KEGG   Oryzias melastigma (Indian medaka): 112161127
Entry
112161127         CDS       T07439                                 
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
  KO
K08112  glypican 6
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:oml00535]
    112161127 (gpc6a)
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:oml00537]
    112161127 (gpc6a)
Proteoglycans [BR:oml00535]
 Cell surface proteoglycans
  Glypican family (GPI-anchored HSPG)
   112161127 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:oml00537]
 Others
  112161127 (gpc6a)
SSDB
Motif
Pfam: Glypican Put_Phosphatase ATP-synt_D SpoIVA_C
Other DBs
NCBI-GeneID: 112161127
NCBI-ProteinID: XP_024151915
Ensembl: ENSOMEG00000017020
LinkDB
Position
LG3:complement(14195526..14354751)
AA seq 568 aa
MNAMWRLQVAFCTVSVLSLSSAGESKARSCSEVRQAYKAKGFSLLNVPLQEISGEHLRVC
PQGYTCCTSEMEEKLNQQSKLEFESMVEESSRQMRTTFISRHKKFDEFFLELLDNSEKSL
NSMFTRTYGKLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWSRLLERMFQLLNSQY
HFTDDYLECIGKIADVLKPFGDVPRRLKVQVTKAFIAARTFVQGLMVGREVANRVAKVNV
APACVRALTKMLYCPYCRGMAGLKPCHNYCHNVMRGCLANQADLDSEWNLFIDAMLLVAN
RLEGPDNIEAVIDPVDIKISEAIITMQENSMQVSAKVFQECGQPKPSGLSRSTRGIDILS
SRFRPYTPEQRPTSAAGTSLERMRVVWRTMQQSVNEIKERLEESKRFWSKLPDDICSEEL
TQPDEEQCWNSHTKGRYFPEVVKEGLTNQINNPEVDVDITRPDTLIRQQIMALRVMTNKL
KNAYNGNDIYFQDSSDEGSSSGSGSGCTDSCTTELIFVGTEAPVIGTDRSDERAAAAAAG
KSLSRGPSTLLVMSALTLLLWATQTQLR
NT seq 1707 nt   +upstreamnt  +downstreamnt
atgaatgcgatgtggagactgcaggtcgccttctgtactgtgtcggtgctttccctgtca
tctgccggagaaagcaaagcgcggagctgcagcgaggttagacaggcgtacaaggcgaag
ggcttcagcctcctcaatgtacctcttcaggaaatatcaggtgagcaccttcgtgtctgt
cctcagggatacacctgctgcacttctgagatggaagaaaagctcaaccagcagagcaaa
ctggagtttgagagcatggttgaggagagcagccgtcaaatgagaacaacgtttatctct
aggcataaaaagtttgatgagttcttcctggagctactggacaactctgagaaatcactg
aacagtatgttcaccaggacgtacgggaagctatatatgcagaactctgaggtgtttcag
gacctgttcactgagctaaagcgctactacactggaggcaacgtcaacctggaggagatg
ttgaatgacttctggtccaggctgctggaacgtatgtttcagctgctcaactcgcagtac
cacttcacagacgactacctggagtgcatcggtaaaatcgcagatgtgctcaagcctttt
ggagatgtgcccaggagactgaaggttcaggtcacaaaggctttcattgctgcacggacg
tttgtccaggggctaatggtgggtcgggaggtggccaacagggttgctaaggtgaacgtg
gctccggcgtgtgtcagggccttgaccaagatgttgtactgcccgtactgccgcggcatg
gccggcctgaagccctgtcacaactactgtcacaacgttatgaggggctgtctagcaaac
caagcagacctcgattccgaatggaaccttttcatcgatgccatgttgctggttgccaac
agactggaggggcccgacaacattgaagctgtgatagatcctgttgacatcaagatctct
gaggccatcataactatgcaggaaaacagcatgcaagtgtcagcaaaggtttttcaagaa
tgtggccaacctaaaccatcaggactgagcagatccacacgaggcatcgacatcttgagc
agccgctttaggccctacacccctgaacagagaccaacctcagcggctggaacgagcttg
gagagaatgagggttgtctggaggacaatgcaacaaagtgtgaatgaaatcaaagaaaga
ttggaggagtccaagaggttctggtccaaattgccagatgacatctgttcggaagaactc
acacagcctgacgaggagcagtgctggaacagccacacgaagggcagatattttcctgaa
gtggtgaaggagggtctaaccaaccagataaacaaccccgaggtggatgtagatatcacc
agacctgacacgctgattcggcaacagatcatggctctccgtgtcatgaccaacaagctg
aagaatgcctacaatggaaatgacatttatttccaagactccagtgacgagggcagcagc
tccggcagtggcagtgggtgcactgatagctgcaccacagagttaatttttgttggaaca
gaagctcctgtgattggaactgacagaagcgacgaacgcgctgcagccgccgctgcaggc
aagtctctttctcgcggaccctccacactgctggtgatgtctgccctgactctcctactc
tgggcgacgcagactcaattgagataa

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