Oryzias melastigma (Indian medaka): 112161296
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Entry
112161296 CDS
T07439
Symbol
chst1
Name
(RefSeq) carbohydrate sulfotransferase 1
KO
K01022
keratan sulfate 6-sulfotransferase 1 [EC:
2.8.2.21
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00533
Glycosaminoglycan biosynthesis - keratan sulfate
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00533 Glycosaminoglycan biosynthesis - keratan sulfate
112161296 (chst1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oml01003
]
112161296 (chst1)
Enzymes [BR:
oml01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.21 keratan sulfotransferase
112161296 (chst1)
Glycosyltransferases [BR:
oml01003
]
Unclassified
Sulfotransferases
112161296 (chst1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sulfotransfer_1
Sulfotransfer_3
Motif
Other DBs
NCBI-GeneID:
112161296
NCBI-ProteinID:
XP_024152154
Ensembl:
ENSOMEG00000004247
UniProt:
A0A3B3D1I1
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Position
LG3:830490..836137
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AA seq
428 aa
AA seq
DB search
MQCSWKSVILLALASIAIQYTAIRTLTSKPFQLCPLPSPQNCGVGAQETDPSFERGTAGG
GGCDDYSYFTVNSTRKLHILVLATTRSGSSFVGQLLNQHQDIFYLFEPLFHVYATLVPRQ
SHTRNPAERRVTLGASRDLLRSLYGCDLYFLENYIKPTPSNHTTDKLFRRGASRALCQQP
VCDAFGPSDLNVEEGDCVKKCTTLNMTLATEACQEKRHVAIKVVRVPEIGDLRALVEDPR
LNIKVIQLVRDPRGILSSRIETFRDPYRLWRIWRATGRRPYNLDLNQLTVICEDFSSSVS
TGLSHPHWLKGKYMVVRYEDLARNPLLKTQEMYDFLGLSMDKNVKHWIRTNTQGSNEPSA
KHKFGTVRDSAANAESWRLKLSYDIVDFTQTVCQKVLNQLGYKAVKSVDELKNMSFSLVQ
DKAFVPFL
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgttcctggaagtcagtgattctgctggccttagcctccattgccatccagtac
acagctatccggacacttacctccaagccgttccagctctgcccactgcccagcccccag
aactgcggtgtcggggctcaggagacagacccatcctttgagcgaggaacagcaggaggg
ggaggttgtgacgactactcctacttcacagttaactccacccgaaaactgcacattcta
gtcttagccaccacacgaagtggatcctccttcgtcggccagctgctgaatcagcaccag
gatatattctacctgttcgaacccctttttcacgtgtacgccacattggttccacgtcag
tcacacactcgcaatccagcagagcggcgtgtgactttaggtgccagtcgagaccttctt
cgtagcctgtatggctgtgacctgtacttcttggaaaactacatcaaacccactccttca
aatcacaccacagacaagctgttccgtcgcggcgccagccgggccctgtgccagcaacct
gtgtgcgatgccttcggtcctagtgatctaaacgtggaagaaggagattgtgtaaagaaa
tgcacaactctaaacatgaccctagcgactgaagcgtgccaggagaagcggcatgttgcc
atcaaagttgttcgggtaccagagattggggatctcagagctctggttgaagatcctcga
ctgaatattaaagtaattcagctagtcagagaccctcgtggcatcctgtcatcacggatt
gagacgttcagggacccatatcgtctgtggcgcatttggagggccacggggaggaggccc
tataatctagacctgaatcagctcacagttatttgtgaagacttttccagctcagtttcc
acgggtttgagccacccccattggcttaaagggaaatacatggtggttcgatacgaggat
ttggctcgaaatccacttctcaagacacaggagatgtatgacttcctgggattgtctatg
gataaaaatgtgaaacactggatacgtacaaacactcaaggcagcaatgagccttcagct
aaacacaagtttggcacagtgagggactcggcagcgaacgcagaaagttggcgtttgaaa
ctatcttatgacattgtagatttcacgcaaacagtttgtcagaaggtacttaatcagttg
ggatacaaggctgtgaagtcagtcgacgaactgaaaaatatgtccttctcgctggtacag
gacaaagcctttgtaccgtttttgtaa
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