Oryzias melastigma (Indian medaka): 112161127
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Entry
112161127 CDS
T07439
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
KO
K08112
glypican 6
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oml00535
]
112161127 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oml00537
]
112161127 (gpc6a)
Proteoglycans [BR:
oml00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
112161127 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oml00537
]
Others
112161127 (gpc6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Put_Phosphatase
ATP-synt_D
SpoIVA_C
Motif
Other DBs
NCBI-GeneID:
112161127
NCBI-ProteinID:
XP_024151915
Ensembl:
ENSOMEG00000017020
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Position
LG3:complement(14195526..14354751)
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AA seq
568 aa
AA seq
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MNAMWRLQVAFCTVSVLSLSSAGESKARSCSEVRQAYKAKGFSLLNVPLQEISGEHLRVC
PQGYTCCTSEMEEKLNQQSKLEFESMVEESSRQMRTTFISRHKKFDEFFLELLDNSEKSL
NSMFTRTYGKLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWSRLLERMFQLLNSQY
HFTDDYLECIGKIADVLKPFGDVPRRLKVQVTKAFIAARTFVQGLMVGREVANRVAKVNV
APACVRALTKMLYCPYCRGMAGLKPCHNYCHNVMRGCLANQADLDSEWNLFIDAMLLVAN
RLEGPDNIEAVIDPVDIKISEAIITMQENSMQVSAKVFQECGQPKPSGLSRSTRGIDILS
SRFRPYTPEQRPTSAAGTSLERMRVVWRTMQQSVNEIKERLEESKRFWSKLPDDICSEEL
TQPDEEQCWNSHTKGRYFPEVVKEGLTNQINNPEVDVDITRPDTLIRQQIMALRVMTNKL
KNAYNGNDIYFQDSSDEGSSSGSGSGCTDSCTTELIFVGTEAPVIGTDRSDERAAAAAAG
KSLSRGPSTLLVMSALTLLLWATQTQLR
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgatgtggagactgcaggtcgccttctgtactgtgtcggtgctttccctgtca
tctgccggagaaagcaaagcgcggagctgcagcgaggttagacaggcgtacaaggcgaag
ggcttcagcctcctcaatgtacctcttcaggaaatatcaggtgagcaccttcgtgtctgt
cctcagggatacacctgctgcacttctgagatggaagaaaagctcaaccagcagagcaaa
ctggagtttgagagcatggttgaggagagcagccgtcaaatgagaacaacgtttatctct
aggcataaaaagtttgatgagttcttcctggagctactggacaactctgagaaatcactg
aacagtatgttcaccaggacgtacgggaagctatatatgcagaactctgaggtgtttcag
gacctgttcactgagctaaagcgctactacactggaggcaacgtcaacctggaggagatg
ttgaatgacttctggtccaggctgctggaacgtatgtttcagctgctcaactcgcagtac
cacttcacagacgactacctggagtgcatcggtaaaatcgcagatgtgctcaagcctttt
ggagatgtgcccaggagactgaaggttcaggtcacaaaggctttcattgctgcacggacg
tttgtccaggggctaatggtgggtcgggaggtggccaacagggttgctaaggtgaacgtg
gctccggcgtgtgtcagggccttgaccaagatgttgtactgcccgtactgccgcggcatg
gccggcctgaagccctgtcacaactactgtcacaacgttatgaggggctgtctagcaaac
caagcagacctcgattccgaatggaaccttttcatcgatgccatgttgctggttgccaac
agactggaggggcccgacaacattgaagctgtgatagatcctgttgacatcaagatctct
gaggccatcataactatgcaggaaaacagcatgcaagtgtcagcaaaggtttttcaagaa
tgtggccaacctaaaccatcaggactgagcagatccacacgaggcatcgacatcttgagc
agccgctttaggccctacacccctgaacagagaccaacctcagcggctggaacgagcttg
gagagaatgagggttgtctggaggacaatgcaacaaagtgtgaatgaaatcaaagaaaga
ttggaggagtccaagaggttctggtccaaattgccagatgacatctgttcggaagaactc
acacagcctgacgaggagcagtgctggaacagccacacgaagggcagatattttcctgaa
gtggtgaaggagggtctaaccaaccagataaacaaccccgaggtggatgtagatatcacc
agacctgacacgctgattcggcaacagatcatggctctccgtgtcatgaccaacaagctg
aagaatgcctacaatggaaatgacatttatttccaagactccagtgacgagggcagcagc
tccggcagtggcagtgggtgcactgatagctgcaccacagagttaatttttgttggaaca
gaagctcctgtgattggaactgacagaagcgacgaacgcgctgcagccgccgctgcaggc
aagtctctttctcgcggaccctccacactgctggtgatgtctgccctgactctcctactc
tgggcgacgcagactcaattgagataa
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