KEGG   Oryzias melastigma (Indian medaka): 112161250
Entry
112161250         CDS       T07439                                 
Symbol
tp53bp1
Name
(RefSeq) TP53-binding protein 1 isoform X1
  KO
K20915  tumor suppressor p53-binding protein 1
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:oml00001]
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    112161250 (tp53bp1)
SSDB
Motif
Pfam: 53-BP1_Tudor BRCT_3 BRCT_2 Tudor_5 RTT107_BRCT_5 Tudor_3 DUF4537 SH3_Hsr9 Tudor_2
Other DBs
NCBI-GeneID: 112161250
NCBI-ProteinID: XP_024152076
Ensembl: ENSOMEG00000002725
UniProt: A0A3B3B8C2
LinkDB
Position
LG3:complement(7631114..7663510)
AA seq 1505 aa
MDPSGSDLDSSLPQPENPCLIVEDSQPDSVALEDDPESSYRALLARRLSILQPASRSPVL
ELISSPLGSRSSQTDSQPASDTDAQSAPQEHRGAVGGHPVQNSRGCADMDSGADSTTNCI
QSEGESCPLGFLELSQSQDLQAEEVLVCPSHTDKPRSSVEQTVGAQSQSAAAPRSEVSSS
SSSGSVWQPTLQVPAHSQNTSGCAEPDRQDQEVLSSQEDLFDGDKTGGAVDSTVSDSDHQ
SQPSLTPAHTLRLLHLSGQGPLVQDSLSQSSVDYVAPTPDNFPNTPLIVPSSPTEPEAQN
GAADAMDTSKPHPSASTPVSQSPAGFAFERLLPVPSQPEFSHDVFVPTQSPKPSQPREES
LSSGPPLDPAPFSSLQLSESCSRQDRSPEEDSQATQIEALEEAPGRDVGSCRTASSDPSG
ERGAAPSQSQEDGRSGMVLDRKPPSEATPSSLPSQSIISQPAVADSRGGTAVSPSEEAHQ
HGAETDKEGGVGCEEEEVEEEHAGGASGLALVLSQSQLLSPEPMEEEGVGERPPDRENGH
PPISCSHPHKEGLQAPEGTSQTEMSGSEAQSLANKSLSDSSGDISFHFTLPKDGELAGPP
ASATPPLVNQLRQTLRHSTPIETASFSEKLDVPADMAGADSPSVDEDRKLSLRMKLVTPV
EEGSSERFSLQKPASSEEDAAVVKVTTVSMAAPSSPSVFTRVRQVHRQQEAGGGSQPVSN
TTNVEEGLLASPKRSSQTPSRGCHSLPNSQSELSQQGGLAAPQGSLKPAVKPPEEQRGAP
EAPRPGAAEPQKLVFLQAANSTATSTPSKGDPGSPSLRRAAGPTHRRHVRTIQEVRTTIT
RIITDVYYEDGREVDRRVTEESEEPVVDCQVLEEVSPCRTGSSVTLGDLADISSLSSKAS
SSSTAPPRPDFIIPPSRGARSMSPRRGGGHLQRGHRGNRVGSVASPGRSFNTSGSRSFLP
VTPRGRARRGRPPSRSSMSRGGAVGSLQRPIAQGHTPSSSEEEPYALTGPPLLPVSPTDP
KPPSRSDSLRSSPEAASSAGSSFVGLRVVAKWSSNGYFYSGRIMKDAGEGRFRLRFDDGY
ECEVAGRDILLCDPIPLETEVTALLEDEYFSVGVVKGHRAEGSELFYSVERDGQRHWYNR
TAVILSLDQGNRLREQHSLGPYEPSTPLTKASDISLDNLVEGKRRRRGTPGGAHTPNRSS
SSSPRTPGPSGKRKLMTSDENRTPSKRGRRGGGYRAAQRLAVCNTSGSGTELPGQPGDPA
ETHGPLPQSTSLFMGFAFMLTASSETDRLTNWLSTEDEDDYVQTGPYNKAYTESQLQAGG
GFILPDFNEEQCQAAYQSLLIADQHCRTRKYLLCVSSGVPCVSHIWVRDCCRENKLLNYR
NYLLPAGAGPDGAIVEWHPRCSPFKALHVLLLSQQPQELWAQLATMGGASSVRQLQVDDS
SDIPAGKFDVAVTDHSCPPQLRTRVTSQEVPIVSPEWLIQSLICGERMDFQRGWEGSSSP
CSSSS
NT seq 4518 nt   +upstreamnt  +downstreamnt
atggatcccagtggcagcgacctggactccagcctgccgcagccggaaaacccgtgcctg
