Oryzias melastigma (Indian medaka): 112160819
Help
Entry
112160819 CDS
T07439
Symbol
secisbp2l
Name
(RefSeq) selenocysteine insertion sequence-binding protein 2-like
KO
K19539
selenocysteine insertion sequence-binding protein 2
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112160819 (secisbp2l)
03012 Translation factors [BR:
oml03012
]
112160819 (secisbp2l)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
112160819 (secisbp2l)
Translation factors [BR:
oml03012
]
Eukaryotic type
Elongation factors
Elongation associated factors
112160819 (secisbp2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
112160819
NCBI-ProteinID:
XP_024151409
LinkDB
All DBs
Position
LG3:10422385..10439633
Genome browser
AA seq
1093 aa
AA seq
DB search
MDAGDIKDVKLSPEVEPFIPQRKGFEGPIISMSLSGEAGGGGGGGGGGGGGIGGGSGGVE
ATSIPSYLITCYPFVQENQPSRQHPVYNGGELRWQQPNPTPGAPYLAYPIMSSPQPPVSN
DYTYYQFMPAPCPPVMGFYQPFPGTYAGPVQAGVVNPVSAEVSERPLSLGLAYGMASQRG
RGMVRSNVPPKQHLGVYQAARGRRPPTRNVAVQKEVCTLGPDGITKTVMLVDAAQQTDFP
GEASGRCAAERVSPLLWKNRTKRRRASHPAESYNEQGASEADIDSDSGYCSPKHNQAAGV
TKRTAENTAPSLGVETGVVTGSWVHVASQATPKSWGDRNGHFLRGDQRKNPEHRNFSQDF
HSGYLGHMPCSQPEQRLQPAAVPGSDLTPEPLYFEDEDEFPDLPVGGSVQRSAKPEPATP
QTHAQPKLPKNLLDNLPENSPINIVQTPIPITTSVPKRAKSQRKKALAAALATAQEYSEI
SMEQKKLQEAFTKAAGKKSKTSVELDLGDMLAALEKQQQAMKARQLNNTKPVSFTVGTTT
PFYNSGSSSLPSMLRGHQQYSAPHNPLDSTAPRIKRGKEREIPKVKRPTALKKIILKERE
GKKGKSSLEQESLGQEENGDECLHFTDDLSREAASQEENGLSVPSDTSLSPASQNSPYSI
TPVSQGSPASSGIGSPMASNAITKIHSRRFREYCNQVLSKEIDESVTLLLQELVRFQERV
YQKDPSKAKSKRRLVMGLREVTKHMKLHKIKCVIISPNCEKIQAKGGLDEALYNVIAMAR
EQEIPFVFALGRKALGRCVNKLVPVSVVGIFNYSGAEGLFNQLVSLTEEARKAYKEMVSA
LEQEQAEEALKHDKKVPHHMGHSRNHSAASAISFCSILSEPISEVNEKEYETNWRTMVEN
SDAPEAAEEEPSRPAPPVATQKDGEATTAPASVAPPSSTASQPRAGPAAQGSGDRDEVRA
DDRLELASQQSTETGSLDGSCRGPLNSSITSTTSTLVPGMLEEEDEDEEEEDDYTPEPIS
VEVPTLSSRIESWVSKTLENLNLGKSQGSTEDEEEEDEEDRGQSEEEEDLDSAELSETRI
ENKEQAEVKKVSG
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggacgctggtgacattaaggatgtgaagctttcacctgaagtggaaccatttatcccg
cagaggaaaggttttgaaggtcctataatcagcatgagtctttctggggaagcaggcggc
ggcggaggaggaggaggcggaggtggtgggggtattggaggaggcagtggaggggtggaa
gccacatccatacccagctacctcatcacctgctatccttttgtccaggagaaccaaccc
agcaggcaacatcctgtatataatggaggggagctgcgctggcagcagcctaaccccacc
cctggtgctccatacttggcctaccccatcatgtcttccccccagcctcctgtctccaac
gattacacttactaccagttcatgcctgctccttgcccaccagtgatgggcttttatcag
cccttcccaggcacctacgccggtcccgttcaagcaggtgtagtcaaccctgtctcagca
gaggtcagcgaaagacccctgtccctcggactcgcgtatggaatggccagtcaaagagga
aggggaatggtccgatctaatgtcccgccaaagcaacatttgggtgtttaccaagctgct
cggggtcgtcgacctccaacaagaaatgtagctgtgcagaaggaggtgtgcaccttaggg
cctgacggtattaccaagactgtgatgctggtggatgccgcacagcagacggatttccca
