Oryzias melastigma (Indian medaka): 112160902
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Entry
112160902 CDS
T07439
Symbol
pax6b
Name
(RefSeq) paired box protein Pax-6b isoform X1
KO
K08031
paired box protein 6
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112160902 (pax6b)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
112160902 (pax6b)
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_32
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
112160902
NCBI-ProteinID:
XP_024151552
Ensembl:
ENSOMEG00000004025
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Position
LG3:20595010..20613532
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AA seq
457 aa
AA seq
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MPQKEYHNQATWESGVASMMQNKVYDISDEGHSGVNQLGGVFVNGRPLPDSTRQKIVELA
HSGARPCDISRILQTHDEVQVLDSEKVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATP
EVVAKIAQYKRECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEKQQMGADG
MYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQEGCQQQDGAGENTNSISSNGEDSEETQ
MRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR
RAKWRREEKLRNQRRQANNSSSHIPISSSFSTSVYQAIPQPTTPVSFTSGSMLGRPDSAL
TNTYSALPPMPSFTMANNLPMQPSQTSSYSCMLPTSPPVNGRSYETYTPPHMQAHMNSQS
MTTSGTTSTGLISPGVSVPVQVPGSEPDMSQYWSRLQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgccccaaaaagaataccacaaccaagccacgtgggagtctggtgtagcctcaatgatg
cagaacaaggtgtatgacatcagtgatgaaggtcacagtggcgtgaaccagcttggtggc
gtgtttgttaacggaagaccgctgccggattccaccaggcagaaaatagtggaacttgct
cacagcggcgcgcgaccctgcgacatctccagaatactccagacccatgatgaagtccag
gtgctggacagtgaaaaggtatccaacggctgcgtgagcaagatcttgggcagatattat
gaaactggctccataagaccgagggcgataggaggcagcaagcccagggtcgccactccg
gaggtggtcgccaaaatcgcgcagtacaagcgggagtgtccgtctatctttgcgtgggag
attcgtgacaggctcctgtcggaggggatctgcaccaacgacaacatacccagcgtgtca
tcaataaacagagtcctccgcaacctggctagtgaaaagcaacagatgggcgcagatggc
atgtatgacaagctgagaatgctcaacggtcagacaggaacttgggggacccggcccggc
tggtaccccggaacatcagtgccaggacagcccaaccaagagggctgccaacaacaggac
ggcgcgggagagaacaccaactccatcagctcgaacggcgaggattcagaggagacgcag
atgcgcctgcagctcaagaggaaactgcagagaaaccgcacgtcctttacgcaggagcag
atcgaggcgctggaaaaagagtttgaaagaactcattacccggatgtctttgcgcgagaa
agactagcggcaaaaatcgacttgcctgaggcaagaatacaagtatggttctcaaataga
agagcaaagtggaggcgagaggagaagctgcggaaccagcgcagacaggccaacaactcc
tccagtcacattcccatcagcagcagcttcagcaccagcgtctaccaggccatcccacag
ccaaccacaccggtgtcgttcacctcggggtcaatgctggggagacccgactctgcactc
acaaacacctacagcgcgctgccccccatgccaagcttcaccatggcgaacaatctacct
atgcaacccagccagacctcctcttactcctgcatgttgcctaccagtccgcctgtgaat
gggcggagctacgaaacatacacgccccctcatatgcaggcacatatgaacagccaatca
atgaccacttctggtaccacctcaacaggactcatctctcctggagtttctgtccctgtc
caagtcccagggagcgagcctgacatgtctcagtactggtcaagactacagtag
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