Oryzias melastigma (Indian medaka): 112160813
Help
Entry
112160813 CDS
T07439
Symbol
dna2
Name
(RefSeq) LOW QUALITY PROTEIN: DNA replication ATP-dependent helicase/nuclease DNA2
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112160813 (dna2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oml03032
]
112160813 (dna2)
Enzymes [BR:
oml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
112160813 (dna2)
DNA replication proteins [BR:
oml03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
112160813 (dna2)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
112160813 (dna2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dna2
AAA_12
AAA_11
Dna2_Rift
AAA_30
AAA_19
Viral_helicase1
UvrD-helicase
nSTAND3
SRP54
AAA_25
DEAD
bpMoxR
Helicase_RecD
MobB
ResIII
Capsid-VNN
AAA_22
CbiA
Motif
Other DBs
NCBI-GeneID:
112160813
NCBI-ProteinID:
XP_024151401
LinkDB
All DBs
Position
LG3:21450295..21465612
Genome browser
AA seq
1382 aa
AA seq
DB search
MKKTKMKNRIPAGKPGGQQNISAFFSSKDQKVSPSPLKPYNSVCAFGKAGPQNPHHKSSL
LRRRSPSRRNMPGDLENVLPSSPDLLLLVPETPNSQIRFTCSTSPKEENQDPSREVANLG
QLSPICRSPSSKSQRIKRLSNEKRGSTKLDGRLSGSLKRLFNPGEDSYMAKKARMVNDSM
QKSAVQVSGSTQEELQPFSNFLKVLSDDKTNKSTLQISSDRHMKDQRKHQEEQGRKDSSF
TVITEMKAAEGQTKKTFHCSVQNACIPFSSGKESSSKIPVKEVEPKEKYTTTTQEMDEDK
NKKSTHQEHAGAADTASASTHPPEEDFDDSWFMEQMDQMDCVEDKPKKPRKVPDHVILSG
GPNNRYWVVDVEDGPGYKKLIITSSRTQHPTETCLLKDGWETTPVRRGDVVHLEGRSDAG
TWLVERDQGFLVLQPDSLISGTSISNSIRCMRRAVLGEMFKSFDGGSKQMLNGTMVHEVF
QRAAKAKDFSLEKLSKLADEALHSPRYLGDMYTLGVSQEEMKQELLDYLPSLENWAGEYL
SSSKPKPIGLKILNSRQAPGGCQDSNAVVTVTELADIEENVWSPRFGLKGKIDVTARVQI
QRPRSSRSPEEKTFPLELKTGKESNSIEHRSQVILYTLMSMERYNPEAGLLLYLKTGSMY
PVAPSHMDRRELLKLRNTLVHHLHSSVEKGADRSNLQRLPDILSNRQTCQYCPQKLNCAL
YERVLDPSSADLRDDVVRDFLQQESGHLAPQHLNYFSHWLLLCLLEAVTMETKNTRKHIW
LQSIESSEKNGSCMGNLQLQDAVTAQAEDVFLHRFQRTRSAPLQSATNCGLTSGDRIVVS
DQDGRLVGLATGYLCEVDKTSVSCRLSRXDQVPLIPTPEDVLFRLDADEGVVGLSTHLTN
LSRLMENCQDSERLRKLIVDLHPPEFIFNLSSVLPRDAKDTVADILKGLNKPQKQAMKKV
LLSKDYTLIVGMPGTGKTTTICTLVRILIACGFSVLLTSYTHSAVDNILLKLKRFRVGFL
RLGQGQKVHPDILPYTEENVRKKGVLTLLELEELYNKELVVATTCMGIKHPIFTRRRFDF
CIVDEASQISQPICLGPLFYVHRFVLVGDHQQLPPIVQNHEARSLGMDESLFKRLEVHSE
AVVQLNVQYRMNRQIMSLSNSLMYDGRLECGSERTATALLTLPLLASVQSELRSHSETHP
QHDLSWVQSALLPANPVCFLDCSSVPALESVEQGGVSNHTEAALIHMLLSLLIKAGCRPS
DVGVIAPYRQQLKTIWALLQSPSFSGVEVNTVDKYQGRDKSLIVLSFVRSNTEEGHLGEL
LKDWRRLNVAITRAKHKLLMVGSAVTLRRFPPVEKLLNHLQQENMVIQLPPAAHKTLSSM
VL
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaccaaaatgaagaacaggattcctgcagggaaacctggaggacaacaaaac
atttcagcatttttttcttcaaaagaccagaaggtctctccgtctcccttaaaaccatac
aactctgtctgtgcattcgggaaggccgggccccaaaacccacatcataaaagttccctg
ctgagacgtcgttctccatcaaggagaaacatgcctggagatcttgaaaatgttcttcct
tcctctccagaccttctgcttttggttcctgaaacccccaatagtcagatcaggtttaca
tgctccacttcccccaaagaggaaaaccaggatcccagcagagaggtggcaaacctcggc
cagctgtctcccatttgtcgcagccccagctctaaaagtcagagaataaagaggttgagt
aatgaaaagagaggatcaacaaagttagatgggagattgtctggctctttgaagagactc
ttcaatcctggtgaggactcctacatggcaaagaaggcaagaatggtgaacgactcaatg
caaaagtctgcagtccaggtctcaggtagcacccaggaggagttgcagccttttagtaac
tttttgaaggtgctctctgatgataaaaccaacaaatccactttgcagattagttctgat
cgtcacatgaaggaccagagaaaacatcaggaggagcagggcaggaaagactctagtttt
actgtgataacagaaatgaaagcagcagagggtcaaaccaagaaaacctttcactgtagt
gtgcagaatgcatgcattcctttctctagtgggaaggaatcttcgagcaaaatcccagtg
aaggaggttgagccaaaagaaaaatacaccacaacaacacaggagatggatgaagataaa
