Oryzias melastigma (Indian medaka): 112161024
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Entry
112161024 CDS
T07439
Symbol
tdrd3
Name
(RefSeq) tudor domain-containing protein 3 isoform X1
KO
K18404
tudor domain-containing protein 3
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112161024 (tdrd3)
03036 Chromosome and associated proteins [BR:
oml03036
]
112161024 (tdrd3)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
112161024 (tdrd3)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
112161024 (tdrd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RMI1_N_C
UBA_7
SMN_Tudor
TUDOR
UBA
UBA_8
UBA_4
SGF29_Tudor
Motif
Other DBs
NCBI-GeneID:
112161024
NCBI-ProteinID:
XP_024151752
Ensembl:
ENSOMEG00000015668
UniProt:
A0A3B3DLT1
LinkDB
All DBs
Position
LG3:complement(12992228..13006421)
Genome browser
AA seq
779 aa
AA seq
DB search
MSDLADLLIKEGWYLTDEGIAELKGTSEKTTHSDIIRIALDTDLRPIGSKFLPSDINSGK
TEKLEGPCVLQVQKVRNISAPKDNEESQGAPRMLRLQMTDGHTTCVGLEFKHLSKISLNT
PPGTKVKLLGTVQVKNGCLLLEDSNISVLGGEVEHMVEKWELQRSLAKHSRSNIGAEGGP
PPFVPFGQKCGRKDEVDSSELDQRKTLQTQNVVKSPDENDEFEKQRTAAIAEVAKTKEGP
RSFGGGGNAGSNLSNAASSSRSRDANQQRRREEKFEKAESRPEGNYRELVDERALRDIME
MGFNREAARQALMDNNNNLEVALNSLLTGSSGGRPSSVVLESNKFQPRGRGKGRGRSRNE
DEDEGVGGRPSGPSTLFDFLESKMGAFSVDDTKSQTQQRNHESKANFSNSNYHTKEHSQP
RFSSHYEHKPQRNDRPPRFNKDTDFPKPGQEHIPNLMACPTSAQSQQWRSQERWPRGTPD
QTVNDRRQTRDDQLVSSATSLKPSEEPQQKLEFNGSYHQQSRSREGGSNISGFSQKRGLK
NDGPMPKPSNSAGMDADGRGNNKEANNSRRKPKVDRQNSDHFDRQRNIGQPNFNSKGASW
GTQEVGFPQTLCTLTGVPSHFQNGDLEHKRTGPIKPGNMPCPPNREQIPRKNMPQNLGPK
RRPGQGKGQGPRGPDRNQITEHGWKPGDQCLALYWEDSKFYHARIDAVHPSGSTAVVVFS
DYGNCEEVLLENIKPVSADMLEEDDGFYDSSLEFRRGGDGQPRRTRPTQQYYQPPRARD
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacttggcagatttactgatcaaagagggctggtacctcacagatgaaggtatt
gcagagctgaagggaacttctgaaaaaacaacacacagtgacatcattcgcattgcactt
gatacggatctgaggcctatcggaagcaagtttttaccatctgatatcaacagtggaaag
actgagaagctggagggcccatgtgttctccaggtacaaaaggtaagaaacatctcagcc
cccaaagacaacgaggagtcccagggtgcaccacgtatgctgcgcctacagatgacagac
gggcacaccacctgtgtcggattggagtttaaacatctgtccaagattagtcttaataca
ccccctggaacaaaggtgaagcttcttggtacagtccaggttaaaaatggatgtttgctt
cttgaagattcaaacatctctgtccttggaggagaagttgagcacatggtggagaaatgg
gagctccaaaggagtttggcgaaacacagccggagcaacatcggagcagaaggggggcca
cctccctttgtgccattcggtcagaagtgtggaaggaaagatgaagtagacagcagcgaa
ctggaccagcggaaaaccctccagactcagaatgtggtcaagagtcccgacgagaacgac
gagtttgaaaagcagcgaacagcagcgatcgccgaggtggccaagacaaaagagggcccc
cgcagctttggcggtggcggaaatgcgggcagtaatttatccaacgccgcttcctcctcc
cgaagcagagatgccaaccagcaaaggagacgtgaagagaagtttgaaaaagcagaaagc
aggccagagggaaactacagagagttggtggatgaacgagctctgagagacatcatggaa
atgggcttcaacagagaggcagctcgacaagctctgatggataataacaacaaccttgaa
gtggcactaaacagtctactgactggaagttctggtggccgacccagttctgtggtgctt
gaatcaaacaagtttcaacccagaggcagagggaagggaagaggcaggtccagaaatgaa
gacgaggatgaaggagttggaggaagaccttctggaccgagcactctgtttgactttctg
gaatccaaaatgggcgctttctctgtggatgatacgaagagtcagacacagcagaggaac
cacgagagcaaagcaaatttctcaaattcaaactaccataccaaagagcattctcagccc
aggttctcctcacactatgaacacaaaccgcaaaggaacgaccgacctccaagatttaac
aaagacacagatttccccaaaccaggccaggagcacatccccaacctaatggcctgtcca
acgtcagctcagtctcagcagtggaggagccaggagaggtggccacgaggaaccccagat
caaacggttaatgacaggcgacagacgagagatgatcagctcgttagctcagccacttcg
ctaaagccctcagaagaacctcagcagaagttggagtttaatggatcttaccaccaacag
tccagaagtcgagaaggcggctcgaatatatctggattttctcagaagagagggctgaaa
aacgatggacccatgcctaaaccaagtaattctgcaggaatggatgcagatggaagggga
aacaataaagaagccaacaacagcaggaggaagccaaaggtcgaccggcaaaactcggac
cactttgatagacaaagaaatattggccagcccaactttaactctaaaggagctagctgg
gggactcaggaagtaggatttccacaaactctttgcacgttgacaggggttccttctcat
tttcaaaacggagatttggaacataaaagaacagggccaattaagcctggaaacatgccc
tgtcctccaaacagggagcaaatacccagaaaaaatatgccccaaaacttgggaccgaag
agaagaccggggcaaggcaaaggccaaggccctcgaggaccagacaggaatcaaatcacg
gaacatggatggaaacctggagaccagtgtctggcgctgtactgggaggacagcaaattc
taccacgccagaatagacgctgtgcatccatctggctccacagctgtggttgtgttcagt
gactatggaaactgtgaggaggtcctcctggagaacatcaaacctgtgtctgctgacatg
ttggaggaagatgacggcttctacgacagttcactggagtttcgccgtgggggagacgga
cagccgagacgaacgaggcccacgcagcagtactaccagccccccagggcgcgtgattga
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