Oryzias melastigma (Indian medaka): 112161074
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Entry
112161074 CDS
T07439
Symbol
kars1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112161074 (kars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oml01007
]
112161074 (kars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oml03016
]
112161074 (kars1)
Enzymes [BR:
oml01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
112161074 (kars1)
Amino acid related enzymes [BR:
oml01007
]
Aminoacyl-tRNA synthetase
Class II (A)
112161074 (kars1)
Transfer RNA biogenesis [BR:
oml03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
112161074 (kars1)
Prokaryotic type
Other AARSs
112161074 (kars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF374
Motif
Other DBs
NCBI-GeneID:
112161074
NCBI-ProteinID:
XP_024151825
Ensembl:
ENSOMEG00000001710
LinkDB
All DBs
Position
LG3:17787868..17795494
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AA seq
611 aa
AA seq
DB search
MLSLVRVARLQVCQAFGVRGQWLKCPPPYTAAVSSQFLGNRWKGDKSELKRRMKAEKKAA
EKEAKVKEHEETKKESNDQGAQNACGLDEETLDPNQYYKIRTQAIQELKGTAEDPYPHKY
HVDLSLTEFIEKYNHLQPGDQLTNVVLNLSGRIHAKRASGAKLLFYDLRGEGVKLQVMAN
SRNYKSEEAFAAINHKLRRGDIIGVRGNPGKTKKGELSIIPIEMTLLSPCLHMLPHLHYG
LKDKETRFRQRYLDLILNDFVRQKFIIRAKIITYLRSFLDQMGFLEIETPMMNIIPGGAV
ARPFITHHNELDMKLYMRVAPELYHKMLVVGGIDRVYEVGRQFRNEGIDLTHNPEFTTCE
FYMAYADYSDLMEITEKLLSGMVKHITGGYKVTYHPDGPEGQAYEIDFTPPFRRVSMTHD
LEKVMGVKFPPTDSYDSDETRKFFDDLCVQKGVECPPPRTTARLLDKLVGDFLEVTCINP
TFIIDHPQIMSPLAKWHRSKKGLTERFELFVMKKEICNAYTELNDPIRQRELFEQQAKAK
AEGDDEAMFIDETFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPDDNK
PTAPQESSPAL
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctctggtcagggtagccagactgcaggtgtgccaggcctttggggtcagggga
cagtggttaaaatgtcccccgccatatactgctgcagtctcatctcagtttcttgggaat
cgttggaaaggtgacaaaagtgagctgaagaggcgaatgaaagcagagaagaaggcggcc
gagaaagaagccaaagtcaaagagcatgaggaaaccaagaaggaatccaatgatcaggga
gctcaaaatgcttgtgggttggatgaagaaacacttgaccccaatcaatactacaagatc
cgtacccaggccatacaggagctgaagggaacagcagaagacccatacccacacaagtac
catgtagacttgtctcttacggagttcattgaaaaatacaatcatttacagcctggagac
cagctcaccaatgtagtcctcaacctgtcaggtcgcatccatgccaagagggcttctggt
gccaagctgcttttctatgatttacggggggaaggcgtcaagctgcaagtcatggcaaac
tcgaggaactacaagtccgaggaggcctttgcagccatcaaccacaaattgcggcgtggt
gacatcattggcgttcgtggaaacccaggcaagacaaagaaaggggagcttagcatcatt
cctattgagatgaccctgttgtcgccatgtttgcacatgttgccccacctccactatggc
ctcaaagacaaggaaacgaggttccgccagcgctacctggatctgatcctcaatgacttt
gtgagacagaagtttattattcgcgccaaaatcatcacatacctgcgcagctttctggac
cagatgggatttttggagatcgaaacaccaatgatgaacattattccgggcggagcggtg
gcccgacctttcatcacgcaccacaacgagctggacatgaaactctacatgagggtcgcc
cctgagctctaccataagatgcttgtggttggtggaatagacagagtgtatgaagttggt
cgtcagttcaggaatgaaggcattgacctgacgcataatccagagttcaccacctgcgaa
ttctacatggcgtatgcggactacagtgatttgatggagatcacagaaaaactgctatca
ggaatggtgaagcacatcactggggggtacaaggtgacctatcaccctgacggtccagag
ggacaagcctacgagattgacttcactccaccgttcaggagagtcagcatgacgcacgac
ttggagaaagtcatgggggtgaaattccctccgactgacagctatgactctgatgagact
cgtaagttctttgatgacctgtgtgtccaaaaaggagttgaatgtcctccaccaagaacc
actgcccgccttctggacaagttggttggagatttccttgaggtcacatgtatcaaccca
acattcatcattgaccatccacaaatcatgagccctctggcaaaatggcacagatccaag
aaaggtctaacagagcgctttgagctctttgtgatgaagaaggaaatctgcaacgcctat
acggagttgaatgaccccattagacagcgggagctttttgagcagcaagccaaggccaaa
gctgaaggcgatgacgaagccatgttcattgatgaaaccttctgcactgcactggaatac
ggtctgccgcctactgcaggctgggggatgggcatcgaccgcctcaccatgttcctcacc
gactccaataacatcaaggaggtattgttgtttccagccatgaagcctgatgataataag
ccaacagccccccaagagagttcccctgccttgtaa
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