ggagaggcgtcgggtcggtgtgctgctgagcgggttagcccattgctgtggaaaaaccga
actaaaagaagacgggcttcccacccggccgaaagctacaacgagcagggcgccagcgag
gcagacatagacagtgacagtggctactgcagcccaaaacacaaccaggcagctggggtg
acaaaacggaccgcagaaaacacagcaccgtctttgggagtagagacaggtgtagtgacg
ggttcttgggtacatgtggcatctcaggcaactccaaagtcctggggagacagaaatgga
cactttctcagaggcgatcagaggaagaacccggaacacagaaacttttctcaggatttt
cacagtggctatctgggccacatgccatgcagccagccggaacaaagactgcagccggca
gctgtcccaggcagcgacctcactcctgagcccctctactttgaggatgaggatgagttt
ccagatctacctgttggagggtctgtccaacgcagcgccaaaccagaacccgctaccccg
cagacgcacgcacaacctaaactgcccaaaaacctgctggataacctaccagagaactct
ccaatcaacattgtgcagacccccattccaattactacctctgttcccaagagggccaag
agccagagaaagaaagctctggctgctgctctggctactgcacaggagtactctgaaatc
agcatggagcaaaagaagctacaggaagctttcaccaaagcagcggggaaaaagagtaag
acctctgttgagctggatctgggagacatgttggccgctctggaaaaacaacagcaggcg
atgaaggccaggcaactcaacaacaccaagcccgtgtctttcactgtgggaacaaccact
cctttttacaactcgggctcctccagcttgccgtccatgctgagggggcatcagcaatac
tccgccccacataatccccttgactccacagcgccccgcatcaagaggggtaaagagagg
gagatccccaaagtcaagagaccaactgctctcaaaaagatcattttaaaggaacgtgaa
gggaaaaaaggaaagtcgagtttagagcaagagtctttgggccaggaggagaatggggat
gagtgtctacattttactgatgatctttcacgggaagctgcttcccaggaagaaaatggt
ctgagcgttcccagtgatacatctctgtccccggccagtcagaactccccttacagcatc
accccggtgtctcagggttctcccgccagctctggaattggtagtccaatggcttcaaac
gccatcaccaaaatccacagtcggagattcagagagtactgtaaccaggtgctgagcaag
gagattgatgagagcgtgaccctgctgctgcaggagctggttcgcttccaggaaagggtc
taccaaaaggatcccagcaaggcgaaatccaagcgccgcctcgtgatgggactccgagag
gtcaccaagcacatgaagctgcacaagataaagtgtgttattatatctcctaactgcgag
aagatccaggccaaaggtggtttagatgaagctttatataatgtgattgccatggcaagg
gagcaggagatcccctttgtgtttgctttgggcagaaaagctctcgggcgctgcgtcaac
aagctggtgcctgttagcgtcgttggaattttcaactattctggagccgagggactcttc
aatcagctggtgtctctgacagaggaggccaggaaagcttataaagagatggtgtctgct
cttgagcaagagcaggcagaggaggctctgaaacatgacaagaaggtccctcaccacatg
ggacattcccgcaaccactctgccgcttcggctatctccttctgctccatcctgtctgag
cccatctctgaggtcaacgagaaggagtatgaaactaactggaggaccatggtggagaat
tctgatgccccagaggctgcagaggaagagccgagtcgccctgcgcctcctgtagccacc
cagaaggatggcgaggccaccacagctcctgccagtgtcgccccgccctcctctactgcc
tcccagccgagggcgggacccgcggcgcagggcagtggagaccgagacgaggtgcgagcg
gacgaccgcctggagctggcctcccagcagagcacagaaacgggctctttagacgggagc
tgcagggggccgctgaactcctccatcacttccaccacctccactctggttcctgggatg
ctggaggaggaggatgaggacgaggaggaagaggatgactacactcccgaaccgatatct
gtagaggtgcctaccctgagtagccgcattgaatcctgggtatcgaagaccctggagaat
ctgaacttggggaaaagccaaggaagtacagaggatgaggaggaggaggacgaagaggac
aggggtcagagcgaagaggaggaggaccttgattcggccgaactgtcagagaccagaata
gaaaacaaagagcaagcggaggttaagaaagtctcgggctga
DBGET
integrated database retrieval system
