Oryzias melastigma (Indian medaka): 112161375
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Entry
112161375 CDS
T07439
Symbol
spock2
Name
(RefSeq) testican-2 isoform X1
KO
K08136
testican
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oml00535
]
112161375 (spock2)
Proteoglycans [BR:
oml00535
]
Extracellular matrix (ECM) proteoglycans
Others
112161375 (spock2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPARC_Ca_bdg
Thyroglobulin_1
Kazal_2
EF-hand_7
Kazal_1
Motif
Other DBs
NCBI-GeneID:
112161375
NCBI-ProteinID:
XP_024152210
Ensembl:
ENSOMEG00000004933
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Position
LG15:complement(20811106..20851816)
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AA seq
418 aa
AA seq
DB search
MLKTSDIVCLLVPLVMLARSSLQADAKGGKEAEKAGNFMEDEQWLSTISQYSRKIKHWNR
FRDEVEDDYVRTWDENQGSNDNVDTTKDPCQKVKCSRHKVCIAQGYQRAVCVNRKKLEHR
LKQPALRSPDGNCQPCPISSTGPVCGSDGHNYASKCKLEQQACLTGKDLTLKCSGLCPCP
TAAPTSKEGKREGCTGQDLSDLGERLRDWFQLLQSNAKQNNSKPGARSSTTSVLDRSLVA
SCKDSIGWMFSKLDTNNDLYLDQAELAAINLDKYEICIRPFFNSCDSYRDGKVSTAEWCL
CFWREKPPCLAELERIQVLDGGKRKFGRFIPSCNEDGFFRRQQCDRGECWCVDQNGGEIA
GSRIRGKPNCDYEMAYSGDFGSGVGWEDEEEKEAEETAEEAEEEEGEVGEVDDGGYIW
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaacctcggacatcgtgtgccttctcgtcccgctggtgatgctggcgaggtcc
agcctgcaggcggacgcgaagggcggcaaggaggcggaaaaagcggggaatttcatggag
gacgagcagtggctgtccaccatttcacagtacagccgcaagatcaagcactggaatcgc
ttcagagacgaggtcgaggatgattatgttcggacctgggatgaaaatcaaggctccaat
gacaacgtagacaccaccaaggacccctgtcaaaaggttaagtgcagccgacacaaggtg
tgtatcgcccagggctaccagagagccgtgtgcgtcaatcgtaagaagctggaacacaga
ctgaagcagcccgccctgcgctctcctgatggaaactgtcagccctgtcccatctcctcc
accgggcccgtgtgcggatcggacggtcacaactacgcttcgaagtgcaagctggagcag
caggcgtgccttacagggaaggatctcaccctgaagtgttcaggtctgtgtccttgtcca
actgcagctcctacgtccaaggaaggcaagcgtgagggctgcactggacaggatctgtct
gatctcggcgagcgtctgagggattggttccagcttctgcagagcaatgctaagcagaac
aacagtaagcctggggccagatccagcaccacatcagtgctggacaggagcctggtggcc
agctgtaaggactccataggctggatgttctccaagctggacaccaataatgacctgtat
ttggatcaggccgagctggccgccatcaacctggacaagtacgagatctgcattcgtccc
tttttcaactcctgcgactcgtacagggatggcaaggtctccacggcggagtggtgcctc
tgcttctggcgagagaagccaccctgtctggctgaactggagagaatccaagtcttggat
ggtggaaagagaaagtttggtcgattcatccccagctgcaatgaagacggcttcttcagg
aggcagcagtgcgaccggggcgagtgctggtgtgtggatcagaacggaggagagattgct
ggatccaggattcggggaaagccaaattgcgattatgaaatggcatattcaggagatttc
ggcagcggggtcggatgggaggatgaggaggagaaagaggcagaggagactgcagaggag
gctgaagaggaggagggagaagtgggagaggtggatgacgggggatatatttggtaa
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