Oryzias melastigma (Indian medaka): 112161437
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Entry
112161437 CDS
T07439
Symbol
dhx32b
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112161437 (dhx32b)
Enzymes [BR:
oml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112161437 (dhx32b)
Spliceosome [BR:
oml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
112161437 (dhx32b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Motif
Other DBs
NCBI-GeneID:
112161437
NCBI-ProteinID:
XP_024152299
Ensembl:
ENSOMEG00000008273
LinkDB
All DBs
Position
LG15:complement(6248216..6260914)
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AA seq
739 aa
AA seq
DB search
MEQDAASLSGEDNFVGKSPCCSDSEALSQGDKDYADILELNQFDGLPYSSRFYKLMEERK
ELPVWRARSEFMDTLAHQQFVAVSGFAKTGRSSQIPQWCAEFGLSVQFQHGMVVCTQTHS
QQAVDLALRVADEMDVNIGHEVGYSIPLEKCCTSETVLRFCTDNTLLREMMSDPLLERYG
VVVVDQAHQRTVATDVLLGLLKDIALQRPELRVVLLSAMDPTPKQLTHLSGSEVPVIRVE
APGAGEVVYSSSGGDYFCSALRLVLEIHRSEEWGDVVVFLVTTQEIDLARDILCHEVHGL
PPHLGGLVPIAVHPGQPGSLPILGDEEAEPTRRVILTSSPNEDFFWADRSIRFVIDAGLE
KRCVFNPRIRTNSAVIQPISAAQAESRKQLTGPAGKCFRLYPKDRQLPAEARPQIVESDI
TSTVLFLKRMEISGMGHCDFIDRPDPGCLMHSLEELDYLAALDNDGNLSEMGIIMSEFPL
EPQMAKTVLASCEFDCVSEVVIIAAMLAVPSCFIDPPAELKAEASRGHVKFQHPEGDHFT
LVNIYKAFKQRQQDPYFNEEKWCQDFFLSHTALLMADALHAELTDTLRRIELPISMPAFG
SRSNTLNIKRALLAGFFMQVARDVDGSGNYFILTHKHVAQIHPLSGYGAKSPKLGLPEWV
LFHQHSFSEDNCLRTVTRITPEEFIQMTPQYFFYNLPPSESKEILQNLFNHADSECGEEK
RPSQEEQRQEPPSERCVVQ
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggacgccgccagtttaagtggagaggacaactttgtggggaaatcaccctgc
tgctctgactccgaggctctgagtcaaggagacaaagattacgccgacatcctggagctg
aatcagtttgatggacttccttattcgtctcggttttacaagctgatggaggagaggaaa
gagctgccggtgtggagagcaaggagtgaattcatggacacgctggcccatcaacagttt
gttgctgtcagtggatttgccaaaacaggaagaagttcccaaattccccagtggtgtgcc
gagttcggcctgtcagtccagttccagcatggcatggtggtctgcacccaaacccattcc
cagcaggccgtggatctcgccctgagagtggcagatgaaatggacgtgaacatcggccat
gaagtggggtacagcatccctctggagaaatgttgtaccagcgagacggtactaaggttc
tgcacggacaacactctcctcagagagatgatgtccgaccctctgctcgagcgctatggt
gtggtggtcgtggaccaggcccaccagaggaccgtcgccaccgacgtgctcctcggcctg
ctgaaggacatcgccctgcagaggccggagctgcgagtggttctcctgtcagccatggat
cccacccccaagcagctgacccacctgtcggggtcagaggtccccgtgatccgcgttgaa
gcgccgggagcaggggaggtggtgtacagcagctccggcggcgactacttctgctcggct
ttgcggctggttctggagatccatcgctctgaggagtggggcgatgtggttgtgtttctg
gtcacgacacaggaaatagatctggcccgtgacatcctgtgtcacgaagttcacggctta
ccccctcacctgggtgggttggttcctattgcggtgcatcccggccaaccggggagtctt
cccattctaggggatgaggaggcggagccgacacggagagtgatcctcacgagcagcccg
aatgaagacttcttctgggcggatcgctccatcagattcgttattgatgctggtcttgag
aaaagatgtgttttcaatcccagaatcaggacaaactcagccgtcatccagccgatcagc
gcagctcaagcagagagccgcaaacagttgaccggcccagcagggaagtgttttcgtttg
tacccaaaggatagacagcttcctgctgaggctcgcccccagattgtggagtctgacatc
acctccaccgtgctcttcctcaagaggatggagatctccgggatgggtcactgcgacttc
attgacagaccagatcctggatgtttaatgcattccttggaggaactggactacctagcg
gctttagacaacgacggtaacctctccgagatgggcatcatcatgtccgagttccccctg
gagccgcagatggccaaaaccgtgctggcgtcctgcgagttcgactgcgtcagcgaggtg
gtcatcatcgctgccatgttagcagttccatcttgcttcattgacccccctgcggagctg
aaagcggaggccagcagaggtcacgtgaagttccagcacccagagggggaccacttcact
ctcgtcaacatctacaaggccttcaagcagcgccagcaggatccatactttaatgaagaa
aagtggtgtcaggacttcttcctgagccacacggctctcctgatggccgacgcgctccac
gccgagctcacagacactctgaggaggatcgagctgcccatctcgatgcccgcgtttgga
tctcgaagcaacaccctgaacataaagagagcgctgctcgctggattcttcatgcaggtt
gcacgcgatgtagacggttctggaaactattttattttgacccacaagcacgtggctcag
atccatccgctctctggatatggagccaaaagccccaaactgggtctgcctgagtgggtt
ctgttccaccaacacagcttctcagaggacaactgcctccggacggtaactcgcatcaca
ccagaagagtttattcagatgacgcctcagtactttttttataacctgccgccaagtgag
agcaaagaaatcctccaaaaccttttcaatcacgccgattcggagtgcggggaggagaag
cgtccgtcacaggaggagcaacggcaggagccgccgtcggagcgctgcgtcgttcagtga
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