Oryzias melastigma (Indian medaka): 112160917
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Entry
112160917 CDS
T07439
Symbol
irx6a
Name
(RefSeq) iroquois-class homeodomain protein IRX-6a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112160917 (irx6a)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
112160917 (irx6a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
112160917
NCBI-ProteinID:
XP_024151586
Ensembl:
ENSOMEG00000015760
LinkDB
All DBs
Position
LG3:complement(26170381..26174870)
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AA seq
501 aa
AA seq
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MVTKEAAMSFSQFGYPYNATSQFFVSANPSTTCCDSISRSVSDGTGSSQTAAAAAAAASF
CCPPYENRLLASSRTELNAALGMYSSPYAAAAAASQNYANYFQYSADPSALYSSLNPQYD
IKDSTSTLHSGITQTAAYYPYDHSLGQYQYDRYGTVDFNGTARRKNATRETTSTLKTWLY
EHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKTSDDRKDDL
SKSDQDITKNSSDCKEEKDLHLSDLEDMDEEDCDKLDSDCEKVAADEPDLQRVMAVSGAL
HKRDCTSDLHLSLTNSFHSFPCAIKSAPALPPLPSDFLESKAAPSTGSTAGAVSLSHFDA
SEKPRIWSLARTAASGVILSAQQHGSELRNSAGDCQLQSSRISVQCGAMRGLHESSSVNN
AESPFSEGSSLHSKVCGTGSYSHKGLQLNCPSYTALQETCQYSSIEGFSGGKAEIQSSDL
SEACGTAQDDKVTAFRPVMKR
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggtaacaaaagaagcagctatgtctttctcgcagtttggatatccttacaatgcaact
tcacagtttttcgtgtcggcaaaccccagtacgacttgctgcgattcgatttccaggtcg
gtctctgacgggacagggagctcccagaccgccgccgctgccgccgccgccgcctccttc
tgctgccccccctacgagaaccggctcctggcgagcagccggacggagctgaacgcggcg
ctggggatgtacagctctccttacgcagcggcagctgcagccagccagaactacgccaac
tacttccaatacagcgccgacccgtccgcgctctactcctctctgaaccctcagtatgac
atcaaggacagcacaagcactttacactccggcatcactcaaacggctgcatactaccca
tacgatcactcactgggacagtatcagtacgacagatacgggacggtagatttcaacgga
acagcacgaaggaagaatgccactcgagagaccaccagcaccctgaaaacgtggttatat
gagcaccggaagaacccctaccccaccaaaggagagaagatcatgctggccatcatcact
aaaatgactctcactcaggtctccacctggtttgccaacgccaggcggaggcttaaaaag
gaaaataagatgacctggtcaccaaagaacaagaccagtgatgacaggaaggacgacctc
agcaaaagtgatcaagacataaccaaaaactccagtgattgcaaggaggagaaggatcta
catctgagtgatctggaggacatggacgaggaagactgtgacaagctggacagcgactgt
gaaaaggtggcagcagacgagccggacctccaaagggtcatggcggtttccggagctctt
cacaaaagagactgcacctccgacctgcacctgagcttaaccaacagcttccactcgttc
ccctgcgccatcaaaagcgcccccgccctccctcctctcccctccgacttcctggagtcc
aaagccgccccttcgaccggctcgacggcaggagcggtgtccttgtctcacttcgacgcg
tccgaaaaacctcggatttggtctctggctcggacggcggcttcaggggttatactgagt
gctcagcagcacggctccgaactgagaaattcagcgggggactgtcagctccaaagctcc
cgaatttctgtacagtgtggggccatgaggggcctccacgaatctagcagtgtcaataat
gctgagagccccttctcggagggctcgtccttgcactcaaaagtctgtggaactggcagc
tacagtcataaaggcctgcagcttaactgtccgtcctatactgcactccaagagacatgt
cagtactccagcatcgaaggattctctgggggcaaagcagagatccagtcatctgacctc
agtgaagcctgcgggaccgcgcaggatgacaaggtcactgcattcaggccagtcatgaag
aggtga
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integrated database retrieval system
