccaatgctgacacgccctccaaaagcatgtctctggattcccctgttcct
aaccacctcgttagtgagattaagagggaacctttgaccagagccagaagtgaggagatg
ggcaggactgttccaggcctacctgacggttggatgaagttcctcgacacagtgactggg
acatacagatactaccattccccgaccaatcgtgtccacctgtacccccctgaggtcacg
gttcctcaaacaccaccttccactccacccacggtcaaacagaagccaccacaaccagct
gagccagacaccagccacgagagggaacaggaacagtccaaactgaagcgctcctattcc
tccccagacattagccaggagctgagagaggaggctcagaaaaaggccaccgccccaccc
actcccgttgtcatacccaccatcaacagagacaccaaaccggtcacttcaaaagtatac
tctaaagtagagatcgcacggccatcagcagccaaaattcgcagcctgaatcctacgttt
ggaggtttgggcgcatcactgaccggcctccgtaaccttggcaacacctgctacatgaac
tccatcttgcagtgtctttgcaacacccccgccatggccgagtacttcaacaacaattac
taccttgaggatattaacagatccaacattcttggccataaaggggaggttgcagaggag
tttggtgtgattatgaaagccttgtgggctggcttgtacaaattcatcagtccacgtgac
ttcaagatcaccataggcaagatcaatgaccagtttgccggatatgaccaacaagactcc
caagagctgctgctgttcctgatggatggtcttcatgaagacctaaacaaggcggacaat
aggaaacgatacaaagaggaggaaaatgaccacctggatgaccagaccgcagccgacctg
gcctggagcaaacacaaactcctcaacgagtccatcatcgtagccctgttccagggccag
ttcaagtctacggtgcagtgttccacctgccatcgcaagtcacgcacgtttgagaccttc
atgtacctgtcgctgcccctggcttccaccagcaagtgctccctgcaggactgtctgagg
ttgttctccaaagaggaaaaactgactgacaacaacaaagtgttctgcagacactgcaaa
gcccacagagattcaaccaagaaactggagatctggaaggttcctcccatcctcctggta
cacttaaaacggttttcttatgaaggaaggtggaagcagaagctgcagacttcagtggac
ttccctctagataatctggatctagcccagtatgttattggacccaaacaaaccctcaaa
agatacaatctttatggagtttcgaatcactatgggggcttggacggcggacattacaca
gcctactgtaagaacgccatgaaacagcgctggtacaagttcgatgaccacgaggtgtcg
gacatctccacctcctctgtgaagtcctctgcggcttacatcctcttttactccaccttg
tga
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integrated database retrieval system
