Oryzias melastigma (Indian medaka): 112161295
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Entry
112161295 CDS
T07439
Symbol
chrna5
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112161295 (chrna5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112161295 (chrna5)
Ion channels [BR:
oml04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
112161295 (chrna5)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
112161295
NCBI-ProteinID:
XP_024152153
Ensembl:
ENSOMEG00000014931
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All DBs
Position
LG3:complement(25366603..25375029)
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AA seq
476 aa
AA seq
DB search
MMLRAGGATISVILLLLLPLLCWCHLCHSLRVPKLSSYAKAEDKLFKHLFGTYQKWVRPV
EFLNQTIPVKFGLAISQLVDVDEKKQLMTTNVWMKQEWIDMKLRWKPEDYLGITTIRVPS
DRIWLPDVVLYDNSDGRFEGTVTKAVVKYDGTISWTPPANFKSACTIDVTFFPFDLQNCS
MKFGSWTYDGSQVDIILEDFHVDKKDYFDNGEWEIVKATGSRGLRTDGSTSYPTITYFFI
IRRLPLFYTLFLIIPCIGLSFLTILVFYLPSNGNEKISLCTSVLVSLTVFLLVIEEIIPS
SSKAIPLIGEYLVFTMIFVTLSIIITIFAINIHYRSSSTHHDMAPWVRRIFLHRLPKLLC
MRSHVDRYATAGLASTGKTTGQENMKNSTPEFTHILHTRHNLQTALESIRYITMHVVKEN
QVREVVQDWKYVAQVLDRMFLWAFFLVSVLGTALLFIPVIYKWASIIVPDYAGSIL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgagggcaggaggggcaaccatctcagtcatactgctgctgcttctgcctctg
ctgtgctggtgccacctgtgtcactcgctgcgcgtcccaaaactctcttcttatgcaaaa
gcagaggataagctcttcaaacacctatttggaacctaccagaaatgggtccgtcctgtc
gagtttttaaaccagacgatcccggtaaagtttgggttggccatctcccagctggtggat
gtggatgagaaaaagcagttaatgacaaccaatgtttggatgaaacaggaatggattgac
atgaaattgagatggaagcctgaggactacctgggcatcacaacaatccgtgttccttct
gacagaatctggctcccggatgttgtcctatatgacaactcagatggacgttttgaggga
actgtcacaaaggctgttgtcaagtacgatggaaccatatcttggactcctccagctaat
ttcaagtcagcttgcaccatagatgttaccttctttccttttgacctccagaattgctcg
atgaagtttggatcctggacctatgatggctctcaggtggacatcattctggaggacttc
cacgtggacaagaaagactacttcgacaatggagaatgggagatagtgaaggccacaggc
agccgtggtcttaggaccgatggcagcacttcctatcccaccatcacttattttttcata
attcgcaggttgcctcttttttacactctcttcctcatcatcccctgcattggtttatcc
ttcctcaccatccttgtgttttatctgccctccaacggcaatgagaagatctccctctgc
acctcagtgctggtgtccctcactgttttcctccttgtcattgaagagataatcccctcc
tcttcaaaggccattcctctcattggggagtatctggtcttcaccatgatttttgtcacc
ctgtccatcatcatcaccatatttgctatcaacattcactatcgctcttcttccacacat
cacgatatggcgccgtgggtgagaaggattttcctacaccggttgcctaaactgctgtgc
atgagaagtcatgtggaccgctacgccacagcaggactggccagcacgggaaagacaacg
ggacaggagaatatgaagaactcaactcctgaattcacccatatcctgcacactcgacac
aacctccaaactgccctggagtccattcgctacataaccatgcatgtggtcaaagaaaat
caagtcagagaggtggtgcaggactggaagtacgttgcccaggtgctggatcggatgttt
ctgtgggctttcttcctggtttcagtccttggaactgctctcctcttcattccagttatt
tataaatgggccagtataattgtccctgactatgctgggagcattctctaa
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