KEGG   Oryzias melastigma (Indian medaka): 112161424
Entry
112161424         CDS       T07439                                 
Symbol
itga9
Name
(RefSeq) integrin alpha-9
  KO
K06585  integrin alpha 9
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04510  Focal adhesion
oml04512  ECM-receptor interaction
oml04514  Cell adhesion molecule (CAM) interaction
oml04518  Integrin signaling
oml04810  Regulation of actin cytoskeleton
oml04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oml00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    112161424 (itga9)
   04514 Cell adhesion molecule (CAM) interaction
    112161424 (itga9)
   04518 Integrin signaling
    112161424 (itga9)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    112161424 (itga9)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    112161424 (itga9)
   04810 Regulation of actin cytoskeleton
    112161424 (itga9)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oml04515]
    112161424 (itga9)
Cell adhesion molecules [BR:oml04515]
 Integrins
  Integrin alpha subunits
   112161424 (itga9)
SSDB
Motif
Pfam: Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP Integrin_A_Ig_3 FG-GAP_3 FG-GAP_2 Integrin_alpha
Other DBs
NCBI-GeneID: 112161424
NCBI-ProteinID: XP_024152278
Ensembl: ENSOMEG00000001313
UniProt: A0A3B3CXV5
LinkDB
Position
LG15:25560005..25617798
AA seq 1025 aa
MPHPKGHITGLHHVFYVCLSFSVAYSYNIDLEHPLVFRGPQSSFFGYSVLEHYHDNTRWV
IVGAPRANSSYSGSVRSPGAVYKCRVHSNPERRCTEMDLGRGNKPRETCGKTCQGDRDDE
WMGVSLARQDRADGKILACAHRWKNVYYAAEHILPHGYCAIIPESLQGRTKPLIPCYEDH
KQKYGEEHGSCQAGIAGVFTEELVVMGAPGSYYWTGTIKVYNLTSDSFYSPRDSIDSHGY
SYLGYAVAAGHFSSPNVIDIAAGAPQHSGVGKVYIFKIEDPFLVKSFQASGKMMGSYFGS
SLCAVDLNQDGLSDLLVGAPMHSQLRDEGQVSVYLSKGNGVMEEHAVLTGDNAFNAHFGE
SIAAIGDIDDDGYQDIAIGAPKEDDYAGAVYIYHGGATGITQTYSMKLSGRSLNPGLQMF
GQSISGSVDMDGNGYKDVTIGAFMADSVVMLRSRPVVTVDVSIFLPVSINISVPQCHEGH
QNLNCFNATVCMRFRGRQLPGQIELLYNLTADADKRQKSQPGRVYFVQSGSQISQMSQQL
SLDINREECQHYTAFVKKDVKDVFTAITFEVAYSLGRHALAGHSDPELPALTPVLRWRKG
NKIAVRNQTWFEKNCLSDDCAADLRLHGKLLLSGLHVKPHLALGAVRNVSLNITISNAGD
DAYDTNIHFNFSREVFYINFWQKEDKGISCALVDLDFLVCRVGFPFMRAQTKFHFAVIFD
TSKLSGENETLQFLVQAKSANPEHKLYDNFLDLSIPLIHETDTTLTGMVTPSSFVYGNTI
DASRFVQLEDMECNFQPLNLTFQAINKGPSRLPGSTVDIRIPNRLAGSGPDMFHVIETQV
ADGRGNCTPHRNPTPCTIPQDKESIFHSIFSFFTKSGRKVLDCDRPGRACMTITCTLGPQ
FIDEALSIDLKLLLNTEILKRDSSSVIQFVTRGSVQVNNRAAEVPNGLQNDISLVFEALH
SQEPRGYVVGWIIAISLLVGILIFLLLAVLLWKMGFFRRRYREIIEAEKNRNDSDESWDW
MEKSH
NT seq 3078 nt   +upstreamnt  +downstreamnt
atgcctcatccaaagggacacataacgggactacaccacgtattttatgtttgtctctcc
ttttcagtggcgtattcctataatatagacttggaacatcctttggtgttccgcggacct
cagtctagtttttttggctactccgtgctggaacattatcatgacaacacacgctgggtg
atagttggagcgccccgggcgaactcttcctacagcggctcggtgcgctctcctggcgcg
gtgtacaagtgccgagttcacagcaaccctgagcgccgctgcacagagatggatctgggg
agaggaaacaagccccgggagacgtgtgggaagacctgccaaggagaccgggatgatgag
