Oryzias melastigma (Indian medaka): 112160942
Help
Entry
112160942 CDS
T07439
Name
(RefSeq) retinoic acid receptor beta
KO
K08528
retinoic acid receptor beta
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112160942
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oml03310
]
112160942
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
112160942
Nuclear receptors [BR:
oml03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
112160942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
112160942
NCBI-ProteinID:
XP_036070114
Ensembl:
ENSOMEG00000021127
LinkDB
All DBs
Position
LG11:18602863..18680398
Genome browser
AA seq
474 aa
AA seq
DB search
MKTASRTQSCSSPSLVQMRRYTHEVYPYLFPSVISSLPQLRPPSPQRSQVQQPCSSSSNT
PSPAAIETHSTSSEELVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRS
IQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFAVGMSKESVRNDRNKKKKESPKPDLA
ESYELSAEQETIIEKIRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKC
IIKIVEFAKRVPGFTALTIADQITLLKAACLDILILRICTRYTPDQDTMTFSDGLTLNRT
QMHNAGFGPLTDLVFTFANQLLPMEMDDTETGLLSAICLISGDRQDLEEPSKVDQLQEPL
LEALKIYVRKRRPSKPHMFPKTLMKITDLRSISAKGAERVISLKMEIPGSMPPLIQEMLE
NSDGQDGQSSGNTSTKAGAAPSSTDSPPKASDAPESPESLDNEGGAATSSSDEP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccgccagccgcacccagtcctgcagcagtccctccctggtccagatgaggcgc
tacactcacgaggtctatccctacctgtttccatcagtcatcagctccctgccccagctg
cgtcccccctcacctcaaagatcacaagttcagcagccgtgcagcagcagcagcaacaca
ccgtcaccagccgccatcgaaacccacagcaccagttctgaggagctggtccccagcccg
ccgtccccaccgccgcctccccgggtttacaagccctgcttcgtctgccaggacaagtcc
tcgggataccactatggtgtcagtgcatgtgagggctgcaagggctttttccgccgaagc
atccagaagaacatggtttacacgtgtcaccgggacaagaactgcatcatcaacaaggtg
accaggaaccgctgtcagtactgccgcctgcagaagtgcttcgcagtgggaatgtccaaa
gagtctgttcggaatgaccgcaataagaagaagaaggagagtccgaagccggatcttgct
gagagctacgagctgtcggccgagcaggagaccatcatcgaaaagatccgtaaggcccat
caggaaaccttcccatccctctgccagctgggcaaatacaccacgaactcgagcgcagat
caccgagtcagacttgacctgggcctgtgggacaagttcagcgagctggccaccaagtgc
attatcaagatcgtggagtttgccaaacgagtgcctggcttcacggcgctgaccatcgcc
gatcagatcacgctcctgaaggccgcctgtctcgacatattgatcctccgcatctgtacg
aggtacacccccgaccaggacaccatgaccttctccgacggactcaccctcaaccgcaca
cagatgcacaacgccggcttcggccccctgaccgacctggttttcactttcgccaaccag
ctgctgcccatggagatggacgacacggagacgggcctcctcagcgccatctgtctcatc
tcgggagaccgtcaagacctggaggaaccctccaaggtggaccagcttcaggagccgctt
ctggaagctctgaagatctacgtgaggaagcggcgaccgagcaaacctcatatgttcccc
aaaaccctgatgaagatcacagacctgcgcagcatcagtgcaaaaggagcagaacgtgtc
atctcgttgaagatggagattccaggctccatgccccccctcatccaggagatgctggag
aactcggatggtcaggacggccagagcagcggcaacacttccaccaaggccggtgccgcc
cccagcagtacagacagtccccctaaggcctctgatgcaccagagtcaccagagtccttg
gacaatgaggggggcgccgcaacatcatccagtgatgaaccctaa
DBGET
integrated database retrieval system