KEGG   Oryzias melastigma (Indian medaka): 112160888
Entry
112160888         CDS       T07439                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    112160888
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:oml01009]
    112160888
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oml03021]
    112160888
Protein phosphatases and associated proteins [BR:oml01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     112160888
Transcription machinery [BR:oml03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     112160888
    Little elongation complex (LEC)
     112160888
SSDB
Motif
Pfam: ELL Occludin_ELL
Other DBs
NCBI-GeneID: 112160888
NCBI-ProteinID: XP_024151521
Ensembl: ENSOMEG00000013347
UniProt: A0A3B3DHN2
LinkDB
Position
LG3:24031024..24071354
AA seq 606 aa
MASLRELRRYGLSCGENNKSRPSTTLYHVKLTDTAIRALEAFQNLKGALQSQPIICFKGN
QGYIKIPAPTSESSSSLRVFAFYLSSDGKDQPQASFDCIHQYVLSDGREQLEGQGSIQDK
ITVCATDDSYQMTRERMSQVEKDSWSRSAIEIKPGATHPSKCIKYQKRPAPLPVSDVNLH
KQPANIRRNGGASALSQKPLKERILHLLALKPYRKPELLLWLERERSAPKDKAELGAVLE
EVAKVNLKDSSYLLRDDFYKYVQRDWPGYSEEEKQLISRLLARKVQPQAHNQTRSLQTNS
LTPKTSEDQSVAKNPAVKRLMASDSLEKLEVKRQKLADPKPQSTVNGALNGKGAHNNASL
TPNPSCHSRTETQRTSNHRDNRNGPLQSHDGFPLEHKLSGPCNEPVTESRGQEPKMNCLQ
VPQLDLDFIQQQLSSSSSSQHKKKKSKKHKDKQRERFKEDKGTERLKMSPTLKQNPDKLQ
NPEVTKAVDSEEKPDYVLNYGPITSLEQRQKYEEDFCAEYDEYKDLHSRIATITHMFVHL
GSKIKSLSPGTQEHKIMEEQILEKYNKYRKKFPGYREEKKHCEYLHEKLSYIKQLIIDYD
LSKASL
NT seq 1821 nt   +upstreamnt  +downstreamnt
atggcttcactcagggagctgcgccgctacgggctctcctgtggagaaaacaacaaaagc
agacccagcactacgctgtaccacgtcaagctgacggacacggccatcagggcgctggag
gctttccaaaacctcaagggagctttacaaagtcaaccaataatctgtttcaaaggaaac
caagggtacatcaagatccccgctcccacatcagagtcgtcttcttctcttcgtgtcttt
gccttctacctgtccagcgacggcaaagatcagccccaagccagctttgactgcatccat
cagtatgtcttaagtgacggccgtgagcagctggagggtcaaggcagcatccaggataag
atcaccgtttgcgccactgatgactcctaccagatgacccgcgagaggatgtctcaggtg
gaaaaggatagctggagccgctctgccattgagataaaacctggagccacacatccaagt
aaatgcatcaagtaccaaaagagaccagcccctctgcccgtctcagacgtgaacctccac
aagcagccagccaacatccggaggaacggcggtgcaagcgccctgtcccagaagcccctg
aaggagcgcatcctccacctgctagccctcaaaccttacaggaaaccggagctgctcctc
tggctggaacgggagcgaagtgcacccaaggacaaggccgagctgggagccgtcctggag
gaggtggctaaggtgaatctgaaagacagcagctacctgttgagggatgacttctacaaa
tatgttcagagggactggccgggctacagtgaggaggagaagcagctgatcagcaggttg
ctggccagaaaggtacaaccacaagcccataaccaaacgagaagcctccaaacaaactct
ttaacaccgaagacctcagaggaccaaagtgtggctaaaaatcctgctgtgaaacgcctc
atggcttctgactcactggaaaagctggaagttaagaggcaaaaacttgcagatccaaaa
ccccagtccacggtaaatggagccctaaacgggaaaggagcgcacaataatgcaagtctg
acccccaaccccagttgccactcaaggactgagactcaaagaacaagtaaccatagagat
aaccgaaacggcccactgcagagccatgacggctttcctttggagcacaaactgtccggc
ccttgtaacgagccggttacagaaagcagaggccaggagcccaaaatgaactgcctccag
gtaccccagctggacttggacttcattcagcagcagctcagcagcagcagcagcagccag
cacaaaaagaagaaatctaaaaagcacaaagacaagcagcgggagaggttcaaggaagat
aaaggaactgaaagactaaagatgagtcctactttgaagcagaatccagacaaacttcag
aatcctgaagtcacaaaagctgtggactctgaggaaaagccagattatgtgctaaactac
ggtcctataacaagtttggagcagcgtcagaagtacgaggaggatttctgtgcagagtac
gacgagtacaaagatctccattcccgtatcgccaccatcactcacatgtttgttcatctg
ggttccaagatcaaaagtttgtcacctggaacgcaagaacataagataatggaggaacaa
atactagaaaaatacaacaagtacagaaagaagtttccaggctacagggaagaaaagaag
cactgcgaatatcttcatgaaaaactgtcctacatcaaacagctcatcatagattatgac
ctttctaaagcttctttgtag

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