Oryzias melastigma (Indian medaka): 112161424
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Entry
112161424 CDS
T07439
Symbol
itga9
Name
(RefSeq) integrin alpha-9
KO
K06585
integrin alpha 9
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04510
Focal adhesion
oml04512
ECM-receptor interaction
oml04514
Cell adhesion molecule (CAM) interaction
oml04518
Integrin signaling
oml04810
Regulation of actin cytoskeleton
oml04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112161424 (itga9)
04514 Cell adhesion molecule (CAM) interaction
112161424 (itga9)
04518 Integrin signaling
112161424 (itga9)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112161424 (itga9)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112161424 (itga9)
04810 Regulation of actin cytoskeleton
112161424 (itga9)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112161424 (itga9)
Cell adhesion molecules [BR:
oml04515
]
Integrins
Integrin alpha subunits
112161424 (itga9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_3
FG-GAP_3
FG-GAP_2
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
112161424
NCBI-ProteinID:
XP_024152278
Ensembl:
ENSOMEG00000001313
UniProt:
A0A3B3CXV5
LinkDB
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Position
LG15:25560005..25617798
Genome browser
AA seq
1025 aa
AA seq
DB search
MPHPKGHITGLHHVFYVCLSFSVAYSYNIDLEHPLVFRGPQSSFFGYSVLEHYHDNTRWV
IVGAPRANSSYSGSVRSPGAVYKCRVHSNPERRCTEMDLGRGNKPRETCGKTCQGDRDDE
WMGVSLARQDRADGKILACAHRWKNVYYAAEHILPHGYCAIIPESLQGRTKPLIPCYEDH
KQKYGEEHGSCQAGIAGVFTEELVVMGAPGSYYWTGTIKVYNLTSDSFYSPRDSIDSHGY
SYLGYAVAAGHFSSPNVIDIAAGAPQHSGVGKVYIFKIEDPFLVKSFQASGKMMGSYFGS
SLCAVDLNQDGLSDLLVGAPMHSQLRDEGQVSVYLSKGNGVMEEHAVLTGDNAFNAHFGE
SIAAIGDIDDDGYQDIAIGAPKEDDYAGAVYIYHGGATGITQTYSMKLSGRSLNPGLQMF
GQSISGSVDMDGNGYKDVTIGAFMADSVVMLRSRPVVTVDVSIFLPVSINISVPQCHEGH
QNLNCFNATVCMRFRGRQLPGQIELLYNLTADADKRQKSQPGRVYFVQSGSQISQMSQQL
SLDINREECQHYTAFVKKDVKDVFTAITFEVAYSLGRHALAGHSDPELPALTPVLRWRKG
NKIAVRNQTWFEKNCLSDDCAADLRLHGKLLLSGLHVKPHLALGAVRNVSLNITISNAGD
DAYDTNIHFNFSREVFYINFWQKEDKGISCALVDLDFLVCRVGFPFMRAQTKFHFAVIFD
TSKLSGENETLQFLVQAKSANPEHKLYDNFLDLSIPLIHETDTTLTGMVTPSSFVYGNTI
DASRFVQLEDMECNFQPLNLTFQAINKGPSRLPGSTVDIRIPNRLAGSGPDMFHVIETQV
ADGRGNCTPHRNPTPCTIPQDKESIFHSIFSFFTKSGRKVLDCDRPGRACMTITCTLGPQ
FIDEALSIDLKLLLNTEILKRDSSSVIQFVTRGSVQVNNRAAEVPNGLQNDISLVFEALH
SQEPRGYVVGWIIAISLLVGILIFLLLAVLLWKMGFFRRRYREIIEAEKNRNDSDESWDW
MEKSH
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatccaaagggacacataacgggactacaccacgtattttatgtttgtctctcc
ttttcagtggcgtattcctataatatagacttggaacatcctttggtgttccgcggacct
cagtctagtttttttggctactccgtgctggaacattatcatgacaacacacgctgggtg
atagttggagcgccccgggcgaactcttcctacagcggctcggtgcgctctcctggcgcg
gtgtacaagtgccgagttcacagcaaccctgagcgccgctgcacagagatggatctgggg
agaggaaacaagccccgggagacgtgtgggaagacctgccaaggagaccgggatgatgag
tggatgggggtcagcctggcccgtcaggacagagccgacggcaaaatactggcctgtgcc
