Oryzias melastigma (Indian medaka): 112161414
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Entry
112161414 CDS
T07439
Name
(RefSeq) PDZ domain-containing protein 7 isoform X2
KO
K21882
PDZ domain-containing protein 7
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oml03037
]
112161414
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112161414
Cilium and associated proteins [BR:
oml03037
]
Primary cilia and associated proteins
USH complex and associated proteins
112161414
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
112161414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
112161414
NCBI-ProteinID:
XP_024152265
Ensembl:
ENSOMEG00000004184
LinkDB
All DBs
Position
LG15:complement(21536202..21551460)
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AA seq
971 aa
AA seq
DB search
MDNSFHPAWKEMTNGGGRPHFNNGGQNGGSHSTMRYMVKKQNRRRHRSSSPMGRVILINA
PADGGDDSEDIHTVTVDKSSDGRLGFSVRGGSEHGLGIFVSKVDDDSSAAQAGLTVGDKL
VEVNGVSLESITMSSAVKVLTGNNRLRMVVRRVGKIPGIRYSKEKTTWVDLIHRRMVVEE
GSGAPSEASVDCALRRIVHLFTTSDDYCLGFNIRGGKEFGLGIYVSKLDPGGLAEQHGIK
MGDQILAANGVSFDDITHSNAVEVLKSHTHVMLTIREVGRYPAYKEMVAEYGWLDKLANE
GPPPSSHASDSNSSVSSLSSSTPLSSLSGLSQVLFPPIFHTEMVDVAISTEDRTQRPASS
ERTADTAIQTDLQVPNYLDHPSPNRSFSDRPGSADTSRTVGETLLLKDTVIRGKGEGPRE
MGGAREGGRHRGRALSTGDREGEKRSPKTEALMALSKPRKPIRRSQSHITLSEDRNKKKK
KQQKEKVPSEGKTNLQRSKTFVNLLFRKDHKEKKSQSQHPGKEKERSRPFQLFTSPRESR
VGSPLLRPETLQHVEDMAKKLLSPDEVAAVMRHCQRFLSDNVIEDLVRPLLAILDRPEKL
LLLREIRMLIPTTELCHFDNMVMPFELEAYDILKNRSMRSPALRSPRSGTPRRHLITPVP
DNRGGFQLQSVQNTLQERLLIEEFDRLRLASQQSGHLPPSRAFTPLLDVPVDSFASNITR
SRSPSPSHGFLLPESPFSTQHGRHRLPSPSRRENGTQRYDAVSQLSVSELEDAALERGRS
PVRNGRGRLRREESPDSIDARRSRQVGYTEVSVRVPSQRRERTPLADVFDPQRQKSPSRG
TWSTQEMNGHYENGHTVKTKPALPVEEYEISTVTISKAKPSLGISISGGIESKVQPMIKI
EKIFPGGAASTNEALKAGYELLSVDGQSLQGVTHLHAVDVIRRAFSNKAKDPMVFVVKVP
QITNKIHQYIC
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggataactcctttcatcctgcctggaaggagatgacaaatggaggggggcgcccccat
tttaacaatggaggacagaatgggggctcccacagcaccatgcgctacatggtgaagaaa
cagaaccgccgaagacacagatcctcctcacctatggggcgggtcatcctcatcaatgcc
cctgccgatggaggggatgacagtgaagacattcacacagtgacggtagacaagagctca
gacgggcgtctgggtttcagtgtccgaggtggttctgaacatggcctgggcatctttgtg
agcaaagtggacgatgatagctctgcagctcaggctggactgactgttggcgataagcta
gtggaggtcaacggggtcagcctggagagcatcaccatgagcagcgcggtgaaggtcctg
acgggcaacaaccggctgagaatggtggtgaggcgcgtgggtaagatccccggcatccgc
tactccaaggagaagaccacatgggtggatctgattcatcggcgtatggtggttgaggag