aacaagaagtcaacacatcaggaacacgctggagctgcagatacagcatcagcatctacc
catcctccagaggaggactttgatgacagctggtttatggaacagatggatcaaatggac
tgtgtggaggataaacctaaaaaacctcgtaaggtaccagaccacgtcatcctttccgga
ggtccaaacaatcgctactgggttgtggatgtcgaggacggtccaggctacaaaaagctc
atcatcacatcttccaggacgcagcatccaacagagacgtgtttgctaaaagatggatgg
gagacgacgcctgtgaggcgtggcgatgtggtgcatctggagggtcgttcggacgctggg
acctggttagtggagcgggatcaaggcttcctggttttgcagcctgacagtcttatttca
ggaaccagcatttccaactccatccgttgcatgaggcgcgcagttctgggagaaatgttc
aagagttttgatggtggctccaagcagatgctgaatgggaccatggtccatgaagtcttc
cagagagcagccaaagccaaggatttttctttggagaaactatcaaagttggcagatgag
gctctgcacagtcctcggtacttgggagacatgtatactctgggtgtgagtcaggaggag
atgaagcaggaactgctcgattatctgccctcactggaaaactgggccggcgaatacctc
agctcctcaaagccaaagcccatcggtctcaaaattctaaactcccgtcaagctccaggt
gggtgccaggactcaaacgccgttgtcacggtgacagagttggcagatatcgaggagaac
gtctggtctccgaggtttggcctcaaagggaaaattgacgtaacggctcgggttcaaatc
caaagaccacgaagcagcagaagtccggaagaaaagacgttccccctggagttaaaaact
ggaaaggagtccaactccattgagcatcgcagtcaggtgattttgtacacgctaatgagc
atggagagatacaaccctgaagctggtctcctgctttacctgaagaccggcagcatgtat
cctgtagcacccagccacatggaccgcagagagcttctgaagctgagaaacactttggtt
catcaccttcacagcagtgtggagaaaggggcagaccggagcaacctccaaagacttcct
gacatcctgtcgaacagacagacctgccagtactgcccccagaagctcaactgtgctcta
tacgagagagtactggatcccagctctgcagatctgcgcgacgatgttgttcgtgacttt
ctgcagcaggagtccggccacctggccccgcaacaccttaactatttttctcactggctg
ctgctctgccttttggaagcggtcaccatggaaacgaagaacactcggaagcacatctgg
cttcagtcgattgagagcagtgagaagaatgggagctgcatggggaatctgcagcttcag
gatgccgtcacagcacaggcagaagacgtctttctgcatcggttccagcggaccagatct
gctcctttacagagtgcaaccaactgtggactgaccagtggagatcggattgtagtgagc
gaccaggatggtcgcctcgtcggcttggcaacagggtacctgtgtgaggtggacaagaca
tcagtcagttgtaggctaagcaggtgagatcaagtccctctaatacccacgccagaagat
gtgctgtttcgattggatgctgatgaaggtgtggtggggctgagcactcacctgaccaac
ctctccagactgatggaaaactgtcaggacagtgaacgtctgaggaagctgattgtggac
cttcatcctccagagttcatctttaacctcagttctgttttgcccagagacgccaaagac
actgtggctgacatcctcaaaggtctcaacaaaccccagaaacaggccatgaagaaggtg
ttgctatcaaaggactacacacttattgttggcatgccgggcacaggcaaaaccacaacc
atctgcaccctggtccgaatcctgatagcttgtggcttcagtgtgttgctgaccagctac
actcactctgctgtggacaacatcctcctgaagctcaaacgcttccgggttggctttctg
cgcctcggacaaggccaaaaggttcatcctgacattctgccgtacacagaggagaacgta
aggaagaagggggttctcactctcctggagctggaggagctctataacaaagagctcgtg
gtagcaaccacctgtatgggcatcaagcatccaatcttcacgcgtcgccgttttgacttc
tgcatcgtagatgaagcatcgcagatcagccagccgatctgcctgggacccctgttctac
gtccacagatttgtgctggttggagaccatcagcagctgccaccgatagtccagaaccac
gaagctcgatctctggggatggatgaaagtctatttaagcgactggaggtccatagtgag
gcagtggtgcagctcaacgtacagtaccgcatgaacaggcagatcatgtctctgagtaac
tctttgatgtacgacgggcgtctggagtgtggatcggagaggacggccacagctctgctc
acgctgcccctcctggcctccgttcagtcagagcttcgctcacactccgagactcaccca
cagcacgacttgtcctgggtgcagtccgctctgctgcccgccaaccccgtctgcttctta
gactgctcatcggttcctgcgctggagtcagtggagcagggaggtgtgagcaaccacacc
gaagctgccctcattcacatgctgctgtctcttctaatcaaggcaggatgcaggcccagt
gacgtgggtgtcatagcgccttacaggcaacagctaaagacgatctgggctcttctccag
tctccctctttcagcggcgtggaggtgaacactgtggacaaataccagggccgggacaaa
agtctgattgttttgtcttttgtcaggagcaacacagaggaaggacacttaggagaactg
ttaaaggactggcggcgcctcaatgtggccatcaccagggcgaaacacaaactcctgatg
gtgggctctgctgtgacgctgcgacgctttccaccagtggagaaactcctcaaccatctt
cagcaggagaacatggtcatccagcttccaccggctgctcacaagactttatccagcatg
gttctgtga
DBGET
integrated database retrieval system