caccgctggaagaacgtgtactacgccgcggaacacatcctgccacacggatactgcgcc
atcatccctgaatcgcttcagggcaggaccaaaccgcttatcccttgttatgaagaccat
aagcagaagtatggggaagagcatggctcgtgccaagctgggatagcaggagtcttcaca
gaggagctggtggtgatgggggctccggggtcctactattggactgggaccatcaaagtg
tacaatctgacgtctgactccttctacagccccagggacagcatcgactctcatggatac
agctaccttggttatgctgtggcggctggacacttctcctcccctaatgtgatagacatc
gctgcaggggcgcctcagcacagcggcgttggaaaagtttacattttcaaaatcgaagat
ccatttttggtgaagagttttcaagcctcagggaaaatgatgggctcttactttggctcc
tcattgtgtgcagttgatctgaaccaggatggcctgtcagacctgctggtgggggcaccc
atgcacagccagctccgggatgagggccaagtgtctgtgtacctcagcaagggcaatggc
gtgatggaggagcatgcagtcttgactggtgacaatgctttcaatgcacactttggggaa
agcattgcagcaattggagacatagacgatgacggctatcaagatattgccataggggct
cctaaagaggacgactatgcaggagctgtttacatttaccatgggggagctacaggaatt
actcaaacgtactccatgaaactctctggacgcagtttaaaccctggtctgcagatgttt
ggccagtctatctctggcagtgtggacatggatggcaatggatacaaagatgtcaccatt
ggggctttcatggccgacagcgtggtgatgctgaggtcccggcctgtcgtcacagtggat
gtttccattttcctgcccgtctccatcaacatctccgtgcctcagtgccacgaaggccac
cagaacctgaactgcttcaacgccacggtgtgcatgcgctttcgaggcagacagctgcca
ggacaaatagagctgttgtacaacctgacggctgatgcagacaagcggcagaagagccag
ccgggccgagtttacttcgttcagagcggatctcagatcagccagatgagccaacagctg
agtctggacatcaaccgggaggagtgtcagcactacactgccttcgtaaagaaggacgtg
aaggacgtcttcaccgccatcaccttcgaggttgcgtacagcctggggaggcacgcgctg
gccggacactcagatccggagctgccggctctgacgccggtgctgagatggaggaaagga
aacaagattgcagtgaggaatcagacctggtttgagaagaactgcctttcggacgactgc
gctgcagatctgaggcttcacgggaaactgctgctttctgggttgcatgtcaaacctcat
ttggcgcttggagcagtaaggaacgtctccctaaacatcaccatctccaacgccggagac
gacgcctacgacaccaacatccacttcaacttttccagagaggttttctacatcaacttc
tggcagaaggaagacaaggggatttcctgtgctctggttgatttagacttcctggtttgc
agagtgggatttccatttatgagagcacagacgaagtttcattttgctgtgatttttgac
acgagtaagctctctggagaaaacgaaacattgcaattcttggttcaagcaaagagcgcc
aatccagagcacaaactttacgacaactttttagatctttccatccctctgatccacgag
accgacaccaccctcactggaatggtaacgccgagctcctttgtgtatggaaacaccatc
gacgcctcacgctttgttcagttggaagatatggaatgcaactttcagcctctgaatctg
actttccaggcgataaacaaggggcccagccggctgcctggctccacagtggacatcaga
atacctaatcggttggctggcagtggacctgacatgttccacgttattgaaactcaggtg
gctgatggtcggggaaactgcaccccccacaggaatcccaccccatgcaccatcccccag
gacaaagagagcatcttccactccatattttcatttttcaccaaatcaggccgcaaagtt
ttggactgtgaccgacctggaagagcatgtatgaccatcacctgcactttggggccacag
ttcatagatgaagctctgagcatagatctaaagcttctcctcaacacggagattctgaaa
cgagacagttcctccgtcatccagtttgtgaccagaggtagcgtgcaagtaaacaacagg
gcagcggaggtcccgaacggcctgcaaaatgacatttctctggtgtttgaggcgctgcac
agtcaagagccgcgaggttacgtggttggctggatcatcgccatcagccttctagtggga
atcctcatctttttgctgttagccgtactactctggaagatgggattcttccgtcggcgc
tacagagagatcattgaggccgagaagaaccggaacgacagcgatgaaagctgggactgg
atggagaagagccactga
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integrated database retrieval system