Oryzias melastigma (Indian medaka): 112161149
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Entry
112161149 CDS
T07439
Name
(RefSeq) semaphorin-7A isoform X1
KO
K06529
semaphorin 7
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oml04090
]
112161149
CD molecules [BR:
oml04090
]
Proteins
112161149
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
Ig_SEMA-3_4_7A
PSI
Ig_Sema4F
Ig_2
DUF769
Ig_3
DUF7270
Motif
Other DBs
NCBI-GeneID:
112161149
NCBI-ProteinID:
XP_024151945
Ensembl:
ENSOMEG00000018829
UniProt:
A0A3B3DSF6
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Position
LG3:complement(30220167..30234155)
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AA seq
622 aa
AA seq
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MACLFCLYLSLFCAVSLSEADSKSLPRMVFKETESFIKRFPLTGHDKPVKIIAETQPDTI
TSVGQTHLMIFNFKNSEKIVAEQKVVWEDCSDKGCRYNITVANQRNGGGSAFVCGSSHEE
TNCCEMDITANPLEARCSPSQELQHIKQSIKGFVTKEGEHSIFVKSGNNASLSLYMTSSG
NGENVGIYRFGKQKLAPHSHSNEQHFVGLMLSKRENSLQDRIYTFYKQKNKDTALDSDKW
IPFVSQVCTADIGGRKNLLQNKWTSMMNARLFCGDPERKQYFSELLDVNIVDADRWEETK
VYALFRNEWGVSAVCMYTVADIHKVFMKSPFKEPQTKRQPDRPRECVLESSKISTAILNN
IKEVSEMEEWVKPVKNHLPLLVHRHNYTGIHVDASQHSSNTVIFLSLANGGIHKVLQSEK
DTFLISEYRPFHHHAHISSFFLHTPTRKLYVTSHREVVEVDVVNCERYGNSCEDCILSRD
PYCSWSNNQCAEKRSFQQDMIRGNQGGCPQSRFHSTGENSPIVLPSGSRYFLRCPVSSLH
AEYVWKTPSSSKSCSPKEDECLLLIESMSSLQDGGYECTSEEQGYRKVVAQYQLMSTAPG
RTAPSGFTWVCVAAALMGRFSW
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgtttattctgtctatatttatcattattctgcgccgtcagtttatctgaggct
gactccaagtctttacccaggatggtgttcaaagaaacagagtcctttattaaaaggttt
cctctgactggacatgataaaccagtgaagatcatcgcagaaacacaacctgacaccatc
acatctgtaggacaaacacacctgatgattttcaacttcaagaactctgagaagattgtt
gctgaacagaaggtggtttgggaggattgctcagacaaaggatgcagatacaacatcact
gtggctaaccagaggaacggaggaggatccgcatttgtgtgtggaagcagtcatgaggaa
accaactgctgtgaaatggatataacagcaaatcctctagaagcccgatgttctccctct
caggaactccaacatattaaacaaagtattaaaggatttgtcacaaaggaaggagaacat
tccatctttgtcaagtctggaaataacgcttcgttaagtctttacatgacctcctctgga
aatggcgagaacgtcgggatttaccgctttgggaaacagaagcttgcacctcacagtcac
agcaacgaacagcattttgtgggtctgatgctcagcaagagagagaattcccttcaggac
agaatttacactttctacaagcagaaaaacaaagacacagcactggacagtgataagtgg
atcccctttgtgagccaggtttgcacggctgacattgggggccgtaagaacctactgcag
aataagtggacctccatgatgaacgctcggctgttctgtggagatccagagagaaaacag
tatttctctgagctgctggatgtgaacattgtggatgcagaccgatgggaggaaaccaaa
gtctatgctctcttcaggaatgaatggggtgtgagcgccgtctgcatgtacacagtagca
gacattcataaagtcttcatgaaatccccttttaaagaacctcaaacaaaacgccaaccg
gacaggcctcgggagtgtgttctggagagttccaagatttctacagcgatcttaaacaac
attaaggaggtgtcagagatggaggaatgggtgaagcctgtgaaaaaccatctcccactt
ctggttcatcgtcacaattacactgggatccacgtggacgcttctcagcacagcagcaac
actgttattttcctgtctttagctaacggtgggattcacaaggtgcttcagagtgaaaaa
gacacctttctcatttctgagtaccgacccttccaccatcacgcccacattagcagcttc
ttcctccacacccccacaagaaagctgtatgtgacgtcacacagagaagtggttgaagtt
gatgtggtgaactgtgagcggtatggaaacagctgtgaggactgcatcctctccagagac
ccttactgcagctggagcaacaaccagtgcgcagagaaacgaagctttcaacaggatatg
atcagaggaaaccagggtggatgcccacaatctcgcttccactcaacaggggaaaacagc
ccgatcgtccttccctctggatccagatatttcctgcgttgtcccgtgtcttccctccat
gccgagtacgtctggaagacccccagctcctcaaagtcctgcagcccaaaggaggacgag
tgtctgcttctgattgaaagcatgagctccctgcaggacggaggttatgaatgcacgtca
gaggagcagggctacaggaaagtggtggcacagtaccagctgatgagcacggcgccgggc
cggacagcgccgtctgggttcacgtgggtctgtgtggctgctgcactgatggggaggttc
agctggtaa
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