Oryzias melastigma (Indian medaka): 112161442
Help
Entry
112161442 CDS
T07439
Symbol
hpse2
Name
(RefSeq) inactive heparanase-2
KO
K07965
heparanase 2 [EC:3.2.1.-]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00531
Glycosaminoglycan degradation
oml01100
Metabolic pathways
Module
oml_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
112161442 (hpse2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oml00536
]
112161442 (hpse2)
Glycosaminoglycan binding proteins [BR:
oml00536
]
Heparan sulfate / Heparin
Enzymes
112161442 (hpse2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
112161442
NCBI-ProteinID:
XP_024152309
Ensembl:
ENSOMEG00000003198
LinkDB
All DBs
Position
LG15:22327818..22389595
Genome browser
AA seq
585 aa
AA seq
DB search
MPKSSQCVSPRSSQWMASLTILLLQIVLSSSYSSSSAYQRPAAGGKRPGFLGRTLILLDV
NTRSPIRILNDNFLSLQLDPSIIKDGWLDFLSSKRLVTLARGLSPAFLRFGGKRTDFLQF
NNQKNLAKFRGPGPDYYLKNYEDDIVRSDIALDKQKGCKLANHPDIMLELQREKAASTQL
VLLKEQLSNIYSNITITARSLDKLYNFADCAGLHLILGLNALHRNPDNSWNTTSTLSLLK
YSAGKKYNMSWELGNEPNAYRSMKGRAVNSTQLAQDYTKLRNLLQSVRYYHRAHLFGPNA
GRPRKNAILLLDGFLKNAGSVVDAVTWQHYFVDGRVNKAEDFLKTRLLDTLTEQINKVTQ
VVNTHSPGKKVWLGGLGPAWSGGINNLSSTYAASFLWMNTLGVAAVQGVDVVLRHSFFDY
GYSHLVDQHFNPLPDYWFSLVFKQLVGPKVLAVRVAGLQRKPQPGRVIRDKLRIYAHCTS
YHNHNYVRGSITIYIINLHRSRKKIKLAGTLRNKTVHQYLLQPYGPDGLRARHVQLNGVK
LHMQDSETFPELKPKTLRAGRTIAMPPLTIGFYVIKNINAYACRR
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaatcctcacagtgcgtatccccccggtcctcccagtggatggcatctttgacc
attctgttgctgcagattgtgctttcttcctcgtactcttcctcctctgcgtatcagaga
cctgcggctggcgggaagcgaccgggcttcttgggaagaacgctgattcttctggatgtc
aacacccgcagtccgatcagaatcctcaacgacaacttcctctcgttgcagctggacccc
tcgatcatcaaagacggttggctggactttctaagctcgaagcggctcgtcaccctggcg
cgcggcctgtcgcctgcttttcttcgctttggcggaaagagaaccgacttcctgcagttc
aacaaccagaagaacctcgccaagttcagaggacctgggccggactattatctgaagaac
tacgaggacgacatagtgcgcagtgacattgccctggacaaacagaagggctgcaaactg
gccaaccatcctgacataatgttggagctgcagagggagaaggcggcgtccacgcagctc
gtcctgctgaaagagcagctgtccaacatctacagtaacataacaataacagccaggtct
ttagacaaactctacaactttgccgactgtgctggtctgcacctgatcctgggtctcaac
gcgctgcaccgaaaccccgacaactcctggaacaccacctccaccctcagcctcctcaaa
tacagcgctggcaagaagtacaacatgtcctgggagctgggcaatgagccgaacgcctac
cgcagcatgaagggccgtgcagtcaacagcacacagctggctcaagactacaccaaacta
cgaaacctgctgcagtccgtgcggtattaccatcgagctcacctcttcggccccaacgca
gggcgaccccggaagaatgccatcctgctgctggacgggttcctgaagaatgccggctct
gtcgtagatgcagttacgtggcaacattattttgtagatggcagagtgaacaaagctgag
gatttcctaaaaacccgcctgctggacacgctaacagagcagattaataaagtcacccag
gtggtaaacacacactctccgggtaagaaagtgtggctgggtggactggggccagcgtgg
tcaggaggcattaataatctctctagcacatatgcagccagctttctctggatgaacacg
ctcggcgttgctgctgtgcagggagttgatgttgttttgcgtcactccttcttcgactat
ggctactctcaccttgtggaccagcattttaaccctttaccggattattggttttctctg
gtcttcaagcagctggttggtccaaaagttttagctgtccgtgtggcgggactgcagagg
aagccgcaaccaggacgagtcatacgcgacaagctacggatctacgcccattgcaccagc
taccacaatcacaactatgtgagggggtcgataacaatttacatcatcaacttgcatcgg
tcgagaaagaaaatcaagttggctggaacgttacggaacaaaacggtgcatcagtacctt
ctgcagccctacggtccagatgggctccgagccagacatgtccagttgaacggagtgaag
ctccacatgcaggacagtgagacgttcccagaactgaagcctaaaactctgagggccgga
cgaactatagcgatgcctcctttgaccataggcttttacgtgatcaaaaacatcaacgcg
tatgcttgtcgacgataa
DBGET
integrated database retrieval system