Oryzias melastigma (Indian medaka): 112161271
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Entry
112161271 CDS
T07439
Symbol
clasp2
Name
(RefSeq) LOW QUALITY PROTEIN: CLIP-associating protein 2
KO
K16578
CLIP-associating protein 1/2
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112161271 (clasp2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112161271 (clasp2)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
112161271 (clasp2)
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
112161271 (clasp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EZ
Cnd1
HEAT_DAAF5
Arm
ParcG
TAN
Motif
Other DBs
NCBI-GeneID:
112161271
NCBI-ProteinID:
XP_024152109
LinkDB
All DBs
Position
LG11:16956364..17008668
Genome browser
AA seq
1553 aa
AA seq
DB search
MEEHDNMDYYYQQVVQKDVTRRLQVGQDLIDYLNDPQRSPDVEQDKPRLDKTIDELTGWV
NSSNFKVALLGIDICSAFVDRLGERFKGYLGTVLPALVDRLGDGKDQVRENSQALILRCM
EQTASPMYIWERLLPGFKHKNFRSREGICFCLSATLSTYGAQSLGLSKLVPHLCSLTGDQ
NPQVREAATTTLVDVYRHVGERVRADLGKRGLPAPRLQAIFARFDEALNSGNMALSPSHD
RSFDDNDSVDERSSSAQAAFKVPKVPKKPAESSAARRPSATGGKLVSKESAGAIDEEDFV
KAFTDVPTVQIYSARDLEDNLNKIREICSDDKHDWDQRASAMKKIRSLLVAGAASYDCFY
QHLRLLDGAFKLSAKDLRSQVVREACITVAHLSSVLGNKFDHGAEGIVPVLFNLIPNCAK
VMATSGVSAIRIIIRHTHVPRLIPLIASNCTSKSVAVRRXEAASCCDILNLIAERKWKTH
SLERHTAVLVESIKKGLHDADSEARVEARKAYWGLRNHFPAEADALYNSLETSYQRTLQS
CLKSSGSVASLPQSDRSSSSSQESLNRPLSSKWSAAPGRVPASSKGGVSLTSLQRSRSDV
DVNAAAVSKQRHVGQARGAGQQPARSYSSLDDASDKTDGRVRTKQLLSTASSVTSQVDSR
GRSRAKMVSQSQRSDESDCTPGSQSANPVGAGSRSGSPGRVLTTTALSTMSSGAHRVLPG
PQGDGHRRSRIPRSQGCSRDSSPTRLSVAPSSISSIYNGSRGARGSRIPRPSMSQGCSRD
ASRESSRDTSPVRSFTPLATRSYSRSTGALHTPDAFGAAGSGFGISQSSRLSSSVSAMRV
LNTGSDVEEALADALLLGDMRSKKKPARRRYENYSMYSDDDANSDASSACSERSYSSRNG
GAIPTYMRQTEDVAEVLNRCASANWSERKEGLLGLQALLKNQRTLSRVELKRLCEIFTRM
FADPHSKRDSGRVYGTAESGISSASFKRVFSMFLETLVDFIQVHKDDLQDWLFVLLTQLL
KKMGADLLGSVQAKVQRALDVTRESFPNDLQFTILMRFTVDQTQTPNLKVKVAILKYIET
LTLQMEAPDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQSVLIALFQLNTPEFTMLLAA
LPKTFQDGATKLLQNHLKNTGSVAQAPMGSPLTRHTPRSPASWSSPVTSPTNTSQNTPSP
SAFDYDTENMNSEDIYSSLKGVTEAIQNFSVRSQEDMNDPVQRRDGEEGGGMDGRVSDLV
DGGRMALDNKTSLLNTPLLSSSPRGAREHFSDSPFKHSRKDTSLDDSAHLTDDSGLDQSE
LVAELLKELSNHNERIEERKAALCELLKLIRENTLQVWDEHFKTILLLLLETMGDREHVI
RTLALRVLREILSKQPWRFKNYAELTIMKALEAHKDPHKEVVRAAEETAAMLALSISPEQ
CIKVLCPIIQSADYPINLAAIKMQTKVVERIPREGLASMLPEIVPGLVQGYDNSESSVRK
ACVFCLVAIYAVIGEDLKPHLSQLSSSKLKLLNLYIKRAQSGSSGGDPSTEAL
