Oryzias melastigma (Indian medaka): 112160945
Help
Entry
112160945 CDS
T07439
Symbol
tshz3b
Name
(RefSeq) teashirt homolog 3b
KO
K09236
teashirt
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112160945 (tshz3b)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112160945 (tshz3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-C2H2_2
zf-C2H2_6
Zap1_zf1
zf-met
zf-C2H2_3rep
Zf-C2H2_ZNF451
Homeobox_KN
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
112160945
NCBI-ProteinID:
XP_024151642
Ensembl:
ENSOMEG00000021471
UniProt:
A0A3B3DX18
LinkDB
All DBs
Position
LG3:33693535..33736667
Genome browser
AA seq
1219 aa
AA seq
DB search
MPRRKQQAPRRAAAYVPEDEKEAALLDEDHDGEDSAQEGEEATVKLLCPDKNFLLKDRPG
STGIHDSPNAADFSGQEMDSESHLSESSDRMSDFDSSSIKNEEDVVSKDPSNGLSPSSSA
MMAAAPTSLSGDEAMLPAAGSVADSLEKMKAIYTSFLTNSYWSTLNLNMSQPPAEKLPRS
HSSSSSSSSSSSCGSGGYDWHQTAMAKTLQQASQNHHNRLSMAQHPVVAVSTASTEPNLF
STVQLYRQSSKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDSEGT
KRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVPLKEPVTP
VAAKIISSARKRVPIDLDIPSSPDSTGGTTPKPASLNDASDILQKINNPYITPNNRYGHQ
NGASYAWQFESRKSQILKCMECGSSHDTLQELTAHMMVTGHFIKVTNSAIKKGKPVIESS
PQAPMSNSTTEEKVQSVPLAATTFSPPPAPVPPPTSMSPSAMVVEIKKEEKEEGCTEEPV
ITNTLKDKRAGGEEDGEEKFDISSKYTYLTEEDLDDSPKGGLDILKSLENTVTSAINKAQ
NGAPSWGGYPSIHAAYQLPNIMKLSLGNSGKSSPLKYMFPGGEILSPTGKSQTLLSPPSR
QTSPLPKNNFHAMEELVKKVTEKVVKVEEKTREPAAALKDSPLRHATPSPCNSETENAAQ
GESPKENRANCETPDKGSGGGQGEDGSGGTDHRDSNGSITMKESVENGVESPAVISPLPT
PLCGSTTIITDHPPPEQPFVNPLSALQSVMNVHLGKAAKPALPSLDPMSMLFKMSNSLAE
KAAVASSTPPAHAKKTNNDHLDHYFYQQHLSNDQPIDLTKGKGADKSSNGGSLGSTALSS
TTSTPSVSPSSAVAMTKASAAVASFMSTSPLRENALSDISDMLRNLTESQATSKSSTPTS
QCERSDIEGATPEETEDVSPAQKRKGRQSNWNPQHLLILQAQFASSLRQTNDGKYMMSDL
SPQERMHISRFTGLSMTTISHWLANVKYQLRRTGGTKFLKNLDSGHPVFFCSDCASQIRS
PSTYVSHLESHLGFRLRDLAKLSGEQLLTQISQHHHQRHTKGLTEKLFANLHPTSHPLPS
SLATSLPSTLPMSMSSSLTASLVKSPSPSPDDDDGGAIYQCKLCNRTFASKHAVKLHLSK
THGKSPEDHLMYVCELDKP
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggaggaagcagcaagcgccgcggcgcgccgcagcttacgtccccgaggatgag
aaagaagccgccctgttggacgaagaccacgacggagaagactcggcccaagaaggcgag
gaagcaaccgtcaagctcctgtgtccggacaagaacttcctcctcaaggacagacccgga
tccaccggcatccacgactcgcccaatgctgccgacttctccggtcaggagatggacagc
gagtcccacctgagtgagtccagcgacagaatgtccgacttcgacagctcctccatcaaa
aacgaggaagacgtcgtctctaaagacccttccaacgggctgtccccgtcctcttctgcc
atgatggccgcagctcctacctcactcagcggagatgaggccatgctccccgcagccggg
tctgtggccgacagcctggagaagatgaaggccatttacacctccttcctgaccaattcc
tattggtcgactctgaacctgaacatgagccagccgccggcagagaagctgcctcgcagc
cacagcagcagcagcagtagcagcagcagcagcagctgcggcagcggcggttacgactgg
catcagaccgctatggccaaaactctgcagcaggcctcccagaaccaccacaacagactg
agcatggctcaacaccccgtggtggccgtgtccacggcgtccacggaacccaacctcttt
agtactgttcagctctaccggcagagctccaagctgtacggctccatattcaccggcgcc
agcaagttccgctgcaaggactgcagcgccgcctacgacactctggtggagctcacggta
cacatgaacgagaccgggcactaccgcgacgataaccacgagacagacagcgagggcacc
