Oryzias melastigma (Indian medaka): 112160811
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Entry
112160811 CDS
T07439
Name
(RefSeq) leucine-rich repeat-containing protein 49
KO
K16606
leucine-rich repeat-containing protein 49
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oml03037
]
112160811
04812 Cytoskeleton proteins [BR:
oml04812
]
112160811
Cilium and associated proteins [BR:
oml03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
112160811
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
112160811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
LRR_NXF1-5
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
112160811
NCBI-ProteinID:
XP_024151398
Ensembl:
ENSOMEG00000017043
LinkDB
All DBs
Position
LG3:complement(28606076..28640334)
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AA seq
791 aa
AA seq
DB search
METEKTTCVSEKDADSLSDTTDVPILAGNSCKLHLTNVKSRAPERAQTMTEIFHKTNMNI
EKKKKPTFSAGSRLHTWSRSRAASADRAGLSEQSAALLAGAGLLPHAVNKARRKSRRPTC
SEGATDCQLVVKNHKPSGNDNNTAAAFSSTQLPVVPSCHQLDLDRRFLQKFPQLDSTNEV
QFLNLQRNLITRIQHLSQLQHLILLNLYDNYISEMSGIEVLRSLRVLLLGRNRIKKICCL
ENLSRLNILDLHDNQICRIENISHLDELQVLNLSGNCISRLENLQGLDSLTELNLRHNCI
CAVTELDRLPCLQRLFLSCNNIIRFDQLACLGRSHSLSELTLDGNPVALETWYKQAVLRC
VLHLRQLDMKRVTDEDRRMAGVQARKEEEKKEKSHKQTIHKEKRRLAIRNAAQQWEGVRA
CMELAPTTGTKEDVSPENSPSHSPAQTNGVAQDPSPEEPRRVSPGSGPERPPGGTEIRLR
TNSRPNSPRDPKFVETGSGSVQSLSLSESHLAELDGDTLRLFGLGALEALERGWGVQTAG
AVTVITFRYINFDAIVPSLPRIRVKFPNLSHLIFLETNISRLPQLAALAQVRRLDQLTVH
PEGNPVVSLTLWRSFVIYRLYHFNLQRINGQEVTMNDVISAERVFGTLGHVAATETPRCR
LLLLLEESRKRQLQFLLEGRGRRAGLSPDDLRENGKLLGESLSRALFNYPSRDCNTESPE
EGSVESSERASMIDQYLQDLVQRASDTNLKGEALHKLWPSMFAEMVGDCVLEMRDRAAFR
QTSLAKLSETK
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaaaagacgacgtgtgtctctgaaaaagacgccgacagtttgagtgatacg
acggacgttcctattctcgcgggtaacagctgcaagttacacctcacaaatgtcaagtca
cgtgcaccagagagagcacagacaatgactgaaatttttcacaaaacaaacatgaacatt
gagaaaaagaagaaaccaacattctctgcaggaagcaggttgcacacatggagccggagc
agagctgccagtgcagacagagcaggtttgtctgaacagagtgcagcactgttagcaggt
gctggcctccttccacatgcagtaaataaagcaagaaggaaatcgaggagaccaacctgc
agtgaaggggccactgactgccaacttgttgtaaaaaatcacaagccatcgggaaatgat
aacaacactgcagctgctttctcttccacccaattgcctgttgttccaagttgtcaccaa
cttgacttagacaggcgctttctgcaaaaattccctcaactggattccacgaatgaagtc
cagtttctcaacctccagcgtaacttgatcacaagaattcagcatttatcacaactgcag
catctcattttattgaacctgtatgacaattacatctctgagatgtctggcattgaagtt
cttcgatctctcagagtcctcctgctggggaggaacagaatcaagaaaatttgttgcctg
gagaacttgtccagactaaacatcctggatttgcacgacaatcagatctgcaggatagaa
aacatctctcacctggatgaactgcaggtactgaacctctcaggaaactgcatctcaagg
ttggaaaatctccagggcctcgactctctgactgaacttaacctgaggcacaactgcatc
tgtgctgtgactgagctggaccgcctgccctgcttgcagcgtctctttctcagctgcaac
aacatcatcagatttgatcagctagcctgccttggaaggtctcactccctttctgagctc
accctggatgggaatcctgtagccctggagacatggtacaagcaggctgtcctgcgctgt
gtgcttcatctgagacagctggacatgaagcgcgtcacagacgaggatcggcgcatggca
ggtgtacaagctcggaaagaggaggaaaaaaaggagaagagccacaagcagactattcat
aaggagaagcggcgccttgctattcgaaatgcagcacagcagtgggagggtgtcagggcc
tgcatggagctggcacccaccaccggcacaaaggaggatgtcagtccggagaacagcccc
agccacagcccggcacaaaccaacggagttgcacaagatccttccccggaagaaccaaga
cgggtgagtccaggctcaggacctgagcgaccaccaggtggcacagagatccgactccgt
accaacagccgcccaaacagccctcgggatccaaagtttgtggagacggggagcggcagc
gtccagagcctgtccttgtctgaaagtcacctggcagagctggatggagacaccctgcgt
ttattcggactgggagcgctggaggccctggagaggggctggggggttcagacagcgggg
gccgtcactgttataacctttcgctacatcaactttgacgccattgtaccttcactgccg
agaataagggtcaagttcccaaacctatcacatctgatcttcctggagacaaacatcagc
cgcctgcctcagctggcggccttggctcaggtgaggcgtctggatcagctgaccgtccac
cctgagggcaacccggtggtcagtctgactctgtggcgctcatttgtcatctaccgcctg
taccacttcaacctccaaaggatcaatggccaggaggtgaccatgaatgatgtgatcagc
gcagagcgtgtgtttggaacactcggtcatgtggccgcaacggaaactccgcgttgtcgt
ctccttctcctgctggaggagtcaaggaagcggcagctgcagttcttgctggaggggcgt
ggccggcgggcggggctgagtccggacgacctgcgagaaaatgggaaactcctgggtgaa
agcctgagcagagcgctcttcaactacccaagcagggactgtaacactgagagcccagag
gagggctctgtggagtcgtccgagcgggcgtccatgatcgatcagtacctccaggacttg
gtccaaagagcatcagacacgaacctgaagggcgaggctttacataaactctggccttcc
atgtttgcagagatggtcggggactgtgtgttggagatgagggaccgagcagccttccgc
caaaccagcctagcaaagctctccgaaaccaagtga
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