Oryzias melastigma (Indian medaka): 112160998
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Entry
112160998 CDS
T07439
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 1
KO
K04349
Ras-specific guanine nucleotide-releasing factor 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04010
MAPK signaling pathway
oml04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112160998
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112160998
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
GOLGA2L5
BIG2_C
MYO6_lever
P4Ha_N
IQ
EGF1_RECK
DUF641
Motif
Other DBs
NCBI-GeneID:
112160998
NCBI-ProteinID:
XP_024151715
Ensembl:
ENSOMEG00000013176
LinkDB
All DBs
Position
LG3:complement(23824900..23849612)
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AA seq
1256 aa
AA seq
DB search
MQKGIRLNDGHITYLALLAKKDGTRRGCLSKKSSDNTKWHSKWFALLQNMLFYFENDSSS
RPSGLYLLEGCVCDRAPSPKPSLSAKECLEKQYYFTVTFNHDNQKALELRTEDVKDCDEW
VAAITQASYRNLATEHETLMQKYLHLLQIVETEKTVAKQLRQQIEDGEIEIERLKSEIAA
LLKDNEKIQSNPEVPPSEDDTEIKKIKKVQSFLRGWICRRKWKTIIQDYIRSPHAESMRK
RNQVVFSMLEAEAEYVQQLHILVNNFLRPLRMAASSKKPPITHDDVSSIFLNSETIMFLH
QIFYQGLKARIASWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQILAHCKQNRDFDKLL
KQYEAKPDCEERTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERNSLDYAKSKLEELS
RIMHDEVSETENIRKNLAIERMIVEGCEVLLDTSQTFVRQGSLIQVPMSEKGKITRGRLG
SLSLKKEGERQCFLFSKHLIICTRGSGGKLHITKNGVVSLIDCTLMEEPEGTDDESKERS
AQDTEHLDFKVMVEPKDVQPFTVILVASSRQEKSAWTSDISQCIDNIRCNGLMMNAFEEN
SKVTVPQMIKSDTSLYCDDVDIRFSKMMNSCKVLQIRYASVERLLERLTDLRFLSIDFLN
TFLHSYRVFTSADVVLDKLITIYKKPISAIPARSLELFFASSQNNKLLYGEPPTSPRASR
KFSSPPPLSITKTSSPNRRRKLSLNIPIITGGKALDLAALSCSPNGYASMHSSMSPFSKT
TLDINKLYVSSTMASKIPDEAEPKAEGKAEEAVLNKQDLSVREECDEEPSQSDEAEAEMS
SPKSPSTPKNVKSKNSEFSLFNFNNGMVVSSCRELENNRSALSAASAFAIATAGANEGTP
TKEKYRRMSLASTGFPTDQRNGDKEFVIRRAATNRVLNVLRHWVSKHSQDFELNSELKMR
VIGFLEEVMHDPELLTQERKAAANIIRTLTQEDPGDSQATIEEITKMAMEESKTEPFENH
SALEIAEQLTLLDHLVFKVIPYEEFFGQGWMKNDKNERTPYIIKTSKHFNDISDRIASEI
LQWDDVNMRVAVLEKWVAVADICRCLHNYNAVLEITSSLNRSSIFRLKKTWLKVSKQTKT
VIDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDNLVNFSK
MRMISHIIREIRQFQQTAYKIDYQTKVAKYLLDNSTALDEESLYKASLRIEPKTSS
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagggatccggctgaatgacgggcacatcacctacctggctctgctggcgaag
aaggatgggacgaggagaggatgcctgagcaagaaaagctcagacaacacaaaatggcat
tcaaagtggttcgccctgctgcagaacatgctgttttatttcgaaaacgactccagctca
cgcccctctggactctacctgttggaggggtgtgtttgcgacagagcaccgtccccgaaa
ccgtctctgtcagcgaaggaatgtctggagaaacagtattatttcactgtcacgttcaac
cacgacaaccagaaggctctggagctgcgcacagaagacgtcaaggactgcgatgagtgg
gtggccgccatcactcaagccagttacagaaacctggcgacagagcatgagaccctcatg
cagaagtatcttcatctactccaaatagtggagacggagaaaacggttgccaagcaactt
cgacaacagatagaggatggagaaatcgaaatagaacggctaaaatcagagattgctgcg
ctgctgaaggacaatgaaaagatccagtcgaatccagaggtgcctcccagtgaggacgac
acggagatcaagaagatcaagaaggtccagagtttcctgagaggctggatttgccgcagg
aagtggaaaaccatcatccaggactacattcggtctccgcacgcggagagcatgaggaag
aggaaccaggtggtgttcagcatgctggaggctgaggccgagtatgtgcaacagcttcac
atcttggtcaacaatttcctgcggccactgcgcatggcagcgagctccaagaagcctccc