atcgtggaggactctcagccggacagcgtcgctctggaggatgacccggagagcagctac
cgagccctgctggcccgccgcctgtccatcctgcagcccgcctcccgcagccccgtgctg
gagctgatctcctccccactgggcagcagaagctcccagaccgacagccagcctgcatcc
gacaccgacgcacagtccgccccgcaggagcaccgtggcgctgtcggcggccatccggtg
cagaacagcagagggtgtgcagacatggattctggagctgattccacaacaaactgcatt
cagtctgaaggggaatcttgtccactggggtttctggagctctctcagagtcaggatctc
caggctgaggaagtcttagtttgtccctcccacaccgacaagcccaggagctcagtggag
cagactgttggtgcacagagccagagcgccgcggcgccaaggtctgaggtaagctccagc
agctcctcagggtccgtctggcagcccaccctccaggtcccggcacactcccagaacacg
tcaggctgcgccgagccggaccggcaggaccaggaggtcctgtcgtcacaggaagatctg
tttgatggagacaagacgggtggtgcagtggacagcaccgtgtcggactcggatcatcag
agccagccctccttgaccccggcccacaccctgcgactgctccatctgtctggtcagggc
cctctggtgcaggacagcctgtcccagagctctgtggattatgtggcccccactccagac
aacttccccaacactcctctgatagttcccagctcaccaactgagccggaagcccagaac
ggtgctgcagatgccatggacacctctaagccacacccctctgcctccacgcccgtgtcc
cagagcccggctggctttgcgtttgagcgcctcctgcccgtgccctcccagcctgagttc
tcccacgacgtgttcgtcccgacgcagagcccgaagccctctcagcctcgggaggagtcg
ctgtcttctggtccacctttggacccggcaccgttttcctccctgcagctctctgagagc
tgcagccggcaggaccgcagcccagaggaggacagtcaggccacacagatcgaggcgctg
gaggaggcgcccggcagagacgtaggctcctgcaggacagcgagctctgatccaagtgga
gaacggggcgctgctccttcacagtcacaggaggatggacgaagcgggatggtactggac
aggaagcccccctctgaggccacgcccagcagcctgccctcacagtccatcatctcccag
cccgccgtggccgactccagaggaggaacagccgtgagtccgtctgaagaagcacatcag
cacggggcagagacagacaaggaggggggggtgggatgtgaagaagaggaggtggaagag
gagcatgcaggaggcgcctctggcctggctctggtcctgtcccagagccagctgctgtcc
cctgaacccatggaggaggaaggggttggagagaggcctccggacagagagaacggacac
ccccctatctcctgcagccacccccacaaagaggggctccaggctccagaggggacgtcc
cagacagagatgtcggggagtgaagctcagagcctggcgaacaaaagtctgagcgacagc
tcgggagacatttcctttcacttcactcttcctaaagacggagagctggcaggccccccc
gccagcgccacgccgcctctggtcaaccagctgaggcagacgctcagacacagcaccccc
attgaaaccgcctccttctctgaaaagctggacgtgcccgcggacatggcgggggccgac
tccccctcagtggacgaggacaggaagctgagtctgaggatgaagctggtgacgccggtg
gaggagggcagctccgagcgcttcagcctgcagaagccggcctcgtctgaggaggacgca
gctgtggtcaaggtcaccaccgtttccatggcagcccccagcagtccgtctgtgttcacg
cgagtgcggcaggtgcaccggcagcaggaggcaggagggggcagtcagcctgtgagcaac
accaccaatgtcgaggaggggctgttggcttcccctaagaggagctcccagacgccttca
cgtggatgccacagcctgccaaacagccagtcggagctctcgcagcagggggggctggcg
gcgccgcaggggagcctcaaacctgccgtcaagccgcctgaggagcagagaggggcccct
