Oryzias melastigma (Indian medaka): 112161109
Help
Entry
112161109 CDS
T07439
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112161109 (lingo1b)
Membrane trafficking [BR:
oml04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
112161109 (lingo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRR_Zer-1
V-set
LRRNT
LRR_LRWD1
LRR_6
Motif
Other DBs
NCBI-GeneID:
112161109
NCBI-ProteinID:
XP_024151885
Ensembl:
ENSOMEG00000004809
UniProt:
A0A3B3BFS0
LinkDB
All DBs
Position
LG3:3114575..3147202
Genome browser
AA seq
623 aa
AA seq
DB search
MTVLASRRMVFGETGGHSYLVACWQPILILMLGTVLSGSTTGCPSRCECNGQERSVVCHR
RRLAALPEGIPTETRLLDLSKNRLKTLGPEEFINYPLLEELQLNENTISAVEPGAFSNLM
NLRTLGLRNNQLKLIQLGVFTGLVNLTQLDISENKIVILLDYMFQELYNLRALEVGDNDL
VFISPRSFHGLSNLESLNIEGHKLSSVPTDALSHLHNLLSLRLRYLNVTVIRDYSFKRLY
RLRVLEIADMPTLDTMTPKCLFGLNLTTLAITNCNLSTIPYQAMNHLRHLRFLNLSFNPI
QTVEGNKMFNLQKLQAFYLAGGKLVAIEPYSFKGLNHLRVFNVSNNSLSTLEESVFHSVG
NLETLALYDNPLACDCRLLWVFRRRWRLNFNKQQPICASPPIVEGKEFKDFPDTLPPDYF
VCQKSKIVDYLVQESHVDEGTTVIFGCKAEGNPVPTIIWVTPKKEYITTKTLGTRLSVSS
DGSLEVRYAQIQDNGTYFCIASNAAGNDTKAAHLFVHSYSPNWPHQPNKTFAFISNQPSD
EGANVTRATVQFPFDVKTLIIATTMGFISFLGVVLFCLVILFLWSRGKDNTKSSIEVEYV
PRKEETEETSPTEAQVQFNMKIM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcctggcaagcagaaggatggtgtttggggagacaggtgggcacagctacttg
gtggcatgctggcagcccatcctgatccttatgctgggcaccgtcctttctggctccacc
accggctgcccttcccgatgtgaatgcaacggtcaagagcgttccgtcgtgtgtcatcga
cggagactggcagctctgcctgagggtattccaactgaaacgaggctattagacctcagc
aagaaccgtctaaagaccctggggcctgaggagttcattaactatcctctgttggaggaa
ctgcaactcaacgagaacacaatttcggccgtcgagccaggggcgtttagcaacctcatg
aaccttcggacccttggtctccgcaacaaccagctaaagcttattcaactgggggtgttc
acaggcttggtcaacctcacacagttggatataagtgagaataaaattgtcattctgcta
gactatatgttccaagagctatacaacctgagggctttggaagttggtgacaatgacctt
gtcttcatctcacctcgatcatttcatggcctgagcaaccttgaaagcctaaatattgag
ggacacaaattgtcctcagtgcccaccgatgcccttagccatctgcataatctgttgtca
cttcgattacgttatctcaatgtaactgtcataagagattactctttcaagaggctctat
agactaagagtgctggagatcgctgacatgccgaccctggataccatgacaccgaaatgc
ttgtttgggttaaatctcacaacactggccattacaaattgtaatcttagcaccatccca
tatcaagccatgaatcacctgagacatcttcgttttctgaatttgtctttcaaccccatt
cagacagtggaagggaacaaaatgtttaacttacagaaactccaggctttttatttggct
ggtggaaaattggtggctattgagccttactctttcaaaggactcaaccatctccgtgtg
ttcaacgtatcaaacaatagcttgagcactcttgaagagtctgtttttcattccgttgga
aacctggagacccttgctctgtacgacaaccctctggcttgtgactgccgtcttctctgg
gtcttccgccgccggtggaggctcaacttcaacaaacaacagccaatatgtgcttcacct
cctattgttgaaggaaaagagttcaaagattttccagatacactccctcccgactacttt
gtctgccaaaagtcaaagattgtggattacctggttcaagaaagtcatgtagatgaagga
actacagttatttttggttgtaaggctgagggaaatccagttcccaccataatttgggtt
actccaaaaaaggaatatatcaccaccaagacccttgggacaagactttccgtgtcaagt
gacggttcgctggaggtacgctacgcccaaatccaagacaatggcacctacttttgcatt
gcaagtaatgcagccggcaatgacaccaaagctgcacacctttttgtgcatagctactcc
ccgaactggcctcaccaaccaaacaagacatttgcgttcatttccaaccagccaagtgat
gaaggtgctaatgtgacccgggccacggttcagtttccattcgatgtaaaaacactaatc
attgcgaccaccatgggatttatttctttccttggagtggtacttttctgtctggtaatc
ctattcctctggagtagggggaaagacaacaccaagtcaagtattgaggttgagtatgtg
ccgcgtaaggaggaaaccgaggagaccagtccaactgaggcacaagtacagttcaacatg
aaaatcatgtga
DBGET
integrated database retrieval system
