Oryzias melastigma (Indian medaka): 112161300
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Entry
112161300 CDS
T07439
Symbol
irx3a
Name
(RefSeq) iroquois-class homeodomain protein IRX-3a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112161300 (irx3a)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
112161300 (irx3a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
112161300
NCBI-ProteinID:
XP_024152160
Ensembl:
ENSOMEG00000015802
UniProt:
A0A3B3C9M5
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Position
LG3:26597707..26600782
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AA seq
414 aa
AA seq
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MSFPQLGYQYIRPIYPPERQGIASNARAGTDLSPSGALSNVLSTMYGSPFAAAAQGYGAF
LPYTNDISIFNQLGAQYELKDSPGVQHPGFAHHHPAFYPYGQYQFGDPSRPKNATRESTS
TLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNRTD
EEGNVYSSDHEGEEGDKREDEEEIDLENIDTENIESKDDLDDQDDLHSDSKLDGRSDSEI
SDGYEDLQEPRFLKAVGKDRDAQRGGEHFHHHHHASMDIKASQPNGEPLKLNPAPAGDNN
PAPAQKPKIWSLAETATAPDNPRKSPQMNGAAQTLITPHRLISSCPIGKIQNWTNRAFSA
HQLALLNSNHYLGLANQAAATGLALYSSSSSSSRQTDDKSHSSETPVTGTCPRH
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccctcagctgggatatcagtacatccgaccgatatacccgccggagcgccag
gggatcgccagcaatgcccgcgctgggacagacctcagtccgtcgggcgcactctccaac
gtcctctccactatgtacggatctcctttcgccgcagccgcgcagggctacggagccttc
ctcccttacacaaacgatatatctattttcaaccagctgggggctcagtatgaactgaag
gacagtcccggcgtccagcaccccgggttcgcccaccatcaccctgctttttacccatat
ggtcagtatcagttcggtgacccgtccagacccaaaaatgccaccagggagagcaccagc
actttgaaggcctggctgagcgagcaccgcaagaacccctaccccaccaagggcgagaag
atcatgctggccatcatcaccaagatgaccctcacccaggtgtccacctggttcgccaac
gcgcggaggaggctaaagaaggagaacaagatgacctgggccccgcggaaccgcaccgac
gaagaggggaatgtttacagcagcgatcacgagggggaggagggggacaagagggaggac
gaggaggaaatcgacctggagaacatcgacacggaaaatattgagagcaaggacgacttg
gacgaccaggacgacctgcattcagacagcaaactggacgggaggagtgactcggagatt
tctgacggctatgaggatttacaagagccgaggtttctaaaggctgtggggaaggacaga
gacgcgcagagaggaggggagcacttccatcaccaccaccacgcttccatggacatcaag
gcgtcccagcccaacggggagccgcttaaactgaacccggcgcccgcgggtgacaacaac
ccggccccggcccagaaaccaaagatctggtctttggcagagacagccacggccccggac
aacccgcgcaaatccccgcagatgaacggcgccgctcagacactcatcaccccgcacaga
ctcatctcttcctgtcccattgggaaaatccagaactggacgaaccgagccttttcggcg
caccagctggctttactgaactccaatcattatctgggactggcgaaccaggccgcagcc
accggcctggcgctctacagcagcagcagcagcagcagcaggcaaacggacgacaagagt
catagttcagagactccagtcacaggtacatgtccccgacactga
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