Oryzias melastigma (Indian medaka): 112161279
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Entry
112161279 CDS
T07439
Symbol
itgb6
Name
(RefSeq) integrin beta-6
KO
K06589
integrin beta 6
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04510
Focal adhesion
oml04512
ECM-receptor interaction
oml04810
Regulation of actin cytoskeleton
oml04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112161279 (itgb6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112161279 (itgb6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112161279 (itgb6)
04810 Regulation of actin cytoskeleton
112161279 (itgb6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oml04147
]
112161279 (itgb6)
04515 Cell adhesion molecules [BR:
oml04515
]
112161279 (itgb6)
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
112161279 (itgb6)
Cell adhesion molecules [BR:
oml04515
]
Integrins
Integrin beta subunits
112161279 (itgb6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
PSI_integrin
EGF_integrin
EGF_2
I-EGF_1
EGF_Teneurin
vWA_SIBA-E
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
112161279
NCBI-ProteinID:
XP_024152114
Ensembl:
ENSOMEG00000014664
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All DBs
Position
LG3:11940217..11953362
Genome browser
AA seq
790 aa
AA seq
DB search
MGFLLLSLILQYWIHTVEGSCSEGSVVTCDECLQLGANCAWCTEENFTDWFSVSQRCDTL
NNLLERGCDRAHIYLPVSEAQILQDRPLEKKPGAGNQTQISPQKMSLKLRPGSEVTFQVK
IKHTEDYPVDIYYLMDLSASMYDDLGNIKDLGSSLSKEMATLTSKFRMGFGSFVEKPVLP
FIQITEEQLGNPCSDTTVVCQPTFGYKHVLPLTSRTDRFNEIIAKQQVSGNVDPLEGGFD
AIMQAAVCGDKIGWRNDSMRLLVFVSDADSHFGMDSRLAGIVIPNDGQCHLDENNEYSMS
TVQEYPTLGQLIDKVVENNILLIFAVTDDKINIYKNYADLIPGATVGVLAKDSGNVLELI
VTAYKELRSEIELEALGDTEELRMSFTAMCPNGTTFPDVKYCSNIKPGETVVFNVSVELP
GCLSGLRHFSLKAVGLQDSLDVELESLCSCDCQQPPTANSSQCTEGQGVFQCGVCACQPG
FLGAQCECNEETALLSNCHATNDSEKCNGQGDCYCGQCVCHKSSFGRIYGPYCECDNYSC
VRFRGELCGGHGVCDCGDCHCESGWTGDYCNCSTDTDTCMSEDGDLCSGRGICNCGKCVC
TVPGASGDKCENCPTCGEACISARTCVECHLQDEEELGLCEHECSRAKIVVNVTSDKDYY
SNPSMPCTLKMENECWVSFNVVEDETGVIAYNLQKYGCPEAPDIPMIILGVSLSVVCIGL
ILLAVWKVLVSVHDKKEVAKFEAERAKAKWQTGTNPLFKSSTSTFKNVTYKNLYREEFNN
DSLLVINWKQ
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggggtttctactgctgagcctgattctgcaatactggatccacaccgtggagggatcc
tgctcagaaggcagcgttgtgacctgtgatgagtgtctgcagctcggtgctaactgtgcc
tggtgcacagaggagaatttcacagactggttttcagtctcacaaaggtgtgacacgctg
aataatttgttggaaaggggatgtgacagagcccacatctatttacccgtctctgaagcc
caaattcttcaagatcgacctctagagaagaagccaggcgctggaaatcagactcaaatc
tccccgcaaaaaatgtccctgaagctgcgacctggtagtgaggtgacttttcaagtaaaa
ataaagcacaccgaagattatcctgtggacatctactacctgatggacctgtctgcatcc
atgtatgatgacctagggaatatcaaggacttgggttcttctctgtctaaagagatggcc
acacttaccagtaaattccggatgggttttggatcgtttgtagagaaacctgtccttcct
tttatccagatcacagaggagcaactgggaaacccttgcagcgacacaaccgtggtttgc
cagccaacctttggctataaacacgtcttacccctgacaagcagaactgacaggttcaac
gagatcatcgcaaagcaacaagtgtccggaaatgttgatccgttggagggcggattcgat
gccatcatgcaagcagctgtttgcggggacaagattggctggaggaatgattcgatgcgt
ctgctggttttcgtcagtgatgctgattcacactttgggatggatagtaggttggctggc
attgtgattcccaatgatggccagtgtcacctggacgagaacaatgagtattccatgtct
acagtgcaggaatatccaactctcggtcagctgatcgataaagtggtggaaaacaacatc
ctgctgatatttgctgtaacagatgataagataaacatttataagaattatgcggatctc
atacctggcgccacagtcggcgttctggcaaaggattcagggaatgtcctggaactgatt
gtgacggcgtacaaagaactccgatctgagattgagctggaagctcttggagacacagag
gagctgcgtatgtccttcaccgccatgtgtcctaacgggacgacctttcccgatgtgaag
tactgctccaacatcaagcctggagagacggtggtcttcaacgtgtcggtggaacttcca
ggatgcctgtcaggactgcgacacttctctctgaaggcggtgggccttcaggacagctta
gatgtggaactggagtctctttgttcgtgcgactgccagcagcctccgacagcaaacagc
agccagtgcactgagggccaaggcgtcttccagtgtggtgtgtgcgcctgtcagccgggc
ttcctcggagctcaatgcgaatgcaatgaggagactgctttgttgagcaactgccacgca
accaatgactcagagaaatgcaatggtcagggggactgttattgtggccagtgtgtgtgt
cacaaatccagctttggccgcatctatgggccttactgtgagtgcgacaattactcctgt
gttcgcttccggggagagctctgtggaggtcatggtgtgtgtgactgcggggactgtcac
tgtgaaagcggatggacgggggattactgcaactgcagcactgacactgacacatgcatg
tctgaggacggcgacctctgcagcggcagggggatatgcaactgcgggaagtgcgtttgc
accgttcccggagcatccggggacaagtgtgagaattgcccaacatgtggagaagcgtgc
atctctgcaaggacctgtgtggaatgccaccttcaagacgaggaggaacttggtctatgt
gagcatgagtgcagccgggcgaaaatcgtggtcaacgtgacatcagataaagattattac
agtaacccgtccatgccgtgcactctgaagatggaaaacgaatgctgggtctcttttaac
gtggtggaggatgagacgggagtcattgcttacaatcttcagaaatacggatgcccggag
gcccccgacatccccatgatcattctgggggtgtccctttccgttgtgtgcattggcctc
atcctgctggctgtgtggaaggtgctggtttcagtccacgacaagaaggaggtggccaag
tttgaggcagagagagcaaaagcaaaatggcaaacgggaaccaatcctctcttcaaaagc
tcaacatctacatttaaaaatgtaacttacaagaacttatacagagaggaatttaacaat
gattccttactggtgataaactggaagcagtga
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