Oryzias melastigma (Indian medaka): 112161216
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Entry
112161216 CDS
T07439
Symbol
pole3
Name
(RefSeq) DNA polymerase epsilon subunit 3
KO
K02326
DNA polymerase epsilon subunit 3 [EC:
2.7.7.7
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03030
DNA replication
oml03082
ATP-dependent chromatin remodeling
oml03410
Base excision repair
oml03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112161216 (pole3)
03410 Base excision repair
112161216 (pole3)
03420 Nucleotide excision repair
112161216 (pole3)
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112161216 (pole3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oml03032
]
112161216 (pole3)
03036 Chromosome and associated proteins [BR:
oml03036
]
112161216 (pole3)
03400 DNA repair and recombination proteins [BR:
oml03400
]
112161216 (pole3)
Enzymes [BR:
oml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
112161216 (pole3)
DNA replication proteins [BR:
oml03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
112161216 (pole3)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
112161216 (pole3)
DNA repair and recombination proteins [BR:
oml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
112161216 (pole3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-T_C
dCMP_cyt_deam_2
Afi1
DUF4746
CIS_TMP
RNA_pol_3_Rpc31
Bromo_TP
ECM10
Motif
Other DBs
NCBI-GeneID:
112161216
NCBI-ProteinID:
XP_024152039
Ensembl:
ENSOMEG00000003317
UniProt:
A0A3B3BA00
LinkDB
All DBs
Position
LG3:complement(6665201..6669863)
Genome browser
AA seq
147 aa
AA seq
DB search
MAEKPEDLNLPNAVITRIIKEALPDGVNVSKEARRAISQAASVFVLYATSCANNFALKAK
RKTLNAGDVMAAMEEMEFERFLEPLRAALEVYKKGQKGKKEVSEQKRKEKKQADGEHEKN
KEDEEGEDEEEQRMEEEPEEGEEEVEN
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaaccggaggacctgaaccttcctaacgcggtcatcacgcgcatcatcaag
gaggcgcttccagatggggtgaacgtgtccaaagaggcgcgcagagccatttcccaggct
gccagtgtctttgtgctgtatgcaacctcctgcgccaataattttgcactgaaggccaaa
cggaagactttaaatgctggggatgttatggcagcgatggaggagatggagtttgagcgc
ttcctggagcctctcagagcagctctagaagtgtacaagaaaggacagaaaggaaagaag
gaagtatctgagcagaaacgcaaagaaaaaaagcaggcagacggtgagcatgaaaagaac
aaggaagatgaggagggagaggatgaggaagaacaacgtatggaagaggagcccgaggag
ggcgaagaggaggtggagaactga
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integrated database retrieval system