Oryzias melastigma (Indian medaka): 112161392
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Entry
112161392 CDS
T07439
Symbol
ikzf1
Name
(RefSeq) DNA-binding protein Ikaros isoform X1
KO
K09220
IKAROS family zinc finger protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oml01009
]
112161392 (ikzf1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112161392 (ikzf1)
Protein phosphatases and associated proteins [BR:
oml01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112161392 (ikzf1)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112161392 (ikzf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-C2H2_15
zf-H2C2_5
zf-C2H2_11
CPSF100_C
DUF7128
zf-C2H2_REST
DUF6487
GAGA
zf-met
Motif
Other DBs
NCBI-GeneID:
112161392
NCBI-ProteinID:
XP_024152239
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All DBs
Position
LG15:complement(14948345..14954822)
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AA seq
447 aa
AA seq
DB search
MNGEEEEECVEDLRVVDSSGAKVNGSQPSPEAKAFSSAGGIRLPNGKLKCDICGIVCIGP
NVLMVHKRSHTGERPFQCSQCGASFTQKGNLLRHIKLHSGEKPFKCHLCSYACRRRDALT
GHLRTHSVGKPHKCAYCGRSYKQRSSLEEHKERCHNYLQCMGLQNSIYTVVKEESNQNEQ
REDLSQTGSDRALVLDRLANNVAKRKSTMPQKFVGDKRLSDLSYDGAAGELIQPHVIDQA
INSAISYLGAESLRPLVQTSPASSDVGLSSLYALHKPASESHTGTALSAKDSAAENLLLL
SNSKSASSEKDGSPSHSGQDSTDTESNNEDRPAGAASGLIYLTNHITSGVRNGVLPLVKE
EQQRQYDAIRANMEMASEGFKVVTSDGEQVRAYRCEHCRVLFLDHVMYTIHMGCHGFRDP
FECNLCGHRSQDRYEFSSHITRGEHRY
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcgaggaggaggaggagtgcgtggaagacttgcgtgtggtcgattcctcgggg
gccaaggtgaacggctcacagccgagccccgaagccaaggccttctcctcggctggcggt
atccggctgcccaacgggaagctcaagtgtgatatctgtgggatagtttgcattgggccc
aatgtgttgatggtgcacaagcgaagccacactggagaacgtccattccagtgcagccag
tgtggtgcgtctttcacccagaagggcaacctgctgcgtcacatcaaactccactcagga
gagaagcccttcaagtgtcatctgtgcagctacgcctgtcgcaggagggacgccctcacc
ggacatcttcgtacccactcggttggaaaaccccacaaatgtgcctactgtgggcggagt
tataagcaacgcagttctcttgaggagcacaaagagagatgtcacaactacctgcaatgc
atgggactgcaaaacagcatctacacagtagtaaaggaagaaagcaaccagaatgagcag
agggaagacttaagccagacgggatctgacagagccttggtgctagacagattagctaat
aatgtagctaagcgtaagagcactatgccccagaagtttgtgggagacaaacgtctctcc
gatctgtcttacgacggagcagcaggggagctgatccagccgcatgtcattgaccaggca
atcaacagcgccatcagctacttgggggctgaatccctccggcctctggtccagacatcc
ccagcctcctcagatgtgggtctctcatctttgtatgccctccacaagccagcatcagag
agccacacggggacggccttgtctgccaaggacagcgctgctgagaacctgctgctgctc
tccaactccaagtccgcttccagcgagaaggacggctcgcccagccacagcggtcaggac
tccacggacaccgagagcaacaatgaggaccgcccggctggagcagccagcgggctcatc
tatctgaccaaccacatcacctccggggtgaggaacggggtgctacctctggtgaaggag
gagcagcagcggcagtacgacgccatccgagccaacatggagatggcctccgagggcttt
aaggtggtgacgtcggacggggagcaggtaagggcataccggtgtgaacactgccgcgtg
ctcttcctggaccacgtcatgtacaccattcacatgggctgccacggcttcagagacccc
ttcgaatgcaacctctgcggtcacaggagtcaagatcgctatgaattctcctctcatata
acccggggggagcaccgctactga
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