KEGG   Oryzias melastigma (Indian medaka): 112161411
Entry
112161411         CDS       T07439                                 
Symbol
sf3b5
Name
(RefSeq) splicing factor 3B subunit 5
  KO
K12832  splicing factor 3B subunit 5
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112161411 (sf3b5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oml03041]
    112161411 (sf3b5)
Spliceosome [BR:oml03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    112161411 (sf3b5)
 Complex B
    112161411 (sf3b5)
 Complex C
   U2 SnRNP specific factors
    112161411 (sf3b5)
SSDB
Motif
Pfam: SF3b10 BcGHD
Other DBs
NCBI-GeneID: 112161411
NCBI-ProteinID: XP_024152262
Ensembl: ENSOMEG00000010620
LinkDB
Position
LG15:complement(3801689..3805709)
AA seq 86 aa
MTDRYNIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFSIAENES
KARVRFNLMEKMLQPCGPPADKPDDA
NT seq 261 nt   +upstreamnt  +downstreamnt
atgactgaccggtacaacatccacagtcagctggagcatctccagtccaagtacatcgga
acagggcatgctgacaccaccaaatgggaatggctggtgaaccagcaccgtgactcgtac
tgctcctacatgggtcattttgacctgctcaactacttttccatcgctgaaaacgaaagc
aaagctcgcgtccgcttcaacttgatggagaagatgcttcaaccatgtggaccgccggca
gacaaacccgatgacgcctaa

DBGET integrated database retrieval system