atcacacacgacgacgtcagcagcatcttcctgaacagtgagaccataatgttccttcat
cagatcttctatcagggtctgaaggccaggatagccagctggccaacactggtgctagct
gacctgtttgacatcctgctgcccatgctgaatatctaccaggagtttgtgaggaaccat
cagtacagcctgcagatcctggcccactgcaaacagaaccgagactttgacaagctgctg
aagcagtacgaggccaaacctgactgtgaggagcggacgctggagaccttcctcacctac
cccatgtttcagattccacgttacatcctgactttgcacgagttgctggctcacactccg
catgagcacgtggaaagaaacagtttggattacgccaagtcaaagctggaagagctttca
agaatcatgcacgatgaagtgagcgagacggagaacatcaggaagaatctggctatcgag
cgcatgatcgtggagggctgcgaggtgctgctggacaccagccagacatttgtccgacaa
ggatccctgatccaggtgccgatgagtgagaaggggaagatcaccagagggcggctggga
tctctgtctctgaagaaggaaggcgagaggcagtgcttcctcttctccaaacatctcatc
atctgcactagaggatctggagggaaacttcatatcactaagaatggagtggtgtctctc
atcgactgcaccctgatggaggagccagagggcacggatgatgaatccaaagaacgcagc
gctcaggacactgagcacctggactttaaggtgatggtggagcccaaagacgtccaaccg
ttcacagtcatccttgtggcttcgtcacgacaggaaaagtcagcctggacaagcgatatc
agtcagtgcattgataacatccgctgcaatgggttgatgatgaacgcctttgaggaaaac
agtaaagtcaccgtacctcagatgatcaagtcagacaccagcctgtactgcgatgacgtc
gatatccgcttcagtaagatgatgaactcttgcaaggtgctgcagatccgctacgccagc
gtggagcgcttgttggagaggctcacggatttgcgattcctctccattgacttcctgaac
accttcctccactcatatcgtgtcttcaccagtgctgatgtggtattggacaagctcatc
accatctacaagaagccaatcagtgccattcctgcacgctctttggagcttttctttgcc
agcagccagaacaacaaactcctctacggcgagccacccacgtcgccacgtgccagccgc
aagttctcctcccctcctcccctctccatcaccaagacgtcgtctcccaaccgccgtcgc
aaactttccctcaacattcccatcatcacaggcggcaaagccctggacttggctgcgctc
agctgctctcccaacggctatgcaagcatgcactcctccatgtcccccttcagtaagacc
acgctcgacatcaacaagctctacgtgtccagcacaatggccagcaaaatcccagacgaa
gcagagcccaaagctgaagggaaagctgaggaggccgtcctcaacaagcaagatttgtca
gtgagggaagaatgtgatgaagaaccaagtcaaagtgatgaggcagaggcagaaatgtcg
tccccaaaatctccatccactcccaagaatgtcaagtcaaagaactctgagttttccctg
tttaacttcaacaatggcatggtggtgtcatcctgtcgagagctggaaaacaaccgcagt
gccctttctgctgcgtcggcctttgcgatcgccacagctggagccaatgaaggcacgccg
accaaggagaagtaccgccggatgtctctggccagcacaggttttcctactgatcagagg
aatggagacaaagagtttgtcatccgcagagccgccaccaacagagtgctgaatgtgctg
cgccactgggtctccaaacactcacaggactttgagctcaactcagagttgaaaatgcgt
gtaattggcttcctggaggaagtgatgcacgatcctgagctgctgacacaagagagaaag
gcagctgccaacattatcaggactctcactcaggaggatcctggagacagtcaagccacc
attgaagagatcacaaagatggccatggaggaaagtaagactgaaccgtttgaaaaccac
tcagccttggagattgctgagcagctcacgctgctcgatcacctggttttcaaagtcatt
ccctacgaggagttctttggtcaaggatggatgaagaacgataagaacgaaagaacaccc
tacatcataaagacctccaaacattttaacgacatcagcgacaggattgcctcagagatc
ctgcagtgggacgatgtcaacatgcgagtggccgtcttagaaaaatgggtggctgtggcc
gacatctgccgctgcctgcacaactacaacgccgtgctggagatcacctcctcgctcaac
cgcagctccatcttccgcctcaagaagacctggctcaaagtgtccaagcagaccaagact
gtgatcgacaagttacagaagttggtgtcatcagagggtcggttcaaaaacctgagagag
gcactgaaaaactgtgaccctccttgtgttccctacctgggaatgtacctgactgacctg
gccttcatcgaggaaggaacgcccaactacaccgaggacaacctggtcaacttctccaag
atgaggatgatttcacacattatcagagaaatacgacaatttcaacaaacagcttacaag
atagattatcagacaaaggttgcaaagtacctgctggacaacagcacagcgttggacgag
gagagcctgtacaaagcttctctgagaattgaacccaaaacttcatcatga
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integrated database retrieval system