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacatgacaacatggactattattaccagcaggtagtgcagaaggacgttacc
cgcagactgcaggtcggccaggaccttatcgactacctaaatgacccgcagcggtcccca
gacgtagagcaagacaaacctcgtttggataaaaccatagacgagttaacgggatgggtc
aactcaagcaatttcaaggtggcgctgttagggattgacatctgtagtgcgtttgtggat
cgtttgggagagcggtttaaaggataccttggcacagtcttgccagctctggtagatcgg
ctgggtgatgggaaggaccaggtcagggagaacagccaagctctgatccttcgatgcatg
gagcagactgcatcacccatgtacatctgggaacggttgcttcctggttttaagcataaa
aatttccgaagccgggaaggaatctgcttttgtctcagcgccacgctgagcacgtacgga
gcccagtcgcttggtctcagtaaattggttcctcatctctgctccttgactggagaccag
aatccacaggtacgggaggccgcgaccaccacgctggtggacgtttaccgccatgtcggc
gaacgagtccgggctgacttggggaaaaggggacttccagctccgcggttacaggcaata
tttgctcggtttgatgaagccctgaattcaggcaacatggctctcagccccagtcacgat
cgtagtttcgatgacaacgacagtgtggatgaacgctcgtcctctgctcaggccgctttt
aaggttcccaaagttcccaagaagcctgcagaatcctctgctgcgcgcagacccagcgct
acaggcggaaaacttgtgtctaaggaaagtgccggtgctatcgatgaagaggattttgtt
aaagcttttacagatgtccccactgtccagatctactcagcgagggatcttgaagacaac
ctcaataagatccgggagatctgttcagatgacaaacacgactgggaccagagagcgagt
gctatgaagaagatccgctccttgctggtggcgggtgcagctagctacgactgtttctac
cagcacctacggctgctggacggagccttcaagctgtcagctaaagacctgcgctcacaa
gtggtcagagaggcctgcatcactgtcgcccacctctcatcagtgctgggcaataaattc
gatcatggagcggagggcatcgttcctgtcctgttcaacctcattcccaattgtgctaaa
gtcatggccacatctggcgtgtcggccatccggatcattatacggcacactcacgttccc
agactcatcccgcttatagccagcaactgcacatccaagtctgtggctgtccggaggtga
gaggctgcatcatgttgtgatatattaaatcttatagctgaaaggaaatggaagacccac
tctctagaaaggcacactgcagttctagttgaaagtatcaaaaagggacttcatgatgca
gactcagaggccagagtggaagctcgcaaggcttactggggtttgaggaatcacttccca
gcagaagcagatgctctctacaactccttagagacgtcataccagagaaccctccagtcc
tgcctgaagagctctggaagcgtggcctcgcttccccagagtgaccgctcctcctcgtcc
tctcaggagagcctgaaccgtcctctttcttccaaatggtctgcagctccagggcgagtc
cctgccagttcaaaaggtggggtgtcgttgacgtccctgcagcgttcccgtagcgacgtg
gatgtaaacgcggcagcagtttctaaacagcgccacgtcggacaagccagaggagcgggc
cagcagcccgcccgctcctactcctctctggatgatgcttctgataagacagatggccgc
gtccgtacgaagcagctgttgtccacagccagcagcgtcaccagccaggtggactctcgg
ggacgcagtcgcgccaaaatggtctcccagtcgcaacgttccgacgaatccgattgcaca
ccaggatctcagtctgctaaccctgtcggtgccggcagtcgcagtggttccccgggccgc
gtcttgaccaccacggctctgagcaccatgagctccggggctcaccgggtgctcccggga
cctcagggggacggacacaggcggagccgcatccctcgcagccagggctgctcccgggac
tcatcaccgactcgtctgtccgtcgctccttctagcattagttccatctacaatggaagc
agaggagcccggggcagccgcatcccgcggcccagtatgagtcagggctgcagcagagat
