Oryzias melastigma (Indian medaka): 112161037
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Entry
112161037 CDS
T07439
Symbol
slc6a5
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2 isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
112161037 (slc6a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oml02000
]
112161037 (slc6a5)
Transporters [BR:
oml02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
112161037 (slc6a5)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
112161037
NCBI-ProteinID:
XP_024151766
Ensembl:
ENSOMEG00000003689
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Position
LG3:complement(2410660..2443723)
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AA seq
769 aa
AA seq
DB search
MFQDCSEQREMSTHAPAGFIPAQQQPDGAAGIPNNKPDNAAACAPHQQPPPCNESKTFYP
AENKPGELDTNKAYGTFKSAPPPPVPGSAAVNSDFRKDSVGSARGDPLRATAEQNNTVGN
WTAMSQTTIILGADGNTSVQPGAVTGGEDDDEDGDENKARGNWSNKLDFILSMVGYAVGL
GNVWRFPYLAFQNGGGAFLIPYLTMLGIAGIPIFLLEVSLGQFASQGPVSVWKCIPALQG
CGIAMLIISVLIAIYYNIIMCWTLYYLFASLKGSLPWANCRNEWNTVECKDKDMLLLDSC
ILRDRNTISVKNSSFCLSANAVGNLTKLLNMSMDANKTYVSPSEEYFKYNVLHISKGIEY
PGDIRWPLAGCLFLAWLIVYASLAKGIKSSGKVVYFTATFPYVVLIILLIRGVTLPGAGD
GILYFITPKWEKLNDAKVWKDAATQIFFSLSAAWGGLITLSSYNKFHNNCYRDTIIVTCT
NSATSIFAGFVIFSVIGFMAHELKVPIEKVADEGPGIAFVVYPEALTRLPLSPFWAIIFF
LMLLTLGLDTMFATIETIVTSVSDEFPKYLRKHKPVFTLVCCASFFILGFPMITENGMYM
LQLVDTFAASYSLVIIAIFELLGISYLYGLQRFCADIEMMIGFQPNRFWRICWAFVTPTI
LTGILGLSLYQWKVMTYEDYTYPTWSMILGWLMVICSVIWIPIMFLIKMYLAPGSVSERL
KLVCSPQPDWGPFLMKHRGDRYKNMIDPLGTNSLGLKLPPKDFHLGSYQ
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggattgctctgagcaaagagaaatgagcacgcacgctcccgccggcttcatc
ccggcacagcagcagccggacggagccgctggaatcccaaacaacaagccggacaacgcg
gccgcgtgcgccccgcaccagcagccgcctccctgcaacgagagcaaaactttttacccc
gcggagaataaaccgggagagctggacaccaataaagcatatgggacgttcaaaagcgcc
cccccgccgccggtgccgggatcagcggcggtgaactcggattttaggaaggattcggtc
ggttcggcccgcggcgacccgctccgggcaaccgcggagcagaacaacacggtgggcaac
tggacggcgatgagccagaccaccatcatactgggagcagatgggaacacgtctgttcag
ccgggagccgtgacggggggggaggatgatgacgaggacggagatgagaataaggccaga
ggaaactggtcaaacaaactggactttattctgtccatggttggttatgcggttggactg
gggaacgtgtggaggtttccttatctcgccttccaaaacggtggaggagcgtttctcatc
ccctacctgacgatgctgggcattgcaggaatcccgatcttcctgctggaagtttctttg
ggtcagtttgccagccaggggcccgtgtctgtctggaaatgcattccagccctgcaaggt
tgcgggattgccatgttgataatatctgtcttgatagccatatactataatattataatg
tgctggacactgtactacctgttcgcttcgttgaagggctcactgccatgggctaactgt
aggaatgagtggaacacggtggaatgtaaggacaaagacatgctgctgttagactcgtgc
atcctgcgcgacagaaacaccatttcagtcaagaactccagcttctgtctgtctgcaaac
gccgtggggaacctgaccaaactgttgaacatgagcatggacgccaacaaaacctacgtc
agccccagtgaggagtactttaagtacaatgttttgcacatttccaaagggattgaatat
ccaggagacatccgctggcctctggccggctgcctgtttttggcctggctcattgtctat
gcttctctagccaaaggaatcaagtcgtcaggaaaggtagtgtatttcacagcaacattt
ccctacgtggtgctgatcatcctcctgatcagaggagtgaccctccccggcgccggggac
ggcatcctttacttcatcacgcctaaatgggagaaactgaacgatgcaaaggtatggaaa
gacgcagcgactcagatatttttctctctgtcagctgcgtggggaggtttgatcacgctc
tcctcctacaataagttccacaataactgctacagggacaccattatagtgacgtgcaca
aacagcgccacgagtatatttgctggctttgtcatcttctctgtcatcggtttcatggct
catgagctgaaggtgccaatagagaaggtggcagacgagggtccaggcatagcatttgtt
gtgtatcccgaggctctgaccagactccccctgtctcctttctgggcaatcatcttcttc
ctgatgcttctgactcttggactggataccatgtttgccaccattgagaccattgtaacg
tctgtgtcggatgagttccccaagtacttgaggaaacacaaaccggtcttcacactggtc
tgctgcgcctcctttttcatcctgggttttcctatgatcacagagaatgggatgtacatg
ctgcagctggtggacacgtttgctgcctcctattctttggtcatcattgctatctttgag
cttttggggatttcttatctctatggtctgcagaggttttgtgcggacatcgaaatgatg
attggttttcagcccaaccgattctggagaatctgctgggcctttgtgactccaaccatt
ctgacgggcatcctgggactcagtctgtatcagtggaaggtcatgacttatgaagactac
acctaccccacctggtccatgatcctggggtggctgatggtcatctgctctgtgatctgg
atccccatcatgttcctcatcaagatgtacctggcaccaggctccgtaagcgagcgcttg
aagttggtctgttcccctcagcctgattggggtcctttcttgatgaagcacagaggggat
cgctacaagaacatgatcgatcctcttggaaccaactctctgggtctcaagctgccccca
aaggacttccatcttggttcctaccagtag
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