gaggccccccgcccgggtgcagcagaaccacaaaaactggtcttcctgcaggcggccaac
agcacggccacctccaccccttccaagggagatccggggtctccgtcgctcaggagagcc
gccggcccgactcaccgcagacatgtgcgcaccatccaggaggtgcgcaccaccatcacg
cgcatcatcacagacgtgtactatgaggacggcagggaagtggatcgcagggtcacggag
gagagtgaggagcctgtggtggactgtcaggtcctggaggaggtttctccatgccgcact
ggcagctccgtcaccttaggggacctcgctgacatcagctccctgtcctccaaggcctcc
agcagcagcaccgccccccccaggccagacttcattatcccacccagcagaggagccagg
tccatgagtcccaggaggggaggtgggcatttacagaggggtcacaggggtaacagggtg
gggtcagtggcctccccgggtagaagcttcaatacttcagggtcccggtccttcctcccc
gtgacccctaggggtagggctagaaggggccgtcccccatcccgctcctccatgtccaga
gggggggctgttggctcgctgcagaggcccatcgctcaaggacacacaccgtcctcttca
gaggaggaaccctacgccctcaccgggcccccgctcctccccgtcagccccacagacccc
aaaccccccagccgctcagattccctccggtcctccccagaagcggcgagttcggccggc
agcagcttcgtgggtctgcgcgtcgtcgccaagtggtcctccaacggctacttctactcg
ggccgcatcatgaaggacgctggggaggggcggtttcgcctgcgcttcgatgacggttat
gagtgcgaggtggcggggagggacatccttctgtgtgaccccatcccgttggagacggag
gtcacggctctgctggaagacgagtacttcagtgtaggagttgtgaagggccacagagct
gaaggctctgagctgttctacagcgtggagcgggacggccagaggcactggtacaaccgc
acggcggtcatcctgtctctggaccaggggaaccggctgagggagcagcacagcctgggg
ccctacgaacccagcacccccctgaccaaagcctccgacatcagcctggataacctggtg
gaggggaagaggaggcgcagaggaaccccgggaggggcgcacacccccaaccgaagctcc
tcgagcagccctcggacccccggtccctccggcaagaggaagctgatgacttcagacgag
aaccggacaccctcaaagaggggacgcagagggggggggtatcgagcggctcagcggctc
gccgtctgcaacacttcaggcagcgggaccgaactcccgggtcagcccggtgacccggcg
gagacgcacggccccctgccccagagcacctccctcttcatgggctttgctttcatgctg
acggcctcatccgagaccgaccggctgaccaactggctctccaccgaggatgaggacgat
tacgtgcagacgggtccgtataacaaagcctacacggagtcccagctgcaagcggggggg
ggcttcattctccctgacttcaatgaggagcagtgccaggcggcgtaccagagcctgctg
atcgcagaccagcactgccgcaccaggaagtacctgctgtgcgtgtccagtggcgtgccg
tgtgtctctcacatctgggttcgggactgctgcagagaaaacaagctgctgaactatagg
aactacttgctgccagcgggggcggggcctgacggcgccatcgtggagtggcatccgcgc
tgcagccccttcaaggctctgcacgtcctgctgctgtctcagcagccgcaggagctgtgg
gcccagctggccaccatgggcggggcctcctcggtgcggcagctgcaggtggatgacagc
tcagacattcctgccgggaagttcgacgtcgcggtgacggatcacagctgtccgccgcag
ctgaggacaagagtgacatcacaggaagtgcccatagtatctcctgagtggctgattcag
agtctaatctgtggcgagcggatggattttcagcgcggctgggagggctcctcctccccg
tgctcctcctcctcctaa

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