gccagcagagagagcagccgcgacaccagcccagtacgctccttcacgcccctcgccaca
cggagctactctcgctccactggagctctccacacacctgatgcttttggggctgcaggc
tcaggtttcgggatcagccagtctagtcgcctctcctcttcggtcagtgccatgcgggtc
ctgaataccggctcggatgtggaggaggcacttgcagatgcgttgctgttgggcgacatg
agatctaagaagaagccagcacggcggcgatatgagaactacagcatgtactctgatgac
gacgccaacagcgacgcgtccagcgcgtgttctgaaaggtcctacagctcacggaacggg
ggcgccattcccacgtacatgaggcagacagaagatgtggcggaggtgctcaaccgctgc
gccagtgccaactggtcagagaggaaggaggggcttttgggccttcaggctcttctgaaa
aaccagcgaaccctcagccgggtggagttaaagagactgtgtgaaatcttcaccaggatg
tttgcagaccctcacagtaagcgagactccggcagggtctacggcacggcagaatccggt
ataagctcagcctccttcaagagagtgttcagtatgttcctggagactctggtggacttc
attcaggtccacaaggacgacctacaggactggctattcgtcctgctcacacagctgctg
aagaagatgggagcagaccttctgggctccgtacaagccaaagtgcagagagctctggac
gtcacgagggagtccttccccaatgacctccagttcactattctaatgaggttcactgtg
gatcagacgcagacgccgaacttgaaggtgaaggtggccattctgaagtatatcgagacc
ctgactctacagatggaggccccagactttgtgaactccagtgaaacccggctggctgtc
tcacgcatcatcacctggacgactgaacccaagagctccgatgtcagaaaggcagcccag
tcggtgctaatcgccctcttccagctgaacactccagagttcaccatgctgctggcagct
cttcccaaaacctttcaggatggggctaccaagctgctccagaaccatttgaagaacacg
ggcagtgttgcacaggcaccaatgggcagcccgctgactcgccacactccccgatcgcca
gccagctggtccagtcctgtcacttctcctaccaacacctcccagaacaccccatcacca
agtgcatttgactatgacacagaaaacatgaactcggaggacatctacagctccctcaaa
ggtgtcacagaggcgatccagaatttcagcgtgcgcagccaagaggatatgaacgatcca
gtgcaacggcgagacggagaggagggcggtggaatggacggcagagtttcagacttggta
gatggcggccgcatggctcttgacaacaagacgtccctcctgaacaccccgctcctgtct
tccagcccccgtggggcgcgggagcacttctccgactccccctttaaacacagccgcaaa
gacaccagcctggatgactcggcacatctcaccgacgatagcggcctggaccagtcagag
ctcgtggctgagctcctcaaagagttgtccaatcacaacgagcgcatcgaggaaaggaaa
gcggcgctgtgcgagctgctgaagttgatccgtgaaaacacgctacaggtgtgggatgag
cactttaagacgatcctgcttctgctgctggagacgatgggggacagagagcacgtgatc
cgaacactagccttacgggtgcttagggagattctgagtaagcagccctggaggttcaag
aactatgcagaactcaccatcatgaaggccctggaggctcacaaagaccctcacaaggag
gtggtacgagcagcggaggagacggcagccatgttggcgctgtccatcagccctgagcag
tgcatcaaagtgctgtgccccatcatccagtccgccgattaccccatcaacctggctgcc
atcaagatgcagaccaaggtggtggagcggatccctcgagagggtctcgccagcatgtta
cccgagatcgttccaggacttgttcagggttatgacaactctgaaagcagtgtgaggaaa
gcctgcgtcttctgcttagtggccatttatgctgttataggagaagacctcaaaccacac
ttaagtcagctgtccagcagcaagctgaagctgctgaatctgtacatcaagcgcgctcag
tcgggctccagcggaggggacccatcgactgaagccctatag
DBGET
integrated database retrieval system