ggaagtggcgcaccatcggaggccagcgtcgactgcgcccttcgcaggatcgtccacctc
ttcaccacgtcggacgactactgtctgggattcaacatcagaggtggcaaagagtttggc
ctgggaatctatgtttccaagctggacccgggtggtctcgcagagcagcacggcatcaaa
atgggcgatcaaatccttgcagccaatggggtgagctttgatgacatcacccacagcaac
gcagtggaggtcctgaagagccacactcatgtcatgttgaccatcagggaagttgggaga
tacccggcatacaaggagatggtggctgagtatggctggctcgacaaactagcaaacgaa
gggcctccaccatcctcacacgcctcagactccaactcctccgtgtcttccctgtcctcc
agcacccctctcagctccctcagtggtctctcccaggttcttttccccccaatcttccac
actgagatggtcgatgtcgccatctccacagaagaccgcacccagcgtcccgccagctct
gagcgaacagctgacacggccatacagactgacctccaagttccaaactacctggaccac
ccgtcccccaacaggtcgttctctgacaggccgggcagcgcagacaccagtcggactgtg
ggtgaaacgctgctgttgaaagacacggtcatacgggggaaaggtgaggggccgagggag
atgggaggagccagggagggaggacgacacagggggagggcgttgtccaccggggaccgg
gaaggtgagaaacgctcacctaagacggaagcgctgatggcgctgagcaaaccgcgaaag
ccaatcagacgctcccagagccacatcacgctgtcagaggacagaaataagaagaaaaag
aagcaacagaaggaaaaggtgccatccgagggtaaaaccaacctgcaacgatccaaaacc
tttgtcaacctattgttcaggaaagaccacaaagagaagaaatcccagagtcagcatcct
ggtaaagagaaagagcgaagtcgtccattccagctcttcacctccccgagagaatcgcgt
gtcggcagcccgctgcttcgacccgagaccctgcagcatgtggaggacatggccaagaaa
ctgctcagcccggatgaggtggcggctgtgatgagacattgtcagcgttttttgtcggat
aatgtgatcgaggatttggtgcgcccccttctggcaattttggacagaccagagaagctg
ctgcttctcagagaaataagaatgctgatccccacaactgagctgtgccattttgacaac
atggtcatgccttttgagctggaggcttatgacatcctgaagaatcgctctatgcgctct
ccagctctgcgctcccctcgcagtggaactcctcgacgtcacctcatcacacctgttcca
gacaacagaggtgggtttcaactccagtcggtccaaaacaccctgcaggagcgtctgctg
atcgaggagtttgacagacttcgtctggccagtcaacagtcaggccacctgccaccatcc
cgtgccttcaccccactcctagacgtacctgtggacagctttgcatccaacatcacacgc
tcccgctccccctcacccagtcacggcttcctcctgcccgagtcaccgttcagcacccaa
cacgggcgccaccgtctgccttctccaagcaggagggagaacgggacgcaaaggtacgac
gccgtctcccagctgtctgtgtctgagctggaggacgccgctcttgagcggggaaggtca
cctgtgaggaacggccggggaagactgaggagagaggagagtcctgacagcatagatgcc
aggagaagtagacaggtggggtacactgaagtaagtgtgcgggtcccatcacagcgcaga
gagagaacccctctggcggatgtatttgacccccaaagacagaagagcccaagcagaggc
acatggagcacacaggagatgaatggacattatgaaaacggtcacacagtcaaaacaaaa
ccagccctgccagtggaggaatatgaaatctcaactgtgaccatctcaaaggccaagccg
tcgctgggtattagcatatccggaggtatcgaatcaaaggtccaacccatgattaaaatt
gagaagatattcccaggaggagctgcatctaccaacgaggctctgaaagcaggctacgag
ttgttgtctgtggatggccaaagtctgcagggagtcactcatctgcacgctgtggacgtt
attcgtcgtgcattcagcaacaaggccaaagatcctatggtttttgtggtcaaagtccct
cagattaccaacaagatccatcaatacatctgctga
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