tggatgggggtcagcctggcccgtcaggacagagccgacggcaaaatactggcctgtgcc
caccgctggaagaacgtgtactacgccgcggaacacatcctgccacacggatactgcgcc
atcatccctgaatcgcttcagggcaggaccaaaccgcttatcccttgttatgaagaccat
aagcagaagtatggggaagagcatggctcgtgccaagctgggatagcaggagtcttcaca
gaggagctggtggtgatgggggctccggggtcctactattggactgggaccatcaaagtg
tacaatctgacgtctgactccttctacagccccagggacagcatcgactctcatggatac
agctaccttggttatgctgtggcggctggacacttctcctcccctaatgtgatagacatc
gctgcaggggcgcctcagcacagcggcgttggaaaagtttacattttcaaaatcgaagat
ccatttttggtgaagagttttcaagcctcagggaaaatgatgggctcttactttggctcc
tcattgtgtgcagttgatctgaaccaggatggcctgtcagacctgctggtgggggcaccc
atgcacagccagctccgggatgagggccaagtgtctgtgtacctcagcaagggcaatggc
gtgatggaggagcatgcagtcttgactggtgacaatgctttcaatgcacactttggggaa
agcattgcagcaattggagacatagacgatgacggctatcaagatattgccataggggct
cctaaagaggacgactatgcaggagctgtttacatttaccatgggggagctacaggaatt
actcaaacgtactccatgaaactctctggacgcagtttaaaccctggtctgcagatgttt
ggccagtctatctctggcagtgtggacatggatggcaatggatacaaagatgtcaccatt
ggggctttcatggccgacagcgtggtgatgctgaggtcccggcctgtcgtcacagtggat
gtttccattttcctgcccgtctccatcaacatctccgtgcctcagtgccacgaaggccac
cagaacctgaactgcttcaacgccacggtgtgcatgcgctttcgaggcagacagctgcca
ggacaaatagagctgttgtacaacctgacggctgatgcagacaagcggcagaagagccag
ccgggccgagtttacttcgttcagagcggatctcagatcagccagatgagccaacagctg
agtctggacatcaaccgggaggagtgtcagcactacactgccttcgtaaagaaggacgtg
aaggacgtcttcaccgccatcaccttcgaggttgcgtacagcctggggaggcacgcgctg
gccggacactcagatccggagctgccggctctgacgccggtgctgagatggaggaaagga
aacaagattgcagtgaggaatcagacctggtttgagaagaactgcctttcggacgactgc
gctgcagatctgaggcttcacgggaaactgctgctttctgggttgcatgtcaaacctcat
ttggcgcttggagcagtaaggaacgtctccctaaacatcaccatctccaacgccggagac
gacgcctacgacaccaacatccacttcaacttttccagagaggttttctacatcaacttc
tggcagaaggaagacaaggggatttcctgtgctctggttgatttagacttcctggtttgc
agagtgggatttccatttatgagagcacagacgaagtttcattttgctgtgatttttgac
acgagtaagctctctggagaaaacgaaacattgcaattcttggttcaagcaaagagcgcc
aatccagagcacaaactttacgacaactttttagatctttccatccctctgatccacgag
accgacaccaccctcactggaatggtaacgccgagctcctttgtgtatggaaacaccatc
gacgcctcacgctttgttcagttggaagatatggaatgcaactttcagcctctgaatctg
actttccaggcgataaacaaggggcccagccggctgcctggctccacagtggacatcaga
atacctaatcggttggctggcagtggacctgacatgttccacgttattgaaactcaggtg
gctgatggtcggggaaactgcaccccccacaggaatcccaccccatgcaccatcccccag
gacaaagagagcatcttccactccatattttcatttttcaccaaatcaggccgcaaagtt
ttggactgtgaccgacctggaagagcatgtatgaccatcacctgcactttggggccacag
ttcatagatgaagctctgagcatagatctaaagcttctcctcaacacggagattctgaaa
cgagacagttcctccgtcatccagtttgtgaccagaggtagcgtgcaagtaaacaacagg
gcagcggaggtcccgaacggcctgcaaaatgacatttctctggtgtttgaggcgctgcac
agtcaagagccgcgaggttacgtggttggctggatcatcgccatcagccttctagtggga
atcctcatctttttgctgttagccgtactactctggaagatgggattcttccgtcggcgc
tacagagagatcattgaggccgagaagaaccggaacgacagcgatgaaagctgggactgg
atggagaagagccactga

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