aagcgctggtccaagcccaggaagcgttccttgctggagatggagggcaaggaggatgca
caaaaggttctgaagtgcatgtactgcggacactccttcgagtccctccaggacctgagc
gtccacatgatcaagacgaaacactatcagaaagtgcctctgaaggaacccgtgacgcca
gtggcagctaagatcatctcctccgcccgaaaaagagtccccatcgacctggacatcccc
agctcgccagactccaccggaggcaccacccccaagcccgcttccctcaatgacgccagc
gacatcctccaaaagatcaacaacccctacatcacccccaacaaccgctatggacaccag
aacggcgccagctacgcctggcagttcgaatccagaaagtctcagatcctgaagtgcatg
gagtgcggcagctcccacgacacgctgcaggagctcacggctcacatgatggtgacggga
cacttcatcaaagtcaccaactctgctatcaagaaggggaaacccgtcatcgagtcgtca
ccccaagctcccatgtccaattcaacaaccgaggagaaggttcagtcggtccccctggcg
gccacaaccttctcccctccacctgctccagtgcctcctcctaccagcatgtcccccagc
gccatggtggtggagataaagaaggaagagaaggaagagggctgcactgaagagcccgtc
atcaccaacactctcaaagacaagagggcaggaggggaggaggacggcgaggagaagttt
gacatttcttccaagtacacctatctgacggaggaggacctggacgacagtccaaaaggg
ggtctggatattctcaagtctttggagaacaccgtgacctcggccatcaacaaggctcag
aacggagctccaagctggggtggatatcccagcatccatgctgcctaccagctcccaaac
ataatgaagctctcactcggaaactccggcaagagctcccccctcaaatacatgttccct
ggaggggaaatcctctccccaaccggtaagagtcaaaccctgctttcaccgcccagtcgc
cagacctccccactgcccaaaaataacttccatgccatggaggaactagtgaaaaaagtg
acagagaaagtggtcaaggtggaagagaaaacccgagaacccgccgccgccttgaaggac
tctcctctgagacatgccacgccgtcgccctgcaacagtgagacggagaacgcagcccaa
ggcgagtcgccgaaagaaaacagagcaaactgtgaaacccccgacaagggaagtggtggg
ggtcaaggagaagatggaagcggtggaaccgaccacagagattcaaacggtagcataacc
atgaaggaatcggtagagaacggagtggagtcccccgctgtgatctcccccctacctacc
cctctgtgtggcagtacaaccatcatcaccgaccacccgcctccagaacagcccttcgtc
aaccctctgagcgcactgcagtcagtgatgaacgtacacctggggaaggccgccaagccc
gccttgccgtccctcgaccccatgagcatgctgttcaagatgagcaacagcctggcagag
aaggcagccgtagcttcttccaccccaccagcgcacgccaaaaagaccaacaacgaccac
ttagaccactacttctaccagcagcacctaagcaacgaccaacccatcgacctcaccaaa
ggaaagggggccgataaaagcagcaacggaggctctttgggctcgacggctctgtcctct
accacttccacgccgtccgtgtccccgtcctcagctgtcgcgatgacgaaagcctctgcc
gccgtcgcctccttcatgtccacctcccctctgagagaaaacgccctgtccgacatctcg
gacatgctgcgaaacctgacggaaagtcaggccacatccaagtcctccacgccgaccagc
cagtgcgagcgctccgacatcgaaggggccacgccggaggagaccgaggacgtctctcct
gcacaaaaacggaaaggtcgccagtccaactggaacccccaacacctccttatactgcaa
gcacagtttgcttctagtttaagacaaaccaacgacggcaagtacatgatgtcggacctg
agcccccaggaacgaatgcacatctcccgcttcactggcctttccatgactactatctca
cactggttggctaatgtaaagtaccagctgagaagaaccggcggcaccaagttcctgaag
aacctggactctggtcacccggtgttcttctgcagtgactgcgcctcacagattcgctcg
ccgtccacctacgtcagccacctggagtcccatctcggctttcgcctgcgggacctggcc
aagctttcgggcgagcagctgctcactcagatttcccagcatcatcaccaacgccacacg
aaaggactgaccgagaaacttttcgctaaccttcacccgaccagccatcctctaccgtcc
tctttagccacgtccctgccctccactctacccatgtccatgtcctcgtccctgaccgcg
tccttggtcaagtcgccgtcgccctctccggacgacgacgacggcggggccatctaccag
tgcaagctctgcaaccggacttttgcaagcaagcacgcggtgaagcttcacctgagcaag
actcatgggaaatcccccgaagaccacctcatgtacgtgtgtgagctggataagccgtag
DBGET
integrated database retrieval system
